tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CAC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.1760 (9 seq.)
>WENV182560527 OJDU01004350 [OJDU] seawater metagenome; Sea water 1619 1712 + Val CAC [ENA] ¢þ
>WENV183618212 OOFN01006024 [OOFN] marine metagenome; seawater 449 354 - Val CAC [ENA] ¢þ
>WENV183621858 OOFV01000141 [OOFV] marine metagenome; seawater 4293 4198 - Val CAC [ENA] ¢þ
>WENV183626597 OOGJ01000884 [OOGJ] marine metagenome; seawater 106 201 + Val CAC [ENA] ¢þ
>WENV183630254 OOGS01000437 [OOGS] marine metagenome; seawater 2983 2888 - Val CAC [ENA] ¢þ
>WENV170624696 FUWD013185212 [FUWD] metagenome; unknown 119 26 - Val CAC [ENA] ¢þ
>WENV170952824 MEHZ011616589 [MEHZ] marine metagenome; marine surface water 1150 1245 + Val CAC [ENA] ¢þ
>WENV028253 AACY021106259 Marine microbial communities from Global Ocean Sampling (GOS) 773 869 + Val CAC [ENA]
>WENV11101342 AGBE01001901 Marine metagenome, Gulf of Maine surface waters 850 757 - Val CAC [ENA] ¡û
Identical group No.1761 (31 seq.)
>WENV180049186 MPLU02041698 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 51 146 + Val CAC [ENA] ¢þ
>WENV180054383 MPLV02087114 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 24409 24504 + Val CAC [ENA] ¢þ
>WENV180059738 MPLX02129550 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 98917 98822 - Val CAC [ENA] ¢þ
>WENV180091834 MPMF02223263 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 137 42 - Val CAC [ENA] ¢þ
>WENV181379376 OFRD01000906 [OFRD] wastewater metagenome; Exp Tend CN 100WW 8678 8773 + Val CAC [ENA] ¢þ
>WENV181386064 OFRL01000496 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 5543 5448 - Val CAC [ENA] ¢þ
>WENV183795625 PVBE010185379 [PVBE] marine metagenome; water 38241 38146 - Val CAC [ENA] ¢þ
>WENV170145237 CENY01291269 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 591 496 - Val CAC [ENA] ¢þ
>WENV170286656 CERW01124077 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 279 373 + Val CAC [ENA] ¢þ
>WENV170321792 CESR01081060 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3055 2960 - Val CAC [ENA] ¢þ
>WENV170322818 CESR01167688 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 985 1079 + Val CAC [ENA] ¢þ
>WENV170324614 CESS01094975 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 8 - Val CAC [ENA] ¢þ
>WENV170395121 CEUC01083434 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 49469 49374 - Val CAC [ENA] ¢þ
>WENV170476411 CEVI01108115 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 884 978 + Val CAC [ENA] ¢þ
>WENV170500375 CEVU01009992 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 566 471 - Val CAC [ENA] ¢þ
>WENV170532975 CEWO01085184 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 357 452 + Val CAC [ENA] ¢þ
>WENV170599026 FUWD010058802 [FUWD] metagenome; unknown 101 199 + Val CAC [ENA] ¢þ
>WENV170617201 FUWD012917353 [FUWD] metagenome; unknown 293 387 + Val CAC [ENA] ¢þ
>WENV170617385 FUWD012924238 [FUWD] metagenome; unknown 553 458 - Val CAC [ENA] ¢þ
>WENV170624732 FUWD013185890 [FUWD] metagenome; unknown 761 856 + Val CAC [ENA] ¢þ
>WENV170624960 FUWD013189278 [FUWD] metagenome; unknown 4127 4032 - Val CAC [ENA] ¢þ
>WENV170633012 FUWD013390056 [FUWD] metagenome; unknown 761 856 + Val CAC [ENA] ¢þ
>WENV170633218 FUWD013392909 [FUWD] metagenome; unknown 4127 4032 - Val CAC [ENA] ¢þ
>WENV170756573 LUMP01000140 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 34853 34948 + Val CAC [ENA] ¢þ
>WENV170881398 MDTC01130362 [MDTC] marine metagenome; seawater 24379 24474 + Val CAC [ENA] ¢þ
>WENV170916294 MDTE01176196 [MDTE] marine metagenome; seawater 2422 2327 - Val CAC [ENA] ¢þ
>WENV170944790 MDUO01004028 [MDUO] marine metagenome; 30 m water sample from station 6 32 127 + Val CAC [ENA] ¢þ
>WENV037912 AACY021891171 Marine microbial communities from Global Ocean Sampling (GOS) 133 231 + Val CAC [ENA]
>WENV11101395 AGBE01002169 Marine metagenome, Gulf of Maine surface waters 2500 2406 - Val CAC [ENA] ¡û
>W1610597490 LFEW01000012 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 53671 53767 + Val CAC [ENA] ¡û
>W1610855512 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 21810 21905 + Val CAC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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