tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = GTG

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.659484 (29 seq.)
>WENV181306989 OFIO01006754 [OFIO] marine metagenome; seawater 304 230 - His GTG [ENA] ¢þ
>WENV181307223 OFIP01006017 [OFIP] marine metagenome; seawater 226 300 + His GTG [ENA] ¢þ
>WENV181309288 OFIV01001372 [OFIV] marine metagenome; seawater 706 780 + His GTG [ENA] ¢þ
>WENV181315684 OFJQ01001802 [OFJQ] marine metagenome; seawater 524 596 + His GTG [ENA] ¢þ
>WENV181315904 OFJR01002634 [OFJR] marine metagenome; seawater 402 476 + His GTG [ENA] ¢þ
>WENV181317079 OFJX01000099 [OFJX] marine metagenome; seawater 1362 1436 + His GTG [ENA] ¢þ
>WENV181320225 OFKG01002837 [OFKG] marine metagenome; seawater 270 344 + His GTG [ENA] ¢þ
>WENV181320664 OFKI01006448 [OFKI] marine metagenome; seawater 587 513 - His GTG [ENA] ¢þ
>WENV181329412 OFLX01001060 [OFLX] seawater metagenome; seawater 198 124 - His GTG [ENA] ¢þ
>WENV182560452 OJDU01001540 [OJDU] seawater metagenome; Sea water 1909 1983 + His GTG [ENA] ¢þ
>WENV183616461 OOED01036712 [OOED] marine metagenome; seawater 198 124 - His GTG [ENA] ¢þ
>WENV183621964 OOFV01001383 [OOFV] marine metagenome; seawater 1858 1932 + His GTG [ENA] ¢þ
>WENV170287085 CERW01262172 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 92 166 + His GTG [ENA] ¢þ
>WENV170294168 CESC01044600 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 935 861 - His GTG [ENA] ¢þ
>WENV170298934 CESG01001254 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 307 381 + His GTG [ENA] ¢þ
>WENV170534408 CEWO01232579 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 440 514 + His GTG [ENA] ¢þ
>WENV170538694 CEWR01107043 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 282 208 - His GTG [ENA] ¢þ
>WENV170567230 FLLY01092484 [FLLY] seawater metagenome; seawater 198 124 - His GTG [ENA] ¢þ
>WENV170568583 FLMP01052925 [FLMP] seawater metagenome; seawater 198 272 + His GTG [ENA] ¢þ
>WENV170572661 FLOH01001127 [FLOH] marine metagenome; water 23919 23845 - His GTG [ENA] ¢þ
>WENV170624452 FUWD013181960 [FUWD] metagenome; unknown 2222 2148 - His GTG [ENA] ¢þ
>WENV170628600 FUWD013249634 [FUWD] metagenome; unknown 12919 12845 - His GTG [ENA] ¢þ
>WENV170763171 LWDU01003445 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 426 500 + His GTG [ENA] ¢þ
>WENV170816897 MDSX01039734 [MDSX] marine metagenome; seawater 990 1064 + His GTG [ENA] ¢þ
>WENV170953623 MEHZ011656017 [MEHZ] marine metagenome; marine surface water 1054 1128 + His GTG [ENA] ¢þ
>WENV11101295 AGBE01000220 Marine metagenome, Gulf of Maine surface waters 794 720 - His GTG [ENA] ¡û
>WENV11101364 AGBE01002035 Marine metagenome, Gulf of Maine surface waters 22161 22087 - His GTG [ENA] ¡û
>WENV056934 AACY023274664 Marine microbial communities from Global Ocean Sampling (GOS) 105 29 - His GTG [ENA]
>W1610625321 LIAL01000009 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 12352 12278 - His GTG [ENA] ¡û
Identical group No.659488 (12 seq.)
>WENV181306992 OFIO01006967 [OFIO] marine metagenome; seawater 641 567 - His GTG [ENA] ¢þ
>WENV181315941 OFJR01005066 [OFJR] marine metagenome; seawater 432 358 - His GTG [ENA] ¢þ
>WENV170228057 CEQF01187932 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 355 281 - His GTG [ENA] ¢þ
>WENV170270092 CERI01056741 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1826 1900 + His GTG [ENA] ¢þ
>WENV170294735 CESC01147820 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 629 703 + His GTG [ENA] ¢þ
>WENV170299640 CESG01048336 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 909 835 - His GTG [ENA] ¢þ
>WENV170321104 CESR01031567 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2178 2104 - His GTG [ENA] ¢þ
>WENV170478785 CEVK01093082 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 496 422 - His GTG [ENA] ¢þ
>WENV170536523 CEWP01205274 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 387 313 - His GTG [ENA] ¢þ
>WENV170620070 FUWD013025233 [FUWD] metagenome; unknown 2059 1985 - His GTG [ENA] ¢þ
>WENV170628197 FUWD013243156 [FUWD] metagenome; unknown 2059 1985 - His GTG [ENA] ¢þ
>WENV11101309 AGBE01000668 Marine metagenome, Gulf of Maine surface waters 1561 1635 + His GTG [ENA] ¡û
Identical group No.659491 (46 seq.)
>A171007067 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1113482 1113410 - His GTG - ¡û
>WENV180049725 MPLU02081372 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 13256 13328 + His GTG [ENA] ¢þ
>WENV180054481 MPLV02092565 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 17245 17173 - His GTG [ENA] ¢þ
>WENV180055996 MPLW02002584 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 256 184 - His GTG [ENA] ¢þ
>WENV180062564 MPLX02295326 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 737 810 + His GTG [ENA] ¢þ
>WENV180063756 MPLX02373798 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 85782 85854 + His GTG [ENA] ¢þ
>WENV180088242 MPMF02020166 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 1910 1837 - His GTG [ENA] ¢þ
>WENV180091861 MPMF02224777 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 91 19 - His GTG [ENA] ¢þ
>WENV181092402 OEBK01000241 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1166 1094 - His GTG [ENA] ¢þ
>WENV183794406 PVBE010095117 [PVBE] marine metagenome; water 5537 5610 + His GTG [ENA] ¢þ
>WENV183809622 PVBE011404161 [PVBE] marine metagenome; water 5987 5915 - His GTG [ENA] ¢þ
>WENV170114904 CENF01263003 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 410 482 + His GTG [ENA] ¢þ
>WENV170146590 CENZ01065764 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1022 1094 + His GTG [ENA] ¢þ
>WENV170155135 CEOF01438450 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1415 1487 + His GTG [ENA] ¢þ
>WENV170226970 CEQF01032938 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1764 1691 - His GTG [ENA] ¢þ
>WENV170266428 CERE01069429 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 115 - His GTG [ENA] ¢þ
>WENV170271943 CERK01022411 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 725 797 + His GTG [ENA] ¢þ
>WENV170273165 CERL01055880 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 572 499 - His GTG [ENA] ¢þ
>WENV170273233 CERL01063124 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 159 232 + His GTG [ENA] ¢þ
>WENV170274436 CERM01017501 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 304 376 + His GTG [ENA] ¢þ
>WENV170324532 CESS01090880 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 552 480 - His GTG [ENA] ¢þ
>WENV170369766 CETR01031889 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 733 806 + His GTG [ENA] ¢þ
>WENV170396794 CEUD01000501 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 154 227 + His GTG [ENA] ¢þ
>WENV170493254 CEVQ01347782 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 724 652 - His GTG [ENA] ¢þ
>WENV170503048 CEVV01046780 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1080 1008 - His GTG [ENA] ¢þ
>WENV170506123 CEVW01134694 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1049 1121 + His GTG [ENA] ¢þ
>WENV170507167 CEVX01023279 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 929 1001 + His GTG [ENA] ¢þ
>WENV170533591 CEWO01143953 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 413 341 - His GTG [ENA] ¢þ
>WENV170570483 FLOH01000006 [FLOH] marine metagenome; water 1185465 1185393 - His GTG [ENA] ¢þ
>WENV170616349 FUWD012885634 [FUWD] metagenome; unknown 2089 2161 + His GTG [ENA] ¢þ
>WENV170616350 FUWD012885635 [FUWD] metagenome; unknown 139 211 + His GTG [ENA] ¢þ
>WENV170616375 FUWD012886121 [FUWD] metagenome; unknown 354 282 - His GTG [ENA] ¢þ
>WENV170619874 FUWD013022420 [FUWD] metagenome; unknown 314 387 + His GTG [ENA] ¢þ
>WENV170624442 FUWD013181756 [FUWD] metagenome; unknown 3539 3467 - His GTG [ENA] ¢þ
>WENV170624459 FUWD013182005 [FUWD] metagenome; unknown 1678 1606 - His GTG [ENA] ¢þ
>WENV170627994 FUWD013240579 [FUWD] metagenome; unknown 314 387 + His GTG [ENA] ¢þ
>WENV170632730 FUWD013386652 [FUWD] metagenome; unknown 3539 3467 - His GTG [ENA] ¢þ
>WENV170632744 FUWD013386860 [FUWD] metagenome; unknown 1678 1606 - His GTG [ENA] ¢þ
>WENV170763474 LWDU01010681 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 2750 2823 + His GTG [ENA] ¢þ
>WENV170764087 LWDU01029869 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 2120 2047 - His GTG [ENA] ¢þ
>WENV170764114 LWDU01030563 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 213 286 + His GTG [ENA] ¢þ
>WENV170807982 MDSW01107396 [MDSW] marine metagenome; seawater 3 75 + His GTG [ENA] ¢þ
>WENV170866360 MDTB01131967 [MDTB] marine metagenome; seawater 109 181 + His GTG [ENA] ¢þ
>WENV170877236 MDTC01054157 [MDTC] marine metagenome; seawater 5387 5459 + His GTG [ENA] ¢þ
>WENV170880537 MDTC01115518 [MDTC] marine metagenome; seawater 1784 1857 + His GTG [ENA] ¢þ
>WENV11101345 AGBE01001910 Marine metagenome, Gulf of Maine surface waters 4102 4174 + His GTG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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