tRNA genes clustered and arranged according to each identical group

Marine Viruses from Sargasso Sea (SRP000130)

Anticodon = TGT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.271853 (35 seq.)
>WENV180363185 OBNY01005146 [OBNY] marine metagenome; ENVO:00002010 639 566 - Thr TGT [ENA] ¢þ
>WENV180365810 OBOC01039413 [OBOC] marine metagenome; ocean water 408 335 - Thr TGT [ENA] ¢þ
>WENV180378483 OBOO01055935 [OBOO] marine metagenome; ENVO 00002150 453 380 - Thr TGT [ENA] ¢þ
>WENV180637445 OCRG01022010 [OCRG] marine metagenome; seawater 318 245 - Thr TGT [ENA] ¢þ
>ENV08000325 ABLZ01160742 viral fraction from Sargasso Sea 6 79 + Thr TGT [ENA] ¡û
>ENV08000329 ABLZ01191608 viral fraction from Sargasso Sea 6 79 + Thr TGT [ENA] ¡û
>WENV170122983 CENO01010134 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1371 1298 - Thr TGT [ENA] ¢þ
>WENV170148834 CEOA01041031 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 253 180 - Thr TGT [ENA] ¢þ
>WENV170161730 CEOL01001125 [CEOL] marine metagenome genome assembly TARA_038_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 265 338 + Thr TGT [ENA] ¢þ
>WENV170164759 CEON01021674 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 370 443 + Thr TGT [ENA] ¢þ
>WENV170188815 CEPB01086764 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 240 167 - Thr TGT [ENA] ¢þ
>WENV170193677 CEPI01001178 [CEPI] marine metagenome genome assembly TARA_041_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 117 - Thr TGT [ENA] ¢þ
>WENV170200158 CEPM01029194 [CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 239 312 + Thr TGT [ENA] ¢þ
>WENV170201511 CEPQ01026912 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 216 143 - Thr TGT [ENA] ¢þ
>WENV170207187 CEPU01051493 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 214 141 - Thr TGT [ENA] ¢þ
>WENV170436494 CEUT01059939 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 365 438 + Thr TGT [ENA] ¢þ
>WENV170458376 CEVB01072674 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 335 408 + Thr TGT [ENA] ¢þ
>WENV170460330 CEVC01140293 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 336 263 - Thr TGT [ENA] ¢þ
>WENV170460520 CEVC01158075 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 367 440 + Thr TGT [ENA] ¢þ
>WENV170505364 CEVW01055882 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 757 684 - Thr TGT [ENA] ¢þ
>WENV170509064 CEVY01000310 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 278 351 + Thr TGT [ENA] ¢þ
>WENV170509636 CEVY01048552 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210 137 - Thr TGT [ENA] ¢þ
>WENV170509847 CEVY01075121 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 280 207 - Thr TGT [ENA] ¢þ
>WENV170511366 CEVZ01076778 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 551 624 + Thr TGT [ENA] ¢þ
>WENV170518670 CEWE01151550 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 274 + Thr TGT [ENA] ¢þ
>WENV170550751 CXWF01021938 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 357 430 + Thr TGT [ENA] ¢þ
>WENV170601206 FUWD010161126 [FUWD] metagenome; unknown 350 277 - Thr TGT [ENA] ¢þ
>WENV170602559 FUWD010244446 [FUWD] metagenome; unknown 167 240 + Thr TGT [ENA] ¢þ
>WENV170605535 FUWD010504533 [FUWD] metagenome; unknown 297 224 - Thr TGT [ENA] ¢þ
>WENV170619200 FUWD013004511 [FUWD] metagenome; unknown 255 182 - Thr TGT [ENA] ¢þ
>PHG181005445 MF351863 Myoviridae Synechococcus phage Bellamy (MF351863) 24100 24173 + Thr TGT [ENA] ¡û
>SRA1000258 SRR001038.5905 Marine Viruses from Sargasso Sea (SRP000130) 6 79 + Thr TGT [SRA]
>SRA1000261 SRR001038.25131 Marine Viruses from Sargasso Sea (SRP000130) 6 79 + Thr TGT [SRA]
>WENV064547 AACY023547723 Marine microbial communities from Global Ocean Sampling (GOS) 778 702 - Thr TGT [ENA]
>WENV075072 AACY024009913 Marine microbial communities from Global Ocean Sampling (GOS) 210 134 - Thr TGT [ENA]
Identical group No.452889 (2 seq.)
>ENV08000309 ABLZ01103107 viral fraction from Sargasso Sea 96 24 - Thr TGT [ENA] ¡û
>SRA1000292 SRR001038.334617 Marine Viruses from Sargasso Sea (SRP000130) 96 24 - Thr TGT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK