tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = TAG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.86983 (67 seq.)
>A171007058 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1184570 1184657 + Leu TAG - ¡û
>WENV001163 AACY020035499 Marine microbial communities from Global Ocean Sampling (GOS) 589 678 + Leu TAG [ENA]
>WENV001176 AACY020035739 Marine microbial communities from Global Ocean Sampling (GOS) 2159 2070 - Leu TAG [ENA]
>WENV180050759 MPLU02166607 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 771 858 + Leu TAG [ENA] ¢þ
>WENV180053805 MPLV02044766 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 362 449 + Leu TAG [ENA] ¢þ
>WENV180063836 MPLX02378534 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 142 55 - Leu TAG [ENA] ¢þ
>WENV180115987 OAPT01088110 [OAPT] marine metagenome; seawater 356 269 - Leu TAG [ENA] ¢þ
>WENV180367548 OBOE01142472 [OBOE] marine metagenome; ENVO:00002010 161 74 - Leu TAG [ENA] ¢þ
>WENV181092379 OEBK01000027 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 2101 2188 + Leu TAG [ENA] ¢þ
>WENV181306901 OFIO01000354 [OFIO] marine metagenome; seawater 2243 2330 + Leu TAG [ENA] ¢þ
>WENV181307215 OFIP01005327 [OFIP] marine metagenome; seawater 520 607 + Leu TAG [ENA] ¢þ
>WENV181308627 OFIT01003029 [OFIT] marine metagenome; seawater 97 10 - Leu TAG [ENA] ¢þ
>WENV181309298 OFIV01002249 [OFIV] marine metagenome; seawater 515 602 + Leu TAG [ENA] ¢þ
>WENV181315651 OFJQ01000404 [OFJQ] marine metagenome; seawater 291 204 - Leu TAG [ENA] ¢þ
>WENV181316019 OFJR01013145 [OFJR] marine metagenome; seawater 292 379 + Leu TAG [ENA] ¢þ
>WENV181316421 OFJU01000855 [OFJU] marine metagenome; seawater 376 289 - Leu TAG [ENA] ¢þ
>WENV181318584 OFKA01001023 [OFKA] marine metagenome; seawater 1285 1372 + Leu TAG [ENA] ¢þ
>WENV181320215 OFKG01002109 [OFKG] marine metagenome; seawater 905 992 + Leu TAG [ENA] ¢þ
>WENV181320855 OFKI01036918 [OFKI] marine metagenome; seawater 261 174 - Leu TAG [ENA] ¢þ
>WENV181321786 OFKN01008237 [OFKN] marine metagenome; seawater 375 288 - Leu TAG [ENA] ¢þ
>WENV181392444 OFRW01050540 [OFRW] seawater metagenome; seawater 263 176 - Leu TAG [ENA] ¢þ
>WENV182560603 OJDU01009720 [OJDU] seawater metagenome; Sea water 229 142 - Leu TAG [ENA] ¢þ
>WENV183616331 OOED01003282 [OOED] marine metagenome; seawater 233 146 - Leu TAG [ENA] ¢þ
>WENV183621861 OOFV01000177 [OOFV] marine metagenome; seawater 5267 5354 + Leu TAG [ENA] ¢þ
>WENV183626592 OOGJ01000764 [OOGJ] marine metagenome; seawater 290 203 - Leu TAG [ENA] ¢þ
>WENV183627177 OOGK01052729 [OOGK] marine metagenome; seawater 263 176 - Leu TAG [ENA] ¢þ
>WENV183630287 OOGS01001315 [OOGS] marine metagenome; seawater 1189 1276 + Leu TAG [ENA] ¢þ
>WENV170114300 CENF01170370 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2336 2423 + Leu TAG [ENA] ¢þ
>WENV170146495 CENZ01058812 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 489 576 + Leu TAG [ENA] ¢þ
>WENV170154690 CEOF01213658 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3082 2995 - Leu TAG [ENA] ¢þ
>WENV170168337 CEOP01079347 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 758 671 - Leu TAG [ENA] ¢þ
>WENV170231542 CEQH01212436 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6 93 + Leu TAG [ENA] ¢þ
>WENV170243767 CEQO01211288 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 113 200 + Leu TAG [ENA] ¢þ
>WENV170271828 CERK01011327 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1340 1253 - Leu TAG [ENA] ¢þ
>WENV170285698 CERW01012704 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 422 509 + Leu TAG [ENA] ¢þ
>WENV170294047 CESC01032303 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 89 2 - Leu TAG [ENA] ¢þ
>WENV170321913 CESR01091144 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2663 2750 + Leu TAG [ENA] ¢þ
>WENV170324690 CESS01097002 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 348 261 - Leu TAG [ENA] ¢þ
>WENV170475668 CEVI01022485 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3780 3693 - Leu TAG [ENA] ¢þ
>WENV170488215 CEVO01127998 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 236 - Leu TAG [ENA] ¢þ
>WENV170500992 CEVU01065225 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 640 553 - Leu TAG [ENA] ¢þ
>WENV170502651 CEVV01012870 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 789 876 + Leu TAG [ENA] ¢þ
>WENV170507828 CEVX01096528 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2811 2898 + Leu TAG [ENA] ¢þ
>WENV170569428 FLMP01203384 [FLMP] seawater metagenome; seawater 311 398 + Leu TAG [ENA] ¢þ
>WENV170572361 FLOH01000772 [FLOH] marine metagenome; water 8831 8744 - Leu TAG [ENA] ¢þ
>WENV170598820 FUWD010050352 [FUWD] metagenome; unknown 284 197 - Leu TAG [ENA] ¢þ
>WENV170616767 FUWD012902249 [FUWD] metagenome; unknown 1666 1753 + Leu TAG [ENA] ¢þ
>WENV170616768 FUWD012902250 [FUWD] metagenome; unknown 93 180 + Leu TAG [ENA] ¢þ
>WENV170616769 FUWD012902251 [FUWD] metagenome; unknown 8 95 + Leu TAG [ENA] ¢þ
>WENV170616957 FUWD012910343 [FUWD] metagenome; unknown 886 973 + Leu TAG [ENA] ¢þ
>WENV170616958 FUWD012910344 [FUWD] metagenome; unknown 8 95 + Leu TAG [ENA] ¢þ
>WENV170616962 FUWD012910675 [FUWD] metagenome; unknown 873 786 - Leu TAG [ENA] ¢þ
>WENV170616963 FUWD012910676 [FUWD] metagenome; unknown 120 33 - Leu TAG [ENA] ¢þ
>WENV170616967 FUWD012910907 [FUWD] metagenome; unknown 416 329 - Leu TAG [ENA] ¢þ
>WENV170619957 FUWD013023578 [FUWD] metagenome; unknown 614 527 - Leu TAG [ENA] ¢þ
>WENV170628088 FUWD013241635 [FUWD] metagenome; unknown 614 527 - Leu TAG [ENA] ¢þ
>WENV170701571 LKGT01010953 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 856 943 + Leu TAG [ENA] ¢þ
>WENV170953424 MEHZ011644583 [MEHZ] marine metagenome; marine surface water 421 334 - Leu TAG [ENA] ¢þ
>WENV170953508 MEHZ011649592 [MEHZ] marine metagenome; marine surface water 46 133 + Leu TAG [ENA] ¢þ
>ENV09004281 ADKQ01001567 Marine metagenome apWin_C1 1030 1117 + Leu TAG [ENA] ¡û
>WENV11101339 AGBE01001874 Marine metagenome, Gulf of Maine surface waters 331 244 - Leu TAG [ENA] ¡û
>WENV11101360 AGBE01002026 Marine metagenome, Gulf of Maine surface waters 4247 4334 + Leu TAG [ENA] ¡û
>WENV11101368 AGBE01002039 Marine metagenome, Gulf of Maine surface waters 7983 8070 + Leu TAG [ENA] ¡û
>W1610029908 AXWL01000017 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 821 734 - Leu TAG [ENA] ¡û
>W1610599339 LFLC01000025 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 165064 165151 + Leu TAG [ENA] ¡û
>W1610625305 LIAK01000123 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-120910-bin56 [LIAK] 1061 1148 + Leu TAG [ENA] ¡û
>W1610625318 LIAL01000006 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 21015 20928 - Leu TAG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK