tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CGT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281137 (17 seq.)
>WENV013734 AACY020377981 Marine microbial communities from Global Ocean Sampling (GOS) 80 4 - Thr CGT [ENA]
>WENV180046378 MPLT02089618 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 127 54 - Thr CGT [ENA] ¢þ
>WENV180054046 MPLV02064708 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 281 208 - Thr CGT [ENA] ¢þ
>WENV183804388 PVBE010925960 [PVBE] marine metagenome; water 1543 1470 - Thr CGT [ENA] ¢þ
>WENV170248351 CEQQ01124211 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 603 676 + Thr CGT [ENA] ¢þ
>WENV170253445 CEQU01087562 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 759 686 - Thr CGT [ENA] ¢þ
>WENV170257542 CEQX01343266 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1178 1251 + Thr CGT [ENA] ¢þ
>WENV170268511 CERG01092142 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 169 96 - Thr CGT [ENA] ¢þ
>WENV170272072 CERK01035587 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 218 145 - Thr CGT [ENA] ¢þ
>WENV170279757 CERR01051653 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 169 96 - Thr CGT [ENA] ¢þ
>WENV170285938 CERW01036911 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 451 378 - Thr CGT [ENA] ¢þ
>WENV170488991 CEVP01034442 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1229 1302 + Thr CGT [ENA] ¢þ
>WENV170498761 CEVT01069572 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1304 1377 + Thr CGT [ENA] ¢þ
>WENV170506965 CEVX01007086 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 171 98 - Thr CGT [ENA] ¢þ
>WENV170620653 FUWD013036177 [FUWD] metagenome; unknown 640 713 + Thr CGT [ENA] ¢þ
>WENV170628800 FUWD013253462 [FUWD] metagenome; unknown 640 713 + Thr CGT [ENA] ¢þ
>WENV11101340 AGBE01001883 Marine metagenome, Gulf of Maine surface waters 1702 1629 - Thr CGT [ENA] ¡û
Identical group No.281142 (43 seq.)
>A171007053 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 266346 266420 + Thr CGT - ¡û
>WENV180053650 MPLV02032368 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 843 770 - Thr CGT [ENA] ¢þ
>WENV180054892 MPLV02119855 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 4592 4519 - Thr CGT [ENA] ¢þ
>WENV180115444 OAPT01002037 [OAPT] marine metagenome; seawater 35 108 + Thr CGT [ENA] ¢þ
>WENV180595138 OCPB01024942 [OCPB] marine metagenome; ENVO:00002149 306 232 - Thr CGT [ENA] ¢þ
>WENV181092581 OEBK01010790 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 315 242 - Thr CGT [ENA] ¢þ
>WENV181318642 OFKA01003798 [OFKA] marine metagenome; seawater 780 853 + Thr CGT [ENA] ¢þ
>WENV181323267 OFKX01002678 [OFKX] marine metagenome; seawater 319 392 + Thr CGT [ENA] ¢þ
>WENV183797030 PVBE010298800 [PVBE] marine metagenome; water 6243 6316 + Thr CGT [ENA] ¢þ
>WENV170113560 CENF01081046 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1485 1558 + Thr CGT [ENA] ¢þ
>WENV170145704 CENZ01005377 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2082 2155 + Thr CGT [ENA] ¢þ
>WENV170154602 CEOF01210774 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2754 2827 + Thr CGT [ENA] ¢þ
>WENV170168046 CEOP01056557 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 608 535 - Thr CGT [ENA] ¢þ
>WENV170272219 CERK01054625 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1594 1667 + Thr CGT [ENA] ¢þ
>WENV170286142 CERW01057448 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 127 - Thr CGT [ENA] ¢þ
>WENV170325141 CESS01200172 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 388 + Thr CGT [ENA] ¢þ
>WENV170475618 CEVI01017676 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 879 952 + Thr CGT [ENA] ¢þ
>WENV170493342 CEVQ01355708 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2646 2573 - Thr CGT [ENA] ¢þ
>WENV170502531 CEVV01002948 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1262 1189 - Thr CGT [ENA] ¢þ
>WENV170505214 CEVW01039043 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1557 1630 + Thr CGT [ENA] ¢þ
>WENV170507475 CEVX01056184 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1270 1197 - Thr CGT [ENA] ¢þ
>WENV170532552 CEWO01050569 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 607 533 - Thr CGT [ENA] ¢þ
>WENV170532749 CEWO01066493 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 764 690 - Thr CGT [ENA] ¢þ
>WENV170599065 FUWD010060939 [FUWD] metagenome; unknown 218 291 + Thr CGT [ENA] ¢þ
>WENV170599069 FUWD010060993 [FUWD] metagenome; unknown 269 342 + Thr CGT [ENA] ¢þ
>WENV170599134 FUWD010064337 [FUWD] metagenome; unknown 448 522 + Thr CGT [ENA] ¢þ
>WENV170616805 FUWD012903613 [FUWD] metagenome; unknown 766 692 - Thr CGT [ENA] ¢þ
>WENV170616806 FUWD012903614 [FUWD] metagenome; unknown 252 178 - Thr CGT [ENA] ¢þ
>WENV170617361 FUWD012923482 [FUWD] metagenome; unknown 2999 2926 - Thr CGT [ENA] ¢þ
>WENV170620062 FUWD013025108 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA] ¢þ
>WENV170620075 FUWD013025380 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA] ¢þ
>WENV170628191 FUWD013243045 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA] ¢þ
>WENV170628202 FUWD013243285 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA] ¢þ
>WENV170750173 LUMG01000699 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 3365 3292 - Thr CGT [ENA] ¢þ
>WENV170756713 LUMP01000638 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 13618 13545 - Thr CGT [ENA] ¢þ
>WENV170764651 LWDU01032905 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 5106 5179 + Thr CGT [ENA] ¢þ
>WENV170804101 MDSW01041398 [MDSW] marine metagenome; seawater 392 318 - Thr CGT [ENA] ¢þ
>WENV170806795 MDSW01087088 [MDSW] marine metagenome; seawater 1053 979 - Thr CGT [ENA] ¢þ
>WENV170808070 MDSW01108658 [MDSW] marine metagenome; seawater 491 418 - Thr CGT [ENA] ¢þ
>WENV170914544 MDTE01149893 [MDTE] marine metagenome; seawater 1737 1664 - Thr CGT [ENA] ¢þ
>WENV11101377 AGBE01002111 Marine metagenome, Gulf of Maine surface waters 14746 14672 - Thr CGT [ENA] ¡û
>WENV006241 AACY020170643 Marine microbial communities from Global Ocean Sampling (GOS) 17 93 + Thr CGT [ENA]
>W1610855518 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 168317 168244 - Thr CGT [ENA] ¡û
Identical group No.281143 (17 seq.)
>WENV181320659 OFKI01005932 [OFKI] marine metagenome; seawater 343 416 + Thr CGT [ENA] ¢þ
>WENV181321700 OFKN01001181 [OFKN] marine metagenome; seawater 638 565 - Thr CGT [ENA] ¢þ
>WENV181392459 OFRW01052929 [OFRW] seawater metagenome; seawater 324 397 + Thr CGT [ENA] ¢þ
>WENV182560518 OJDU01003743 [OJDU] seawater metagenome; Sea water 1704 1631 - Thr CGT [ENA] ¢þ
>WENV183616673 OOED01123050 [OOED] marine metagenome; seawater 271 344 + Thr CGT [ENA] ¢þ
>WENV183618197 OOFN01004510 [OOFN] marine metagenome; seawater 638 565 - Thr CGT [ENA] ¢þ
>WENV183626599 OOGJ01001112 [OOGJ] marine metagenome; seawater 360 433 + Thr CGT [ENA] ¢þ
>WENV183627189 OOGK01055353 [OOGK] marine metagenome; seawater 324 397 + Thr CGT [ENA] ¢þ
>WENV183630295 OOGS01001458 [OOGS] marine metagenome; seawater 388 461 + Thr CGT [ENA] ¢þ
>WENV170297499 CESE01155275 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 127 54 - Thr CGT [ENA] ¢þ
>WENV170571876 FLOH01000351 [FLOH] marine metagenome; water 17909 17836 - Thr CGT [ENA] ¢þ
>WENV170619981 FUWD013023929 [FUWD] metagenome; unknown 539 466 - Thr CGT [ENA] ¢þ
>WENV170628114 FUWD013241957 [FUWD] metagenome; unknown 539 466 - Thr CGT [ENA] ¢þ
>WENV170953797 MEHZ011664133 [MEHZ] marine metagenome; marine surface water 1919 1846 - Thr CGT [ENA] ¢þ
>ENV09004263 ADKQ01000115 Marine metagenome apWin_C1 809 736 - Thr CGT [ENA] ¡û
>WENV11101388 AGBE01002140 Marine metagenome, Gulf of Maine surface waters 40533 40460 - Thr CGT [ENA] ¡û
>W1610625326 LIAL01000013 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 15676 15603 - Thr CGT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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