tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = GTT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281130 (66 seq.)
>A171003428 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 720401 720327 - Asn GTT - ¡û
>A171006018 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1039262 1039336 + Asn GTT - ¡û
>WENV001528 AACY020043443 Marine microbial communities from Global Ocean Sampling (GOS) 80 158 + Asn GTT [ENA]
>WENV180048799 MPLU02011829 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 709 783 + Asn GTT [ENA] ¢þ
>WENV180053994 MPLV02059628 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 407 481 + Asn GTT [ENA] ¢þ
>WENV180054369 MPLV02085650 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 2271 2197 - Asn GTT [ENA] ¢þ
>WENV180060938 MPLX02196740 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 580 506 - Asn GTT [ENA] ¢þ
>WENV180115463 OAPT01002953 [OAPT] marine metagenome; seawater 732 658 - Asn GTT [ENA] ¢þ
>WENV180590530 OCOT01054884 [OCOT] marine metagenome; ENVO:00002010 157 83 - Asn GTT [ENA] ¢þ
>WENV181307272 OFIP01010207 [OFIP] marine metagenome; seawater 79 153 + Asn GTT [ENA] ¢þ
>WENV181308779 OFIT01016208 [OFIT] marine metagenome; seawater 289 363 + Asn GTT [ENA] ¢þ
>WENV181309285 OFIV01001313 [OFIV] marine metagenome; seawater 437 511 + Asn GTT [ENA] ¢þ
>WENV181315683 OFJQ01001668 [OFJQ] marine metagenome; seawater 427 501 + Asn GTT [ENA] ¢þ
>WENV181315917 OFJR01003612 [OFJR] marine metagenome; seawater 308 382 + Asn GTT [ENA] ¢þ
>WENV181316474 OFJU01004604 [OFJU] marine metagenome; seawater 562 488 - Asn GTT [ENA] ¢þ
>WENV181318633 OFKA01003230 [OFKA] marine metagenome; seawater 133 207 + Asn GTT [ENA] ¢þ
>WENV181320250 OFKG01003945 [OFKG] marine metagenome; seawater 789 715 - Asn GTT [ENA] ¢þ
>WENV181371098 OFQU01025374 [OFQU] wastewater metagenome; Exp Tend CN 90WW 693 767 + Asn GTT [ENA] ¢þ
>WENV181379639 OFRD01004584 [OFRD] wastewater metagenome; Exp Tend CN 100WW 495 421 - Asn GTT [ENA] ¢þ
>WENV181385999 OFRL01000301 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 11380 11454 + Asn GTT [ENA] ¢þ
>WENV183793925 PVBE010053289 [PVBE] marine metagenome; water 3071 3145 + Asn GTT [ENA] ¢þ
>WENV183804820 PVBE010961535 [PVBE] marine metagenome; water 9669 9595 - Asn GTT [ENA] ¢þ
>WENV170112716 CENF01000870 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 790 864 + Asn GTT [ENA] ¢þ
>WENV170145281 CENY01304541 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 525 599 + Asn GTT [ENA] ¢þ
>WENV170145645 CENZ01001396 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 194 120 - Asn GTT [ENA] ¢þ
>WENV170155061 CEOF01418662 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7 81 + Asn GTT [ENA] ¢þ
>WENV170240430 CEQN01124256 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 421 347 - Asn GTT [ENA] ¢þ
>WENV170274657 CERM01032782 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 563 489 - Asn GTT [ENA] ¢þ
>WENV170286401 CERW01087568 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 3 - Asn GTT [ENA] ¢þ
>WENV170323406 CESR01336442 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2825 2751 - Asn GTT [ENA] ¢þ
>WENV170325158 CESS01201249 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 399 325 - Asn GTT [ENA] ¢þ
>WENV170378833 CETV01053536 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 330 404 + Asn GTT [ENA] ¢þ
>WENV170479098 CEVK01171541 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 455 529 + Asn GTT [ENA] ¢þ
>WENV170482794 CEVM01059806 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 215 141 - Asn GTT [ENA] ¢þ
>WENV170488396 CEVO01198377 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 629 555 - Asn GTT [ENA] ¢þ
>WENV170492286 CEVQ01131162 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 395 469 + Asn GTT [ENA] ¢þ
>WENV170500282 CEVU01001883 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 655 729 + Asn GTT [ENA] ¢þ
>WENV170505688 CEVW01090017 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3213 3287 + Asn GTT [ENA] ¢þ
>WENV170508314 CEVX01152031 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 110 36 - Asn GTT [ENA] ¢þ
>WENV170532366 CEWO01035906 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 187 113 - Asn GTT [ENA] ¢þ
>WENV170533141 CEWO01100079 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 224 150 - Asn GTT [ENA] ¢þ
>WENV170565129 FAOW01081030 [FAOW] marine metagenome; seawater 77 3 - Asn GTT [ENA] ¢þ
>WENV170599435 FUWD010074478 [FUWD] metagenome; unknown 323 249 - Asn GTT [ENA] ¢þ
>WENV170616408 FUWD012887009 [FUWD] metagenome; unknown 442 516 + Asn GTT [ENA] ¢þ
>WENV170616409 FUWD012887010 [FUWD] metagenome; unknown 114 188 + Asn GTT [ENA] ¢þ
>WENV170617156 FUWD012915828 [FUWD] metagenome; unknown 536 462 - Asn GTT [ENA] ¢þ
>WENV170617157 FUWD012915829 [FUWD] metagenome; unknown 318 244 - Asn GTT [ENA] ¢þ
>WENV170617781 FUWD012936800 [FUWD] metagenome; unknown 484 558 + Asn GTT [ENA] ¢þ
>WENV170617782 FUWD012936801 [FUWD] metagenome; unknown 349 423 + Asn GTT [ENA] ¢þ
>WENV170620105 FUWD013025961 [FUWD] metagenome; unknown 1336 1262 - Asn GTT [ENA] ¢þ
>WENV170628236 FUWD013243836 [FUWD] metagenome; unknown 1336 1262 - Asn GTT [ENA] ¢þ
>WENV170750148 LUMG01000504 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 4528 4602 + Asn GTT [ENA] ¢þ
>WENV170756695 LUMP01000548 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 6645 6719 + Asn GTT [ENA] ¢þ
>WENV170763911 LWDU01024402 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 16 90 + Asn GTT [ENA] ¢þ
>WENV170764115 LWDU01030578 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 650 576 - Asn GTT [ENA] ¢þ
>WENV170944774 MDUO01003487 [MDUO] marine metagenome; 30 m water sample from station 6 8 82 + Asn GTT [ENA] ¢þ
>WENV170947503 MEHZ010677891 [MEHZ] marine metagenome; marine surface water 223 149 - Asn GTT [ENA] ¢þ
>WENV11101314 AGBE01000953 Marine metagenome, Gulf of Maine surface waters 582 656 + Asn GTT [ENA] ¡û
>WENV11101378 AGBE01002115 Marine metagenome, Gulf of Maine surface waters 3436 3510 + Asn GTT [ENA] ¡û
>WENV050721 AACY022896624 Marine microbial communities from Global Ocean Sampling (GOS) 257 179 - Asn GTT [ENA]
>WENV050722 AACY022896738 Marine microbial communities from Global Ocean Sampling (GOS) 583 661 + Asn GTT [ENA]
>WENV056991 AACY023278580 Marine microbial communities from Global Ocean Sampling (GOS) 277 355 + Asn GTT [ENA]
>W1610005469 AJVJ01000056 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 22751 22825 + Asn GTT [ENA] ¡û
>W1610597507 LFEW01000028 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 36590 36664 + Asn GTT [ENA] ¡û
>W1610617260 LGTD01000751 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 1520 1446 - Asn GTT [ENA] ¡û
>W1610855528 LQMW01000023 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 10934 10860 - Asn GTT [ENA] ¡û
Identical group No.281144 (26 seq.)
>WENV180101570 OAOV01012989 [OAOV] marine metagenome; ENVO:00002010 443 369 - Asn GTT [ENA] ¢þ
>WENV181309365 OFIV01007810 [OFIV] marine metagenome; seawater 154 228 + Asn GTT [ENA] ¢þ
>WENV181320648 OFKI01004427 [OFKI] marine metagenome; seawater 426 500 + Asn GTT [ENA] ¢þ
>WENV181321644 OFKN01000175 [OFKN] marine metagenome; seawater 852 778 - Asn GTT [ENA] ¢þ
>WENV181392250 OFRW01016055 [OFRW] seawater metagenome; seawater 305 231 - Asn GTT [ENA] ¢þ
>WENV182560435 OJDU01001014 [OJDU] seawater metagenome; Sea water 4575 4649 + Asn GTT [ENA] ¢þ
>WENV183616294 OOED01000865 [OOED] marine metagenome; seawater 281 355 + Asn GTT [ENA] ¢þ
>WENV183621832 OOFV01000034 [OOFV] marine metagenome; seawater 1795 1721 - Asn GTT [ENA] ¢þ
>WENV183626688 OOGJ01010698 [OOGJ] marine metagenome; seawater 365 439 + Asn GTT [ENA] ¢þ
>WENV183626970 OOGK01016744 [OOGK] marine metagenome; seawater 305 231 - Asn GTT [ENA] ¢þ
>WENV183630365 OOGS01006615 [OOGS] marine metagenome; seawater 391 317 - Asn GTT [ENA] ¢þ
>WENV183688847 ORMF011353718 [ORMF] groundwater metagenome; groundwater 29 103 + Asn GTT [ENA] ¢þ
>WENV170557365 CXWL01025392 [CXWL] groundwater metagenome; biofilm material 1026 952 - Asn GTT [ENA] ¢þ
>WENV170566767 FLLY01002047 [FLLY] seawater metagenome; seawater 959 885 - Asn GTT [ENA] ¢þ
>WENV170568314 FLMP01029549 [FLMP] seawater metagenome; seawater 957 883 - Asn GTT [ENA] ¢þ
>WENV170570475 FLOH01000006 [FLOH] marine metagenome; water 796721 796795 + Asn GTT [ENA] ¢þ
>WENV170571932 FLOH01000393 [FLOH] marine metagenome; water 78885 78959 + Asn GTT [ENA] ¢þ
>WENV170620182 FUWD013026949 [FUWD] metagenome; unknown 744 670 - Asn GTT [ENA] ¢þ
>WENV170625044 FUWD013190633 [FUWD] metagenome; unknown 4156 4082 - Asn GTT [ENA] ¢þ
>WENV170627936 FUWD013239840 [FUWD] metagenome; unknown 4749 4823 + Asn GTT [ENA] ¢þ
>WENV170633300 FUWD013394050 [FUWD] metagenome; unknown 4156 4082 - Asn GTT [ENA] ¢þ
>WENV170763676 LWDU01016298 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 103 29 - Asn GTT [ENA] ¢þ
>WENV170953352 MEHZ011641110 [MEHZ] marine metagenome; marine surface water 1375 1449 + Asn GTT [ENA] ¢þ
>WENV029397 AACY021195457 Marine microbial communities from Global Ocean Sampling (GOS) 318 396 + Asn GTT [ENA]
>WENV11101396 AGBE01002176 Marine metagenome, Gulf of Maine surface waters 7240 7166 - Asn GTT [ENA] ¡û
>W1610625320 LIAL01000008 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 18434 18508 + Asn GTT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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