tRNA genes clustered and arranged according to each identical group

Marine Viruses from Arctic Ocean (SRP000129)

Anticodon = CGA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.37984 (1 seq.)
>SRA1000177 SRR001036.271529 Marine Viruses from Arctic Ocean (SRP000129) 91 1 - Ser CGA [SRA]
Identical group No.46062 (130 seq.)
>W1710864890 LMGF01000005 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 1615422 1615511 + Ser CGA [ENA] ¡û
>W1710865025 LMGI01000003 Alphaproteobacteria Sphingopyxis sp. Root154 [LMGI] 737023 737112 + Ser CGA [ENA] ¡û
>W1710867435 LMIG01000005 Alphaproteobacteria Sphingopyxis sp. Root214 [LMIG] 736848 736937 + Ser CGA [ENA] ¡û
>W1710912526 LNRR01000006 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 191632 191543 - Ser CGA [ENA] ¡û
>W1710912572 LNRS01000005 Alphaproteobacteria Sphingopyxis sp. H012 [LNRS] 191183 191094 - Ser CGA [ENA] ¡û
>W1710912620 LNRT01000009 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 214067 214156 + Ser CGA [ENA] ¡û
>W1710912662 LNRU01000006 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 222067 221978 - Ser CGA [ENA] ¡û
>W1710912717 LNRV01000022 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 25672 25583 - Ser CGA [ENA] ¡û
>W1710912735 LNRW01000004 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 191669 191580 - Ser CGA [ENA] ¡û
>W1710912777 LNRX01000003 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 131486 131575 + Ser CGA [ENA] ¡û
>W1710912822 LNRY01000003 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 191592 191503 - Ser CGA [ENA] ¡û
>W1710912869 LNRZ01000002 Alphaproteobacteria Sphingopyxis sp. H050 [LNRZ] 413317 413406 + Ser CGA [ENA] ¡û
>W1710912907 LNSA01000001 Alphaproteobacteria Sphingopyxis sp. H115 [LNSA] 169707 169796 + Ser CGA [ENA] ¡û
>W1710912960 LNSB01000009 Alphaproteobacteria Sphingopyxis sp. HIX [LNSB] 1772 1683 - Ser CGA [ENA] ¡û
>W1710913014 LNSC01000025 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 58247 58336 + Ser CGA [ENA] ¡û
>W1710913068 LNSD01000009 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 148437 148348 - Ser CGA [ENA] ¡û
>W1710913114 LNSE01000009 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 148438 148349 - Ser CGA [ENA] ¡û
>W1710913157 LNSF01000007 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 148438 148349 - Ser CGA [ENA] ¡û
>W1710913209 LNSG01000009 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 148438 148349 - Ser CGA [ENA] ¡û
>W1710913241 LNSH01000009 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 148439 148350 - Ser CGA [ENA] ¡û
>W1710913289 LNSI01000007 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 148438 148349 - Ser CGA [ENA] ¡û
>W1710913314 LNSJ01000001 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 369025 368936 - Ser CGA [ENA] ¡û
>W1710913377 LNSK01000002 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 158681 158592 - Ser CGA [ENA] ¡û
>W1711127859 LURA01000079 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 21630 21719 + Ser CGA [ENA] ¡û
>W1711127893 LURB01000052 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 5557 5468 - Ser CGA [ENA] ¡û
>W1711127926 LURC01000422 Alphaproteobacteria Sphingopyxis sp. REDSEA-S24_B7 [LURC] 154 65 - Ser CGA [ENA] ¡û
>W1711127968 LURE01000039 Alphaproteobacteria Sphingopyxis sp. REDSEA-S29_B3 [LURE] 33645 33734 + Ser CGA [ENA] ¡û
>W1711127969 LURF01000024 Alphaproteobacteria Sphingopyxis sp. REDSEA-S34_B10 [LURF] 2532 2621 + Ser CGA [ENA] ¡û
>W1711127988 LURG01000003 Alphaproteobacteria Sphingopyxis sp. REDSEA-S38_B16 [LURG] 3921 3832 - Ser CGA [ENA] ¡û
>W1711128015 LURH01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S40_B6 [LURH] 14074 14163 + Ser CGA [ENA] ¡û
>W1711128071 LURI01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S42_B3 [LURI] 952680 952591 - Ser CGA [ENA] ¡û
>W1711259783 LYVN01000055 Alphaproteobacteria Sphingopyxis sp. KK2 [LYVN] 7197 7286 + Ser CGA [ENA] ¡û
>W1711386421 MEFH01000079 Alphaproteobacteria Sphingopyxis sp. SCN 67-31 [MEFH] 25162 25073 - Ser CGA [ENA] ¡û
>W1711503946 MKUC01000012 Alphaproteobacteria Sphingopyxis sp. 65-8 [MKUC] 19578 19667 + Ser CGA [ENA] ¡û
>W1712105753 NISJ01000001 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 537771 537860 + Ser CGA [ENA] ¡û
>W1712105828 NISK01000003 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 423779 423868 + Ser CGA [ENA] ¡û
>C171094557 CP019449 Alphaproteobacteria Sphingopyxis sp. QXT-31 [CP019449] 1263362 1263451 + Ser CGA - ¡û
>C171128438 LT598653 Alphaproteobacteria uncultured Sphingopyxis sp. [LT598653] 1867557 1867468 - Ser CGA - ¡û
>W131100418 AOUN01000006 Alphaproteobacteria Sphingopyxis sp. MC1 [AOUN] 8949 9038 + Ser CGA [ENA] ¡û
>WENV180039589 LLBY010100227 [LLBY] soil metagenome; soil from tomato rhizosphere 6805 6716 - Ser CGA [ENA] ¢þ
>WENV180285872 OBID01781033 [OBID] metagenome; sludge 102 13 - Ser CGA [ENA] ¢þ
>WENV180694659 OCZS012538066 [OCZS] soil metagenome; soil 139 50 - Ser CGA [ENA] ¢þ
>WENV181167073 OEIU01007670 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2735 2824 + Ser CGA [ENA] ¢þ
>WENV181308268 OFIS01001749 [OFIS] sludge metagenome; sludge 198 109 - Ser CGA [ENA] ¢þ
>WENV181311970 OFJB01028537 [OFJB] sludge metagenome; sludge 173 84 - Ser CGA [ENA] ¢þ
>WENV181402429 OFTY01001435 [OFTY] sludge metagenome; sludge 1085 996 - Ser CGA [ENA] ¢þ
>ENV08000176 ABLX01182112 viral fraction from Bay of British Colombia 92 3 - Ser CGA [ENA] ¡û
>ENV08000234 ABLY01066364 viral fraction from Arctic Ocean 109 20 - Ser CGA [ENA] ¡û
>ENV08000260 ABLY01135534 viral fraction from Arctic Ocean 95 6 - Ser CGA [ENA] ¡û
>WENV170596679 FUIF01009203 [FUIF] marine metagenome; marine 10840 10751 - Ser CGA [ENA] ¢þ
>WENV170708453 LNAP01083033 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 265 354 + Ser CGA [ENA] ¢þ
>WENV170727436 LULE01000083 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 64184 64095 - Ser CGA [ENA] ¢þ
>WENV170728740 LULF01000365 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 3819 3730 - Ser CGA [ENA] ¢þ
>WENV170729746 LULG01000788 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 3921 3832 - Ser CGA [ENA] ¢þ
>WENV170731977 LULI01009488 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 221 132 - Ser CGA [ENA] ¢þ
>WENV170732477 LULJ01000026 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 275323 275412 + Ser CGA [ENA] ¢þ
>WENV170734344 LULK01004119 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 2532 2621 + Ser CGA [ENA] ¢þ
>WENV170735843 LULL01016851 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 168 79 - Ser CGA [ENA] ¢þ
>WENV170736473 LULM01004670 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 621 532 - Ser CGA [ENA] ¢þ
>WENV170737512 LULO01000391 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 18837 18926 + Ser CGA [ENA] ¢þ
>WENV170738341 LULP01000011 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 33645 33734 + Ser CGA [ENA] ¢þ
>WENV170739617 LULQ01005286 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 1267 1178 - Ser CGA [ENA] ¢þ
>WENV170741212 LULS01013471 [LULS] marine metagenome; Red Sea water column Station 108 - depth 200m 197 286 + Ser CGA [ENA] ¢þ
>WENV170742103 LULU01001019 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 154 65 - Ser CGA [ENA] ¢þ
>WENV170742783 LULV01000684 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 5557 5468 - Ser CGA [ENA] ¢þ
>WENV170743469 LULW01000132 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 21630 21719 + Ser CGA [ENA] ¢þ
>WENV170759234 LUMS01007185 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 463 552 + Ser CGA [ENA] ¢þ
>WENV170759522 LUMT01000002 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 952680 952591 - Ser CGA [ENA] ¢þ
>WENV170974293 MTKY01057038 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 253 164 - Ser CGA [ENA] ¢þ
>C181133090 CP026381 Alphaproteobacteria Sphingopyxis sp. MG [CP026381] 1670722 1670633 - Ser CGA - ¡û
>C191000352 AP017603 Alphaproteobacteria Sphingopyxis sp. EG6 [AP017603] 1416832 1416921 + Ser CGA - ¡û
>C191163820 CP039250 Alphaproteobacteria Sphingopyxis sp. PAMC25046 [CP039250] 2242870 2242781 - Ser CGA - ¡û
>W1910501758 FYAT01000003 Alphaproteobacteria Sphingopyxis sp. P1IMeth2 [FYAT] 32044 32133 + Ser CGA [ENA] ¡û
>W1910744345 MIAL01000016 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL] 446671 446760 + Ser CGA [ENA] ¡û
>W1910744396 MIAM01000042 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 [MIAM] 22145 22056 - Ser CGA [ENA] ¡û
>W1910934269 NIWD01000016 Alphaproteobacteria Sphingopyxis sp. GW247-27LB [NIWD] 41711 41800 + Ser CGA [ENA] ¡û
>W1911411580 NWUR01000012 Alphaproteobacteria Sphingopyxis terrae DSM 24316 [NWUR] 310147 310058 - Ser CGA [ENA] ¡û
>W1911494307 OBKE01001744 Unclassified bacterium [OBKE] 702 791 + Ser CGA [ENA] ¡û
>SRA1000180 SRR001036.282477 Marine Viruses from Arctic Ocean (SRP000129) 95 6 - Ser CGA [SRA]
>SRA1000226 SRR001037.146473 Marine Viruses from Arctic Ocean (SRP000129) 109 20 - Ser CGA [SRA]
>W1810107947 PHFW01000001 Alphaproteobacteria Sphingopyxis lindanitolerans WS5A3p [PHFW] 248090 248179 + Ser CGA [ENA] ¡û
>C151044377 CP009122 Alphaproteobacteria Sphingopyxis fribergensis Kp5.2 [CP009122] 2053411 2053500 + Ser CGA [Ensembl] ¡û
>C151051506 CP009452 Alphaproteobacteria Sphingopyxis sp. 113P3 [CP009452] 2447998 2448087 + Ser CGA - ¡û
>W1510015781 BBRO01000001 Alphaproteobacteria Sphingopyxis sp. C-1 [BBRO] 2188100 2188189 + Ser CGA [ENA] ¡û
>W1511221164 JNFC01000023 Alphaproteobacteria Sphingopyxis sp. LC363 [JNFC] 67437 67348 - Ser CGA [ENA] ¡û
>W1511221208 JNFD01000021 Alphaproteobacteria Sphingopyxis sp. LC81 [JNFD] 373065 372976 - Ser CGA [ENA] ¡û
>WENV045410 AACY022514835 Marine microbial communities from Global Ocean Sampling (GOS) 587 496 - Ser CGA [ENA]
>C161021383 CP009429 Alphaproteobacteria Sphingopyxis macrogoltabida 203 [CP009429] 1823224 1823313 + Ser CGA [Ensembl] ¡û
>C161040494 CP012199 Alphaproteobacteria Sphingopyxis granuli TFA [CP012199] 2433055 2433144 + Ser CGA [Ensembl] ¡û
>C161043652 CP012700 Alphaproteobacteria Sphingopyxis macrogoltabida EY-1 [CP012700] 1909911 1910000 + Ser CGA [Ensembl] ¡û
>C161055614 CP013342 Alphaproteobacteria Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342] 3289994 3290083 + Ser CGA [Ensembl] ¡û
>C161055682 CP013344 Alphaproteobacteria Sphingopyxis macrogoltabida 203N [CP013344] 2175199 2175110 - Ser CGA - ¡û
>W1610071394 BCUA01000136 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 3592 3681 + Ser CGA [ENA] ¡û
>W1610077665 BCZQ01000004 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 242749 242838 + Ser CGA [ENA] ¡û
>W1610727236 LMGF01000005 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 1615422 1615511 + Ser CGA [ENA] ¡û
>W1610727371 LMGI01000003 Alphaproteobacteria Sphingopyxis sp. Root154 [LMGI] 737023 737112 + Ser CGA [ENA] ¡û
>W1610729781 LMIG01000005 Alphaproteobacteria Sphingopyxis sp. Root214 [LMIG] 736848 736937 + Ser CGA [ENA] ¡û
>W1610770885 LNRR01000006 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 191632 191543 - Ser CGA [ENA] ¡û
>W1610770931 LNRS01000005 Alphaproteobacteria Sphingopyxis sp. H012 [LNRS] 191183 191094 - Ser CGA [ENA] ¡û
>W1610770979 LNRT01000009 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 214067 214156 + Ser CGA [ENA] ¡û
>W1610771021 LNRU01000006 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 222067 221978 - Ser CGA [ENA] ¡û
>W1610771076 LNRV01000022 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 25672 25583 - Ser CGA [ENA] ¡û
>W1610771094 LNRW01000004 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 191669 191580 - Ser CGA [ENA] ¡û
>W1610771136 LNRX01000003 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 131486 131575 + Ser CGA [ENA] ¡û
>W1610771181 LNRY01000003 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 191592 191503 - Ser CGA [ENA] ¡û
>W1610771228 LNRZ01000002 Alphaproteobacteria Sphingopyxis sp. H050 [LNRZ] 413317 413406 + Ser CGA [ENA] ¡û
>W1610771266 LNSA01000001 Alphaproteobacteria Sphingopyxis sp. H115 [LNSA] 169707 169796 + Ser CGA [ENA] ¡û
>W1610771319 LNSB01000009 Alphaproteobacteria Sphingopyxis sp. HIX [LNSB] 1772 1683 - Ser CGA [ENA] ¡û
>W1610771373 LNSC01000025 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 58247 58336 + Ser CGA [ENA] ¡û
>W1610771427 LNSD01000009 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 148437 148348 - Ser CGA [ENA] ¡û
>W1610771473 LNSE01000009 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 148438 148349 - Ser CGA [ENA] ¡û
>W1610771516 LNSF01000007 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 148438 148349 - Ser CGA [ENA] ¡û
>W1610771568 LNSG01000009 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 148438 148349 - Ser CGA [ENA] ¡û
>W1610771600 LNSH01000009 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 148439 148350 - Ser CGA [ENA] ¡û
>W1610771648 LNSI01000007 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 148438 148349 - Ser CGA [ENA] ¡û
>W1610771673 LNSJ01000001 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 369025 368936 - Ser CGA [ENA] ¡û
>W1610771736 LNSK01000002 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 158681 158592 - Ser CGA [ENA] ¡û
>W1610938973 LURA01000079 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 21630 21719 + Ser CGA [ENA] ¡û
>W1610939007 LURB01000052 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 5557 5468 - Ser CGA [ENA] ¡û
>W1610939040 LURC01000422 Alphaproteobacteria Sphingopyxis sp. REDSEA-S24_B7 [LURC] 154 65 - Ser CGA [ENA] ¡û
>W1610939082 LURE01000039 Alphaproteobacteria Sphingopyxis sp. REDSEA-S29_B3 [LURE] 33645 33734 + Ser CGA [ENA] ¡û
>W1610939083 LURF01000024 Alphaproteobacteria Sphingopyxis sp. REDSEA-S34_B10 [LURF] 2532 2621 + Ser CGA [ENA] ¡û
>W1610939102 LURG01000003 Alphaproteobacteria Sphingopyxis sp. REDSEA-S38_B16 [LURG] 3921 3832 - Ser CGA [ENA] ¡û
>W1610939129 LURH01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S40_B6 [LURH] 14074 14163 + Ser CGA [ENA] ¡û
>W1610939185 LURI01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S42_B3 [LURI] 952680 952591 - Ser CGA [ENA] ¡û
>W1710068759 BCUA01000136 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 3592 3681 + Ser CGA [ENA] ¡û
>W1710075303 BCZQ01000004 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 242749 242838 + Ser CGA [ENA] ¡û
>W1710540047 FNWK01000002 Alphaproteobacteria Sphingopyxis sp. YR583 [FNWK] 650700 650789 + Ser CGA [ENA] ¡û
>W1710602874 FUYP01000003 Alphaproteobacteria Sphingopyxis flava [FUYP] 207966 207877 - Ser CGA [ENA] ¡û
>W1710609452 FXWL01000003 Alphaproteobacteria Sphingopyxis terrae ummariensis [FXWL] 310241 310152 - Ser CGA [ENA] ¡û
Identical group No.55017 (2 seq.)
>ENV08000241 ABLY01077527 viral fraction from Arctic Ocean 109 19 - Ser CGA [ENA] ¡û
>SRA1000219 SRR001037.115269 Marine Viruses from Arctic Ocean (SRP000129) 109 19 - Ser CGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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