tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CGC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462697 (9 seq.)
>WENV181307117 OFIP01000108 [OFIP] marine metagenome; seawater 2461 2533 + Ala CGC [ENA] ¢þ
>WENV181315701 OFJQ01002298 [OFJQ] marine metagenome; seawater 945 873 - Ala CGC [ENA] ¢þ
>WENV181315882 OFJR01001587 [OFJR] marine metagenome; seawater 254 326 + Ala CGC [ENA] ¢þ
>WENV181316472 OFJU01004567 [OFJU] marine metagenome; seawater 62 134 + Ala CGC [ENA] ¢þ
>WENV181317135 OFJX01002280 [OFJX] marine metagenome; seawater 287 359 + Ala CGC [ENA] ¢þ
>WENV181318559 OFKA01000224 [OFKA] marine metagenome; seawater 2837 2909 + Ala CGC [ENA] ¢þ
>WENV181320150 OFKG01000579 [OFKG] marine metagenome; seawater 1714 1786 + Ala CGC [ENA] ¢þ
>WENV170294793 CESC01162213 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 849 777 - Ala CGC [ENA] ¢þ
>WENV11101291 AGBE01000142 Marine metagenome, Gulf of Maine surface waters 1495 1567 + Ala CGC [ENA] ¡û
Identical group No.659485 (22 seq.)
>WENV180053429 MPLV02015367 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1271 1199 - Ala CGC [ENA] ¢þ
>WENV180054159 MPLV02072057 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1391 1463 + Ala CGC [ENA] ¢þ
>WENV183794742 PVBE010118621 [PVBE] marine metagenome; water 630 558 - Ala CGC [ENA] ¢þ
>WENV183795208 PVBE010154772 [PVBE] marine metagenome; water 93 21 - Ala CGC [ENA] ¢þ
>WENV183804779 PVBE010958393 [PVBE] marine metagenome; water 760 688 - Ala CGC [ENA] ¢þ
>WENV183809615 PVBE011402933 [PVBE] marine metagenome; water 87 15 - Ala CGC [ENA] ¢þ
>WENV170113385 CENF01062997 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 349 421 + Ala CGC [ENA] ¢þ
>WENV170227375 CEQF01076719 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 659 587 - Ala CGC [ENA] ¢þ
>WENV170230930 CEQH01098287 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 164 235 + Ala CGC [ENA] ¢þ
>WENV170246054 CEQP01146386 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 857 786 - Ala CGC [ENA] ¢þ
>WENV170282577 CERS01191494 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 51 123 + Ala CGC [ENA] ¢þ
>WENV170286991 CERW01226539 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 487 415 - Ala CGC [ENA] ¢þ
>WENV170288904 CERX01131777 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 231 303 + Ala CGC [ENA] ¢þ
>WENV170324877 CESS01150916 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 250 - Ala CGC [ENA] ¢þ
>WENV170391625 CEUA01266826 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 388 316 - Ala CGC [ENA] ¢þ
>WENV170507476 CEVX01056310 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 64 136 + Ala CGC [ENA] ¢þ
>WENV170625577 FUWD013200885 [FUWD] metagenome; unknown 1429 1357 - Ala CGC [ENA] ¢þ
>WENV170633802 FUWD013403128 [FUWD] metagenome; unknown 1429 1357 - Ala CGC [ENA] ¢þ
>WENV170747692 LUMD01000020 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 20950 21022 + Ala CGC [ENA] ¢þ
>WENV170748571 LUME01000011 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 69401 69473 + Ala CGC [ENA] ¢þ
>WENV11101297 AGBE01000258 Marine metagenome, Gulf of Maine surface waters 338 410 + Ala CGC [ENA] ¡û
>W1610597535 LFEZ01000002 Nitrososphaerota Thaumarchaeota archaeon casp-thauma4 [LFEZ] 28875 28947 + Ala CGC [ENA] ¡û
Identical group No.659486 (6 seq.)
>WENV180356790 OBNL01029598 [OBNL] marine metagenome; ENVO:00002010 295 366 + Ala CGC [ENA] ¢þ
>WENV181321751 OFKN01003393 [OFKN] marine metagenome; seawater 1213 1142 - Ala CGC [ENA] ¢þ
>WENV181323397 OFKX01014175 [OFKX] marine metagenome; seawater 433 362 - Ala CGC [ENA] ¢þ
>WENV170952693 MEHZ011610331 [MEHZ] marine metagenome; marine surface water 94 165 + Ala CGC [ENA] ¢þ
>ENV09004298 ADKQ01003048 Marine metagenome apWin_C1 1636 1565 - Ala CGC [ENA] ¡û
>WENV11101299 AGBE01000307 Marine metagenome, Gulf of Maine surface waters 890 961 + Ala CGC [ENA] ¡û
Identical group No.659492 (30 seq.)
>WENV181329405 OFLX01000756 [OFLX] seawater metagenome; seawater 1455 1384 - Ala CGC [ENA] ¢þ
>WENV181379720 OFRD01006787 [OFRD] wastewater metagenome; Exp Tend CN 100WW 1538 1609 + Ala CGC [ENA] ¢þ
>WENV181386396 OFRL01003290 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 1086 1015 - Ala CGC [ENA] ¢þ
>WENV181392350 OFRW01033045 [OFRW] seawater metagenome; seawater 468 395 - Ala CGC [ENA] ¢þ
>WENV182560488 OJDU01002957 [OJDU] seawater metagenome; Sea water 1620 1693 + Ala CGC [ENA] ¢þ
>WENV183616349 OOED01004930 [OOED] marine metagenome; seawater 55 128 + Ala CGC [ENA] ¢þ
>WENV183618129 OOFN01000907 [OOFN] marine metagenome; seawater 195 122 - Ala CGC [ENA] ¢þ
>WENV183621848 OOFV01000069 [OOFV] marine metagenome; seawater 3790 3863 + Ala CGC [ENA] ¢þ
>WENV183626574 OOGJ01000188 [OOGJ] marine metagenome; seawater 2005 1932 - Ala CGC [ENA] ¢þ
>WENV183627083 OOGK01034489 [OOGK] marine metagenome; seawater 468 395 - Ala CGC [ENA] ¢þ
>WENV183629868 OOGQ01030452 [OOGQ] marine metagenome; seawater 94 21 - Ala CGC [ENA] ¢þ
>WENV183630219 OOGS01000090 [OOGS] marine metagenome; seawater 1612 1539 - Ala CGC [ENA] ¢þ
>WENV170274376 CERM01013372 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 389 318 - Ala CGC [ENA] ¢þ
>WENV170378994 CETV01076231 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 755 826 + Ala CGC [ENA] ¢þ
>WENV170379000 CETV01077450 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 456 385 - Ala CGC [ENA] ¢þ
>WENV170475585 CEVI01014800 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 487 416 - Ala CGC [ENA] ¢þ
>WENV170568712 FLMP01069073 [FLMP] seawater metagenome; seawater 782 709 - Ala CGC [ENA] ¢þ
>WENV170572362 FLOH01000772 [FLOH] marine metagenome; water 3302 3229 - Ala CGC [ENA] ¢þ
>WENV170598949 FUWD010056091 [FUWD] metagenome; unknown 172 101 - Ala CGC [ENA] ¢þ
>WENV170609933 FUWD011587344 [FUWD] metagenome; unknown 246 173 - Ala CGC [ENA] ¢þ
>WENV170624773 FUWD013186535 [FUWD] metagenome; unknown 758 687 - Ala CGC [ENA] ¢þ
>WENV170633049 FUWD013390584 [FUWD] metagenome; unknown 758 687 - Ala CGC [ENA] ¢þ
>WENV170763907 LWDU01024176 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 368 439 + Ala CGC [ENA] ¢þ
>WENV170953823 MEHZ011665401 [MEHZ] marine metagenome; marine surface water 3772 3845 + Ala CGC [ENA] ¢þ
>WENV11101361 AGBE01002026 Marine metagenome, Gulf of Maine surface waters 9775 9846 + Ala CGC [ENA] ¡û
>WENV11101369 AGBE01002039 Marine metagenome, Gulf of Maine surface waters 13513 13586 + Ala CGC [ENA] ¡û
>WENV000512 AACY020014911 Marine microbial communities from Global Ocean Sampling (GOS) 1393 1467 + Ala CGC [ENA]
>W1610597487 LFEW01000005 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 7546 7475 - Ala CGC [ENA] ¡û
>W1610625296 LIAK01000015 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-120910-bin56 [LIAK] 3073 3000 - Ala CGC [ENA] ¡û
>W1610625319 LIAL01000006 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 15486 15413 - Ala CGC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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