tRNA genes clustered and arranged according to each identical group

Marine metagenome apWin_C1

Anticodon = ACG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.282413 (82 seq.)
>W1711631553 MPRJ01000114 Gammaproteobacteria Solemya velesiana gill symbiont gill symbiont [MPRJ] 2620 2696 + Arg ACG [ENA] ¡û
>W131179623 ARMN01000026 Gammaproteobacteria Amphritea japonica ATCC BAA-1530 [ARMN] 7728 7652 - Arg ACG [ENA] ¡û
>W131179624 ARMN01000026 Gammaproteobacteria Amphritea japonica ATCC BAA-1530 [ARMN] 7608 7532 - Arg ACG [ENA] ¡û
>W131231212 AUIH01000006 Gammaproteobacteria Saccharospirillum impatiens DSM 12546 [AUIH] 98048 97972 - Arg ACG [ENA] ¡û
>W131231213 AUIH01000006 Gammaproteobacteria Saccharospirillum impatiens DSM 12546 [AUIH] 97838 97762 - Arg ACG [ENA] ¡û
>w014076 AAOE01000005 Gammaproteobacteria Reinekea blandensis MED297 [AAOE] 150125 150203 + Arg ACG [ENA] ¡û
>w014075 AAOE01000005 Gammaproteobacteria Reinekea blandensis MED297 [AAOE] 150002 150078 + Arg ACG [ENA] ¡û
>w013939 AAOA01000009 Gammaproteobacteria Congregibacter litoralis KT 71 [AAOA] 123243 123321 + Arg ACG [ENA] ¡û
>WENV180209105 OBAK01017107 [OBAK] marine metagenome; ENVO.00002150 282 206 - Arg ACG [ENA] ¢þ
>WENV180209444 OBAL01000903 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 3925 4001 + Arg ACG [ENA] ¢þ
>WENV180293960 OBIY01006504 [OBIY] beach sand metagenome; beach sand 1757 1833 + Arg ACG [ENA] ¢þ
>WENV180351977 OBLQ010139111 [OBLQ] soil metagenome; soil 831 755 - Arg ACG [ENA] ¢þ
>WENV180359192 OBNR01014181 [OBNR] marine metagenome; Seawater_00002010_00002149 466 542 + Arg ACG [ENA] ¢þ
>WENV180367835 OBOF01005797 [OBOF] marine metagenome; ENVO:00002010 738 814 + Arg ACG [ENA] ¢þ
>WENV180369654 OBOG01222600 [OBOG] marine metagenome; seawater 215 139 - Arg ACG [ENA] ¢þ
>WENV180591779 OCOV01099272 [OCOV] marine metagenome; ENVO:01000301 149 225 + Arg ACG [ENA] ¢þ
>WENV180637098 OCRG01000133 [OCRG] marine metagenome; seawater 5420 5344 - Arg ACG [ENA] ¢þ
>WENV018844 AACY020519950 Marine microbial communities from Global Ocean Sampling (GOS) 539 463 - Arg ACG [ENA]
>WENV018845 AACY020519950 Marine microbial communities from Global Ocean Sampling (GOS) 639 563 - Arg ACG [ENA]
>WENV018846 AACY020519950 Marine microbial communities from Global Ocean Sampling (GOS) 767 691 - Arg ACG [ENA]
>WENV182550914 OJCB01001683 [OJCB] seawater metagenome; Sea water 5449 5373 - Arg ACG [ENA] ¢þ
>WENV183513187 OMKS01003223 [OMKS] sediment metagenome; hot spring sediment 105 181 + Arg ACG [ENA] ¢þ
>WENV183718932 PDWJ01007846 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 3127 3203 + Arg ACG [ENA] ¢þ
>WENV170014803 AZIB01001391 [AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in 285 209 - Arg ACG [ENA] ¢þ
>WENV170136277 CENV01019246 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 120 196 + Arg ACG [ENA] ¢þ
>WENV170155270 CEOG01008145 [CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 634 710 + Arg ACG [ENA] ¢þ
>WENV170155271 CEOG01008145 [CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 786 862 + Arg ACG [ENA] ¢þ
>WENV170260230 CEQZ01002526 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 12131 12055 - Arg ACG [ENA] ¢þ
>WENV170260231 CEQZ01002526 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11979 11903 - Arg ACG [ENA] ¢þ
>WENV170265828 CERE01016754 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201123 201199 + Arg ACG [ENA] ¢þ
>WENV170265829 CERE01016754 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201275 201351 + Arg ACG [ENA] ¢þ
>WENV170276533 CERN01056524 [CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5759 5835 + Arg ACG [ENA] ¢þ
>WENV170312326 CESM01234124 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5435 5511 + Arg ACG [ENA] ¢þ
>WENV170412207 CEUK01015357 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 29660 29736 + Arg ACG [ENA] ¢þ
>WENV170418239 CEUM01029164 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 29663 29739 + Arg ACG [ENA] ¢þ
>WENV170440111 CEUV01070548 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 25912 25988 + Arg ACG [ENA] ¢þ
>WENV170454408 CEVA01037859 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5582 5506 - Arg ACG [ENA] ¢þ
>WENV170465790 CEVE01000994 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1312 1388 + Arg ACG [ENA] ¢þ
>WENV170468658 CEVF01050838 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 94516 94440 - Arg ACG [ENA] ¢þ
>WENV170480746 CEVL01134455 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 221 297 + Arg ACG [ENA] ¢þ
>WENV170519716 CEWE01254470 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3582 3506 - Arg ACG [ENA] ¢þ
>WENV170810228 MDSW01145263 [MDSW] marine metagenome; seawater 266018 266094 + Arg ACG [ENA] ¢þ
>WENV170882742 MDTC01153308 [MDTC] marine metagenome; seawater 16426 16502 + Arg ACG [ENA] ¢þ
>WENV170889796 MDTD01000912 [MDTD] marine metagenome; seawater 175 99 - Arg ACG [ENA] ¢þ
>WENV170894596 MDTD01068019 [MDTD] marine metagenome; seawater 88901 88825 - Arg ACG [ENA] ¢þ
>WENV170922745 MDTG01036767 [MDTG] marine metagenome; seawater 3015 3091 + Arg ACG [ENA] ¢þ
>WENV170923641 MDTG01052605 [MDTG] marine metagenome; seawater 22773 22849 + Arg ACG [ENA] ¢þ
>WENV170962365 MRWF01013442 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 12722 12798 + Arg ACG [ENA] ¢þ
>WENV170963338 MRWG01000111 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 235591 235667 + Arg ACG [ENA] ¢þ
>C181071007 CP022684 Gammaproteobacteria Ketobacter alkanivorans GI5 [CP022684] 1016080 1016004 - Arg ACG - ¡û
>C181200150 CP031415 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [CP031415] 1220068 1220144 + Arg ACG - ¡û
>C181200151 CP031415 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [CP031415] 1220220 1220296 + Arg ACG - ¡û
>W09112296 ABXT01000004 Gammaproteobacteria Methylophaga thiooxydans DMS010 [ABXT] 44878 44802 - Arg ACG [ENA] ¡û
>W09118457 ACCX01000017 Gammaproteobacteria gamma proteobacterium NOR5-3 [ACCX] 170276 170200 - Arg ACG [ENA] ¡û
>W1910744985 MIES01000033 Gammaproteobacteria Saccharospirillum sp. MSK14-1 [MIES] 1621413 1621337 - Arg ACG [ENA] ¡û
>W1910744986 MIES01000033 Gammaproteobacteria Saccharospirillum sp. MSK14-1 [MIES] 1621259 1621183 - Arg ACG [ENA] ¡û
>W1911708836 QPEP01000009 Gammaproteobacteria Salinibius halmophilus WDS2A16A [QPEP] 51283 51359 + Arg ACG [ENA] ¡û
>W1911708837 QPEP01000009 Gammaproteobacteria Salinibius halmophilus WDS2A16A [QPEP] 51415 51491 + Arg ACG [ENA] ¡û
>W1911708838 QPEP01000009 Gammaproteobacteria Salinibius halmophilus WDS2A16A [QPEP] 51558 51634 + Arg ACG [ENA] ¡û
>W1911748745 QWEZ01000001 Gammaproteobacteria Aestuariirhabdus litorea GTF13 [QWEZ] 1803394 1803318 - Arg ACG [ENA] ¡û
>W1911748746 QWEZ01000001 Gammaproteobacteria Aestuariirhabdus litorea GTF13 [QWEZ] 1803294 1803218 - Arg ACG [ENA] ¡û
>W1911748747 QWEZ01000001 Gammaproteobacteria Aestuariirhabdus litorea GTF13 [QWEZ] 1801968 1801892 - Arg ACG [ENA] ¡û
>W1911748748 QWEZ01000001 Gammaproteobacteria Aestuariirhabdus litorea GTF13 [QWEZ] 1798393 1798317 - Arg ACG [ENA] ¡û
>W1810252386 PQGG01000040 Gammaproteobacteria Marortus luteolus ZX-21 [PQGG] 98045 97969 - Arg ACG [ENA] ¡û
>W1810477904 QAPE01000012 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [QAPE] 11243 11167 - Arg ACG [ENA] ¡û
>W1810477905 QAPE01000012 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [QAPE] 11091 11015 - Arg ACG [ENA] ¡û
>W1810760201 QPJY01000017 Gammaproteobacteria Thioalbus denitrificans DSM 26407 [QPJY] 19187 19263 + Arg ACG [ENA] ¡û
>C151001088 AP012978 Gammaproteobacteria endosymbiont of unidentified scaly snail isolate Monju [AP012978] 1091345 1091421 + Arg ACG [Ensembl] ¡û
>C151017310 CP007142 Gammaproteobacteria Gynuella sunshinyii YC6258 [CP007142] 2583582 2583658 + Arg ACG [Ensembl] ¡û
>C151017311 CP007142 Gammaproteobacteria Gynuella sunshinyii YC6258 [CP007142] 2583690 2583766 + Arg ACG [Ensembl] ¡û
>ENV09004318 ADKQ01005633 Marine metagenome apWin_C1 10 86 + Arg ACG [ENA] ¡û
>W1511354251 JRQD01000003 Gammaproteobacteria Methylophaga thiooxydans [JRQD] 173421 173497 + Arg ACG [ENA] ¡û
>W11163830 AFIG01000001 Gammaproteobacteria Methylophaga aminisulfidivorans MP [AFIG] 1581890 1581966 + Arg ACG [ENA] ¡û
>W11163831 AFIG01000001 Gammaproteobacteria Methylophaga aminisulfidivorans MP [AFIG] 1582043 1582119 + Arg ACG [ENA] ¡û
>C161050918 CP013099 Gammaproteobacteria Candidatus Tenderia electrophaga [CP013099] 2813028 2812952 - Arg ACG - ¡û
>WENV069029 AACY023749076 Marine microbial communities from Global Ocean Sampling (GOS) 648 572 - Arg ACG [ENA]
>WENV069030 AACY023749076 Marine microbial communities from Global Ocean Sampling (GOS) 798 722 - Arg ACG [ENA]
>W1710539732 FNVQ01000002 Gammaproteobacteria Marinobacterium lutimaris [FNVQ] 714743 714667 - Arg ACG [ENA] ¡û
>W1710551440 FOGB01000012 Gammaproteobacteria Amphritea atlantica [FOGB] 11360 11284 - Arg ACG [ENA] ¡û
>W1710551441 FOGB01000012 Gammaproteobacteria Amphritea atlantica [FOGB] 11233 11157 - Arg ACG [ENA] ¡û
>W1710551442 FOGB01000012 Gammaproteobacteria Amphritea atlantica [FOGB] 11145 11069 - Arg ACG [ENA] ¡û
>W1710566875 FOSH01000003 Gammaproteobacteria Methylophaga sulfidovorans [FOSH] 207339 207263 - Arg ACG [ENA] ¡û
Identical group No.288023 (31 seq.)
>WENV180275343 OBHT01010059 [OBHT] metagenome; hydrothermal vent 141 65 - Arg ACG [ENA] ¢þ
>WENV180276997 OBHV01025515 [OBHV] metagenome; water 77 1 - Arg ACG [ENA] ¢þ
>WENV180287808 OBIL01004998 [OBIL] metagenome; hydrothermal vent 779 855 + Arg ACG [ENA] ¢þ
>WENV180299274 OBJC01000191 [OBJC] metagenome; water 8860 8936 + Arg ACG [ENA] ¢þ
>WENV180580981 OCMH01007914 [OCMH] metagenome; diffuse fluid 185 109 - Arg ACG [ENA] ¢þ
>WENV180647918 OCSI01025828 [OCSI] metagenome; diffuse fluid 334 410 + Arg ACG [ENA] ¢þ
>WENV181209139 OFBD01008034 [OFBD] metagenome; hydrothermal vent 498 574 + Arg ACG [ENA] ¢þ
>WENV181209342 OFBE01000593 [OFBE] metagenome; hydrothermal vent 427 351 - Arg ACG [ENA] ¢þ
>WENV181209858 OFBF01005099 [OFBF] metagenome; hydrothermal vent 144 68 - Arg ACG [ENA] ¢þ
>WENV181209965 OFBG01000186 [OFBG] metagenome; hydrothermal vent 5906 5982 + Arg ACG [ENA] ¢þ
>WENV181210364 OFBH01000983 [OFBH] metagenome; hydrothermal vent 427 351 - Arg ACG [ENA] ¢þ
>WENV181211128 OFBJ01010248 [OFBJ] metagenome; hydrothermal vent 630 706 + Arg ACG [ENA] ¢þ
>WENV181211246 OFBK01000256 [OFBK] metagenome; hydrothermal vent 5123 5199 + Arg ACG [ENA] ¢þ
>WENV181211709 OFBL01002671 [OFBL] metagenome; hydrothermal vent 249 173 - Arg ACG [ENA] ¢þ
>WENV181211850 OFBM01000324 [OFBM] metagenome; hydrothermal vent 427 351 - Arg ACG [ENA] ¢þ
>WENV181213616 OFBV01013846 [OFBV] metagenome; hydrothermal vent 338 414 + Arg ACG [ENA] ¢þ
>WENV181214022 OFBW01006822 [OFBW] metagenome; hydrothermal vent 127 51 - Arg ACG [ENA] ¢þ
>WENV181214813 OFBY01018988 [OFBY] metagenome; hydrothermal vent 148 72 - Arg ACG [ENA] ¢þ
>WENV181216348 OFCB01024441 [OFCB] metagenome; hydrothermal vent 485 561 + Arg ACG [ENA] ¢þ
>WENV181224947 OFDH01000209 [OFDH] metagenome; hydrothermal vent 427 351 - Arg ACG [ENA] ¢þ
>WENV181226554 OFDL01007940 [OFDL] metagenome; hydrothermal vent 498 574 + Arg ACG [ENA] ¢þ
>WENV181228117 OFDO01000391 [OFDO] metagenome; hydrothermal vent 4315 4391 + Arg ACG [ENA] ¢þ
>WENV170571831 FLOH01000333 [FLOH] marine metagenome; water 46728 46804 + Arg ACG [ENA] ¢þ
>WENV170575850 FPHR01000024 [FPHR] hydrothermal vent metagenome genome assembly, contig: NODE_54.; water 33084 33008 - Arg ACG [ENA] ¢þ
>WENV170615634 FUWD012863049 [FUWD] metagenome; unknown 20792 20716 - Arg ACG [ENA] ¢þ
>WENV170663969 JYMV01011233 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 2010 1934 - Arg ACG [ENA] ¢þ
>WENV170665029 JYMV01021996 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 2159 2083 - Arg ACG [ENA] ¢þ
>WENV170666125 JYMV01033657 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 3082 3158 + Arg ACG [ENA] ¢þ
>WENV170766770 LWDU01042675 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 8349 8425 + Arg ACG [ENA] ¢þ
>C151071170 CP010552 Gammaproteobacteria Candidatus Thioglobus autotrophicus EF1 [CP010552] 966629 966553 - Arg ACG - ¡û
>ENV09004373 ADKQ01010168 Marine metagenome apWin_C1 381 305 - Arg ACG [ENA] ¡û
Identical group No.295858 (21 seq.)
>W1711125160 LUMY01000102 Actinomycetota Acidimicrobiia bacterium REDSEA-S14_B4 [LUMY] 6205 6281 + Arg ACG [ENA] ¡û
>W1711979794 NDGV01001158 Cyanobacteriota cyanobacterium TDX16 [NDGV] 790 716 - Arg ACG [ENA] ¡û
>WENV180051235 MPLU02199014 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 90 14 - Arg ACG [ENA] ¢þ
>WENV181165073 OEIR01561733 [OEIR] soil metagenome; soil 62 136 + Arg ACG [ENA] ¢þ
>WENV181295237 OFHI01006469 [OFHI] soil metagenome; Clay 693 767 + Arg ACG [ENA] ¢þ
>WENV181305305 OFIG01001010 [OFIG] marine metagenome; seawater 1174 1250 + Arg ACG [ENA] ¢þ
>WENV181315690 OFJQ01002063 [OFJQ] marine metagenome; seawater 189 113 - Arg ACG [ENA] ¢þ
>WENV181316404 OFJU01000685 [OFJU] marine metagenome; seawater 207 131 - Arg ACG [ENA] ¢þ
>WENV170426643 CEUQ01101426 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 318 394 + Arg ACG [ENA] ¢þ
>WENV170490519 CEVQ01003155 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 198 122 - Arg ACG [ENA] ¢þ
>WENV170572432 FLOH01000856 [FLOH] marine metagenome; water 45428 45502 + Arg ACG [ENA] ¢þ
>WENV170600964 FUWD010150049 [FUWD] metagenome; unknown 442 366 - Arg ACG [ENA] ¢þ
>WENV170748674 LUME01000619 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 6205 6281 + Arg ACG [ENA] ¢þ
>WENV170761727 LUMV01013772 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 697 621 - Arg ACG [ENA] ¢þ
>WENV170913305 MDTE01132475 [MDTE] marine metagenome; seawater 4745 4669 - Arg ACG [ENA] ¢þ
>WENV170994369 MWWD01088103 [MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil 18 92 + Arg ACG [ENA] ¢þ
>WENV170994370 MWWD01088103 [MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil 287 361 + Arg ACG [ENA] ¢þ
>ENV09003505 ADGO01071416 Compost metagenome contig00001 305 229 - Arg ACG [ENA] ¡û
>ENV09004377 ADKQ01010428 Marine metagenome apWin_C1 153 77 - Arg ACG [ENA] ¡û
>WENV053432 AACY023096167 Marine microbial communities from Global Ocean Sampling (GOS) 342 264 - Arg ACG [ENA]
>W1610936093 LUMY01000102 Actinomycetota Acidimicrobiia bacterium REDSEA-S14_B4 [LUMY] 6205 6281 + Arg ACG [ENA] ¡û
Identical group No.528419 (1 seq.)
>ENV09004375 ADKQ01010222 Marine metagenome apWin_C1 530 455 - Arg ACG [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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