tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = GAG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.88082 (51 seq.)
>A171000235 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 281500 281586 + Leu GAG - ¡û
>A171003393 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 247667 247753 + Leu GAG - ¡û
>A171005915 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 602905 602991 + Leu GAG - ¡û
>A171006031 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1551255 1551170 - Leu GAG - ¡û
>A171007068 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1102688 1102603 - Leu GAG - ¡û
>WENV180049477 MPLU02062209 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 1667 1752 + Leu GAG [ENA] ¢þ
>WENV180054736 MPLV02110201 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 235 320 + Leu GAG [ENA] ¢þ
>WENV180115488 OAPT01003946 [OAPT] marine metagenome; seawater 526 439 - Leu GAG [ENA] ¢þ
>WENV180360432 OBNT01096552 [OBNT] marine metagenome; Sea Water 167 252 + Leu GAG [ENA] ¢þ
>WENV180595020 OCPB01003000 [OCPB] marine metagenome; ENVO:00002149 489 404 - Leu GAG [ENA] ¢þ
>WENV001697 AACY020048255 Marine microbial communities from Global Ocean Sampling (GOS) 1061 1150 + Leu GAG [ENA]
>WENV181092411 OEBK01000376 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1631 1544 - Leu GAG [ENA] ¢þ
>WENV181403024 OFTZ01013707 [OFTZ] marine metagenome; seawater 355 441 + Leu GAG [ENA] ¢þ
>WENV170115087 CENF01400962 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 698 611 - Leu GAG [ENA] ¢þ
>WENV170144571 CENY01160584 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 779 692 - Leu GAG [ENA] ¢þ
>WENV170146172 CENZ01037949 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 238 151 - Leu GAG [ENA] ¢þ
>WENV170154030 CEOF01163394 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6985 7072 + Leu GAG [ENA] ¢þ
>WENV170228317 CEQG01000464 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 709 796 + Leu GAG [ENA] ¢þ
>WENV170242250 CEQO01042805 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 545 458 - Leu GAG [ENA] ¢þ
>WENV170262913 CERC01004567 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2071 2158 + Leu GAG [ENA] ¢þ
>WENV170266031 CERE01032603 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1382 1468 + Leu GAG [ENA] ¢þ
>WENV170271902 CERK01018008 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3042 3129 + Leu GAG [ENA] ¢þ
>WENV170282676 CERS01259994 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 300 213 - Leu GAG [ENA] ¢þ
>WENV170289586 CERX01197748 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 388 475 + Leu GAG [ENA] ¢þ
>WENV170325159 CESS01201293 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1576 1489 - Leu GAG [ENA] ¢þ
>WENV170477431 CEVJ01072743 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 224 311 + Leu GAG [ENA] ¢þ
>WENV170502946 CEVV01037933 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 737 650 - Leu GAG [ENA] ¢þ
>WENV170506993 CEVX01009510 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1233 1320 + Leu GAG [ENA] ¢þ
>WENV170538417 CEWR01079589 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 253 167 - Leu GAG [ENA] ¢þ
>WENV170617417 FUWD012925736 [FUWD] metagenome; unknown 2153 2240 + Leu GAG [ENA] ¢þ
>WENV170617418 FUWD012925737 [FUWD] metagenome; unknown 184 271 + Leu GAG [ENA] ¢þ
>WENV170617419 FUWD012925738 [FUWD] metagenome; unknown 39 126 + Leu GAG [ENA] ¢þ
>WENV170701376 LKGT01008089 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 8450 8536 + Leu GAG [ENA] ¢þ
>WENV170701536 LKGT01010468 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 3414 3500 + Leu GAG [ENA] ¢þ
>WENV170750185 LUMG01000870 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 2348 2435 + Leu GAG [ENA] ¢þ
>WENV170756520 LUMP01000058 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 5542 5455 - Leu GAG [ENA] ¢þ
>WENV170905007 MDTE01019996 [MDTE] marine metagenome; seawater 1584 1497 - Leu GAG [ENA] ¢þ
>W1910572964 JNVL01000010 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 66124 66038 - Leu GAG [ENA] ¡û
>W1910572983 JOKN01000003 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 44785 44871 + Leu GAG [ENA] ¡û
>W1910573210 JOSY01000007 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 16488 16574 + Leu GAG [ENA] ¡û
>W1910573256 JOTA01000022 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 6140 6226 + Leu GAG [ENA] ¡û
>W1910573300 JOTD01000034 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 16510 16596 + Leu GAG [ENA] ¡û
>WENV11101313 AGBE01000912 Marine metagenome, Gulf of Maine surface waters 2641 2728 + Leu GAG [ENA] ¡û
>WENV11101320 AGBE01001181 Marine metagenome, Gulf of Maine surface waters 978 891 - Leu GAG [ENA] ¡û
>W1610000540 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1187376 1187462 + Leu GAG [ENA] ¡û
>W1610005409 AJVI01000006 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 49491 49577 + Leu GAG [ENA] ¡û
>W1610005434 AJVJ01000016 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 56329 56415 + Leu GAG [ENA] ¡û
>W1610029903 AXWL01000013 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 11093 11179 + Leu GAG [ENA] ¡û
>WENV069891 AACY023787930 Marine microbial communities from Global Ocean Sampling (GOS) 315 226 - Leu GAG [ENA]
>W1610617255 LGTD01000466 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 330 417 + Leu GAG [ENA] ¡û
>W1610855526 LQMW01000019 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 110563 110476 - Leu GAG [ENA] ¡û
Identical group No.88084 (20 seq.)
>WENV001013 AACY020030979 Marine microbial communities from Global Ocean Sampling (GOS) 2112 2201 + Leu GAG [ENA]
>WENV181307171 OFIP01002389 [OFIP] marine metagenome; seawater 560 473 - Leu GAG [ENA] ¢þ
>WENV181309237 OFIV01000015 [OFIV] marine metagenome; seawater 1281 1368 + Leu GAG [ENA] ¢þ
>WENV181315718 OFJQ01003160 [OFJQ] marine metagenome; seawater 301 388 + Leu GAG [ENA] ¢þ
>WENV181315862 OFJR01000538 [OFJR] marine metagenome; seawater 696 609 - Leu GAG [ENA] ¢þ
>WENV181316432 OFJU01001722 [OFJU] marine metagenome; seawater 256 169 - Leu GAG [ENA] ¢þ
>WENV181317153 OFJX01003205 [OFJX] marine metagenome; seawater 590 503 - Leu GAG [ENA] ¢þ
>WENV181318565 OFKA01000343 [OFKA] marine metagenome; seawater 253 166 - Leu GAG [ENA] ¢þ
>WENV181320145 OFKG01000473 [OFKG] marine metagenome; seawater 2235 2322 + Leu GAG [ENA] ¢þ
>WENV181320889 OFKI01041720 [OFKI] marine metagenome; seawater 363 450 + Leu GAG [ENA] ¢þ
>WENV170286527 CERW01105813 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 239 326 + Leu GAG [ENA] ¢þ
>WENV170322558 CESR01154582 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 385 472 + Leu GAG [ENA] ¢þ
>WENV170487152 CEVO01030621 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 195 + Leu GAG [ENA] ¢þ
>WENV170600096 FUWD010106782 [FUWD] metagenome; unknown 753 840 + Leu GAG [ENA] ¢þ
>WENV170616351 FUWD012885655 [FUWD] metagenome; unknown 1000 1087 + Leu GAG [ENA] ¢þ
>WENV170616352 FUWD012885656 [FUWD] metagenome; unknown 283 370 + Leu GAG [ENA] ¢þ
>WENV170616353 FUWD012885657 [FUWD] metagenome; unknown 72 159 + Leu GAG [ENA] ¢þ
>WENV170616701 FUWD012900060 [FUWD] metagenome; unknown 349 436 + Leu GAG [ENA] ¢þ
>WENV170617544 FUWD012929394 [FUWD] metagenome; unknown 422 335 - Leu GAG [ENA] ¢þ
>WENV11101346 AGBE01001910 Marine metagenome, Gulf of Maine surface waters 14888 14975 + Leu GAG [ENA] ¡û
Identical group No.88085 (20 seq.)
>WENV181321745 OFKN01002856 [OFKN] marine metagenome; seawater 326 413 + Leu GAG [ENA] ¢þ
>WENV181323239 OFKX01000976 [OFKX] marine metagenome; seawater 573 660 + Leu GAG [ENA] ¢þ
>WENV182560434 OJDU01001013 [OJDU] seawater metagenome; Sea water 3695 3608 - Leu GAG [ENA] ¢þ
>WENV183054148 OLGR01021137 [OLGR] seawater metagenome; Sea water 472 385 - Leu GAG [ENA] ¢þ
>WENV183621950 OOFV01001226 [OOFV] marine metagenome; seawater 663 576 - Leu GAG [ENA] ¢þ
>WENV183626596 OOGJ01000875 [OOGJ] marine metagenome; seawater 1171 1258 + Leu GAG [ENA] ¢þ
>WENV183630344 OOGS01004725 [OOGS] marine metagenome; seawater 741 654 - Leu GAG [ENA] ¢þ
>WENV170566753 FLLY01001599 [FLLY] seawater metagenome; seawater 552 639 + Leu GAG [ENA] ¢þ
>WENV170570484 FLOH01000006 [FLOH] marine metagenome; water 1174656 1174569 - Leu GAG [ENA] ¢þ
>WENV170572662 FLOH01001127 [FLOH] marine metagenome; water 13121 13034 - Leu GAG [ENA] ¢þ
>WENV170620458 FUWD013032163 [FUWD] metagenome; unknown 945 1032 + Leu GAG [ENA] ¢þ
>WENV170624861 FUWD013188121 [FUWD] metagenome; unknown 7268 7355 + Leu GAG [ENA] ¢þ
>WENV170628601 FUWD013249634 [FUWD] metagenome; unknown 132 45 - Leu GAG [ENA] ¢þ
>WENV170633127 FUWD013391918 [FUWD] metagenome; unknown 7268 7355 + Leu GAG [ENA] ¢þ
>WENV170763405 LWDU01008769 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 50 137 + Leu GAG [ENA] ¢þ
>WENV170953208 MEHZ011633916 [MEHZ] marine metagenome; marine surface water 405 318 - Leu GAG [ENA] ¢þ
>WENV11101365 AGBE01002035 Marine metagenome, Gulf of Maine surface waters 11363 11276 - Leu GAG [ENA] ¡û
>WENV056195 AACY023250939 Marine microbial communities from Global Ocean Sampling (GOS) 638 549 - Leu GAG [ENA]
>W1610625299 LIAK01000048 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-120910-bin56 [LIAK] 405 318 - Leu GAG [ENA] ¡û
>W1610625322 LIAL01000009 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 1554 1467 - Leu GAG [ENA] ¡û
Identical group No.114285 (1 seq.)
>WENV11101331 AGBE01001747 Marine metagenome, Gulf of Maine surface waters 1158 1242 + Leu GAG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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