tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = GAT

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240696 (111 seq.)
>A171003422 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 1379492 1379568 + Ile GAT - ¡û
>A171006037 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 343559 343483 - Ile GAT - ¡û
>WENV001516 AACY020042968 Marine microbial communities from Global Ocean Sampling (GOS) 1172 1249 + Ile GAT [ENA]
>WENV180041392 LLBZ010119081 [LLBZ] soil metagenome; soil from tomato rhizosphere 3460 3534 + Ile GAT [ENA] ¢þ
>WENV180048776 MPLU02008536 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 682 608 - Ile GAT [ENA] ¢þ
>WENV180049457 MPLU02060948 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 764 840 + Ile GAT [ENA] ¢þ
>WENV180050056 MPLU02107289 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 3744 3670 - Ile GAT [ENA] ¢þ
>WENV180052800 MPLU02325658 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 79 5 - Ile GAT [ENA] ¢þ
>WENV180053452 MPLV02017200 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 2282 2358 + Ile GAT [ENA] ¢þ
>WENV180054314 MPLV02082440 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 534 460 - Ile GAT [ENA] ¢þ
>WENV180054906 MPLV02120742 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 204 279 + Ile GAT [ENA] ¢þ
>WENV180063766 MPLX02374431 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 2283 2359 + Ile GAT [ENA] ¢þ
>WENV180110381 OAPM01030163 [OAPM] marine metagenome; ENVO.00002110 386 312 - Ile GAT [ENA] ¢þ
>WENV180364584 OBOA01041645 [OBOA] marine metagenome; Deep Chlorophyll Maximum 202 276 + Ile GAT [ENA] ¢þ
>WENV180372194 OBOI01043010 [OBOI] sediment metagenome; sediment 164 88 - Ile GAT [ENA] ¢þ
>WENV181307270 OFIP01009809 [OFIP] marine metagenome; seawater 494 570 + Ile GAT [ENA] ¢þ
>WENV181309234 OFIV01000007 [OFIV] marine metagenome; seawater 1319 1395 + Ile GAT [ENA] ¢þ
>WENV181315657 OFJQ01000713 [OFJQ] marine metagenome; seawater 1053 1129 + Ile GAT [ENA] ¢þ
>WENV181315991 OFJR01008873 [OFJR] marine metagenome; seawater 150 226 + Ile GAT [ENA] ¢þ
>WENV181316448 OFJU01002627 [OFJU] marine metagenome; seawater 296 220 - Ile GAT [ENA] ¢þ
>WENV181317075 OFJX01000023 [OFJX] marine metagenome; seawater 240 316 + Ile GAT [ENA] ¢þ
>WENV181320587 OFKI01001159 [OFKI] marine metagenome; seawater 1188 1264 + Ile GAT [ENA] ¢þ
>WENV181321799 OFKN01011117 [OFKN] marine metagenome; seawater 354 430 + Ile GAT [ENA] ¢þ
>WENV181329408 OFLX01000962 [OFLX] seawater metagenome; seawater 1126 1202 + Ile GAT [ENA] ¢þ
>WENV181379898 OFRD01013930 [OFRD] wastewater metagenome; Exp Tend CN 100WW 978 1054 + Ile GAT [ENA] ¢þ
>WENV181386189 OFRL01001169 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 5772 5696 - Ile GAT [ENA] ¢þ
>WENV181392542 OFRW01077951 [OFRW] seawater metagenome; seawater 69 145 + Ile GAT [ENA] ¢þ
>WENV181403386 OFUA01024464 [OFUA] marine metagenome; seawater 179 255 + Ile GAT [ENA] ¢þ
>WENV183616283 OOED01000553 [OOED] marine metagenome; seawater 371 295 - Ile GAT [ENA] ¢þ
>WENV183618274 OOFN01013886 [OOFN] marine metagenome; seawater 139 63 - Ile GAT [ENA] ¢þ
>WENV183621840 OOFV01000049 [OOFV] marine metagenome; seawater 3950 4026 + Ile GAT [ENA] ¢þ
>WENV183627272 OOGK01082278 [OOGK] marine metagenome; seawater 443 367 - Ile GAT [ENA] ¢þ
>WENV183661989 ORJL010155352 [ORJL] groundwater metagenome; groundwater 571 647 + Ile GAT [ENA] ¢þ
>WENV183680378 ORMF010171865 [ORMF] groundwater metagenome; groundwater 914 838 - Ile GAT [ENA] ¢þ
>WENV183798334 PVBE010408960 [PVBE] marine metagenome; water 2283 2359 + Ile GAT [ENA] ¢þ
>WENV183807698 PVBE011222536 [PVBE] marine metagenome; water 1247 1321 + Ile GAT [ENA] ¢þ
>WENV170113658 CENF01090871 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 714 640 - Ile GAT [ENA] ¢þ
>WENV170145194 CENY01275981 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 256 182 - Ile GAT [ENA] ¢þ
>WENV170147019 CENZ01103580 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 372 446 + Ile GAT [ENA] ¢þ
>WENV170154533 CEOF01206563 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 182 + Ile GAT [ENA] ¢þ
>WENV170231070 CEQH01117769 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 270 - Ile GAT [ENA] ¢þ
>WENV170241495 CEQN01320980 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 564 490 - Ile GAT [ENA] ¢þ
>WENV170271776 CERK01005994 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 498 572 + Ile GAT [ENA] ¢þ
>WENV170294416 CESC01072794 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 288 212 - Ile GAT [ENA] ¢þ
>WENV170297509 CESE01165093 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 353 277 - Ile GAT [ENA] ¢þ
>WENV170320655 CESR01003578 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3851 3775 - Ile GAT [ENA] ¢þ
>WENV170325102 CESS01197753 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 528 602 + Ile GAT [ENA] ¢þ
>WENV170395993 CEUC01150595 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2189 2265 + Ile GAT [ENA] ¢þ
>WENV170477031 CEVJ01022451 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 397 323 - Ile GAT [ENA] ¢þ
>WENV170477528 CEVJ01082352 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 359 283 - Ile GAT [ENA] ¢þ
>WENV170500615 CEVU01029981 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 246 + Ile GAT [ENA] ¢þ
>WENV170503009 CEVV01042708 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5436 5362 - Ile GAT [ENA] ¢þ
>WENV170507210 CEVX01026118 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 255 329 + Ile GAT [ENA] ¢þ
>WENV170531862 CEWO01002960 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 267 - Ile GAT [ENA] ¢þ
>WENV170533738 CEWO01158586 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 253 - Ile GAT [ENA] ¢þ
>WENV170534877 CEWP01003853 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 317 241 - Ile GAT [ENA] ¢þ
>WENV170538484 CEWR01085843 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 178 254 + Ile GAT [ENA] ¢þ
>WENV170566764 FLLY01001838 [FLLY] seawater metagenome; seawater 359 283 - Ile GAT [ENA] ¢þ
>WENV170569483 FLMP01214899 [FLMP] seawater metagenome; seawater 81 5 - Ile GAT [ENA] ¢þ
>WENV170569808 FLMP01310135 [FLMP] seawater metagenome; seawater 69 145 + Ile GAT [ENA] ¢þ
>WENV170570492 FLOH01000006 [FLOH] marine metagenome; water 312459 312383 - Ile GAT [ENA] ¢þ
>WENV170571872 FLOH01000351 [FLOH] marine metagenome; water 46386 46462 + Ile GAT [ENA] ¢þ
>WENV170598997 FUWD010057579 [FUWD] metagenome; unknown 1526 1450 - Ile GAT [ENA] ¢þ
>WENV170599055 FUWD010060569 [FUWD] metagenome; unknown 723 648 - Ile GAT [ENA] ¢þ
>WENV170599059 FUWD010060662 [FUWD] metagenome; unknown 30 106 + Ile GAT [ENA] ¢þ
>WENV170616462 FUWD012888738 [FUWD] metagenome; unknown 709 784 + Ile GAT [ENA] ¢þ
>WENV170616642 FUWD012895284 [FUWD] metagenome; unknown 822 748 - Ile GAT [ENA] ¢þ
>WENV170617263 FUWD012919292 [FUWD] metagenome; unknown 463 387 - Ile GAT [ENA] ¢þ
>WENV170617264 FUWD012919293 [FUWD] metagenome; unknown 342 266 - Ile GAT [ENA] ¢þ
>WENV170620413 FUWD013031286 [FUWD] metagenome; unknown 474 399 - Ile GAT [ENA] ¢þ
>WENV170620529 FUWD013033231 [FUWD] metagenome; unknown 201 276 + Ile GAT [ENA] ¢þ
>WENV170621107 FUWD013049079 [FUWD] metagenome; unknown 2104 2180 + Ile GAT [ENA] ¢þ
>WENV170622175 FUWD013090774 [FUWD] metagenome; unknown 232 156 - Ile GAT [ENA] ¢þ
>WENV170624379 FUWD013180830 [FUWD] metagenome; unknown 10909 10985 + Ile GAT [ENA] ¢þ
>WENV170624380 FUWD013180831 [FUWD] metagenome; unknown 163 239 + Ile GAT [ENA] ¢þ
>WENV170624393 FUWD013181037 [FUWD] metagenome; unknown 1324 1248 - Ile GAT [ENA] ¢þ
>WENV170627835 FUWD013238028 [FUWD] metagenome; unknown 4667 4591 - Ile GAT [ENA] ¢þ
>WENV170628555 FUWD013248814 [FUWD] metagenome; unknown 474 399 - Ile GAT [ENA] ¢þ
>WENV170628672 FUWD013250663 [FUWD] metagenome; unknown 201 276 + Ile GAT [ENA] ¢þ
>WENV170630378 FUWD013305688 [FUWD] metagenome; unknown 232 156 - Ile GAT [ENA] ¢þ
>WENV170632665 FUWD013385916 [FUWD] metagenome; unknown 10909 10985 + Ile GAT [ENA] ¢þ
>WENV170632666 FUWD013385917 [FUWD] metagenome; unknown 163 239 + Ile GAT [ENA] ¢þ
>WENV170632678 FUWD013386077 [FUWD] metagenome; unknown 1324 1248 - Ile GAT [ENA] ¢þ
>WENV170660978 JXWU01074187 [JXWU] soil metagenome; rice field; organic control Plot 87 163 + Ile GAT [ENA] ¢þ
>WENV170701339 LKGT01007066 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 1350 1426 + Ile GAT [ENA] ¢þ
>WENV170701448 LKGT01009021 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 1234 1158 - Ile GAT [ENA] ¢þ
>WENV170750095 LUMG01000186 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 3292 3366 + Ile GAT [ENA] ¢þ
>WENV170756753 LUMP01000945 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 1270 1345 + Ile GAT [ENA] ¢þ
>WENV170763462 LWDU01010353 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1554 1478 - Ile GAT [ENA] ¢þ
>WENV170763673 LWDU01016140 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1569 1493 - Ile GAT [ENA] ¢þ
>WENV170878493 MDTC01077626 [MDTC] marine metagenome; seawater 746 822 + Ile GAT [ENA] ¢þ
>WENV170945321 MDUP01006768 [MDUP] marine metagenome; 85 m water sample from station 6 1210 1134 - Ile GAT [ENA] ¢þ
>WENV170952660 MEHZ011609049 [MEHZ] marine metagenome; marine surface water 1355 1279 - Ile GAT [ENA] ¢þ
>W1910126236 BGKI01000006 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 64961 65037 + Ile GAT [ENA] ¡û
>WENV11101303 AGBE01000362 Marine metagenome, Gulf of Maine surface waters 73 149 + Ile GAT [ENA] ¡û
>WENV11101333 AGBE01001837 Marine metagenome, Gulf of Maine surface waters 958 1034 + Ile GAT [ENA] ¡û
>WENV11101386 AGBE01002138 Marine metagenome, Gulf of Maine surface waters 961 885 - Ile GAT [ENA] ¡û
>WENV11101390 AGBE01002141 Marine metagenome, Gulf of Maine surface waters 27613 27689 + Ile GAT [ENA] ¡û
>WENV056146 AACY023249428 Marine microbial communities from Global Ocean Sampling (GOS) 458 535 + Ile GAT [ENA]
>WENV057014 AACY023279841 Marine microbial communities from Global Ocean Sampling (GOS) 681 604 - Ile GAT [ENA]
>W1610002172 AEGP01000066 Nitrososphaerota Candidatus Nitrosarchaeum limnium limnia SFB1 [AEGP] 16089 16163 + Ile GAT [ENA] ¡û
>W1610003299 AFPU01000001 Nitrososphaerota Nitrosarchaeum koreense koreensis MY1 [AFPU] 1289131 1289206 + Ile GAT [ENA] ¡û
>W1610004536 AHJG01000287 Nitrososphaerota Candidatus Nitrosarchaeum limnium limnia BG20 [AHJG] 28948 28874 - Ile GAT [ENA] ¡û
>W1610005462 AJVJ01000047 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 76829 76753 - Ile GAT [ENA] ¡û
>W1610029914 AXWL01000027 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 13670 13594 - Ile GAT [ENA] ¡û
>W1610597494 LFEW01000013 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 61548 61624 + Ile GAT [ENA] ¡û
>W1610597519 LFEY01000011 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 22206 22130 - Ile GAT [ENA] ¡û
>W1610599350 LFLC01000033 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 8475 8399 - Ile GAT [ENA] ¡û
>W1610625301 LIAK01000051 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-120910-bin56 [LIAK] 2314 2238 - Ile GAT [ENA] ¡û
>W1610625333 LIAL01000053 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 4606 4530 - Ile GAT [ENA] ¡û
>W1610855516 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 196157 196232 + Ile GAT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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