tRNA genes clustered and arranged according to each identical group

Marine metagenome apWin_C1

Anticodon = GGT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.453123 (6 seq.)
>WENV170230814 CEQH01081161 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 147 222 + Thr GGT [ENA] ¢þ
>WENV170278904 CERQ01176237 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 441 366 - Thr GGT [ENA] ¢þ
>WENV170321407 CESR01051235 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 400 475 + Thr GGT [ENA] ¢þ
>WENV170398072 CEUD01119592 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 639 564 - Thr GGT [ENA] ¢þ
>SRA1009830 SRR020491.370221 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 74 149 + Thr GGT [SRA]
>ENV09004321 ADKQ01005792 Marine metagenome apWin_C1 61 136 + Thr GGT [ENA] ¡û
Identical group No.528411 (17 seq.)
>WENV180093805 MPMF02346868 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 3483 3408 - Thr GGT [ENA] ¢þ
>WENV181309276 OFIV01000838 [OFIV] marine metagenome; seawater 1185 1110 - Thr GGT [ENA] ¢þ
>WENV181321684 OFKN01000731 [OFKN] marine metagenome; seawater 1986 2061 + Thr GGT [ENA] ¢þ
>WENV182548095 OJBV01000213 [OJBV] seawater metagenome; Sea water 147 72 - Thr GGT [ENA] ¢þ
>WENV182551449 OJCC01010142 [OJCC] seawater metagenome; Sea water 345 420 + Thr GGT [ENA] ¢þ
>WENV182565601 OJEH01017066 [OJEH] seawater metagenome; Sea water 1288 1363 + Thr GGT [ENA] ¢þ
>WENV182578254 OJGM01021727 [OJGM] seawater metagenome; Sea water 299 374 + Thr GGT [ENA] ¢þ
>WENV182587189 OJHL01011845 [OJHL] seawater metagenome; Sea water 147 72 - Thr GGT [ENA] ¢þ
>WENV182590045 OJIH01000049 [OJIH] seawater metagenome; Sea water 10966 11041 + Thr GGT [ENA] ¢þ
>WENV182592089 OJIQ01000058 [OJIQ] seawater metagenome; Sea water 12590 12665 + Thr GGT [ENA] ¢þ
>WENV183054308 OLGT01000329 [OLGT] seawater metagenome; Sea water 2050 1975 - Thr GGT [ENA] ¢þ
>WENV170280205 CERR01105894 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 137 62 - Thr GGT [ENA] ¢þ
>WENV170599634 FUWD010083573 [FUWD] metagenome; unknown 161 236 + Thr GGT [ENA] ¢þ
>WENV170766701 LWDU01042454 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 31337 31412 + Thr GGT [ENA] ¢þ
>WENV170946420 MDUR01013904 [MDUR] marine metagenome; 125 m water sample from station 6 304 229 - Thr GGT [ENA] ¢þ
>WENV170953314 MEHZ011639647 [MEHZ] marine metagenome; marine surface water 188 113 - Thr GGT [ENA] ¢þ
>ENV09004269 ADKQ01000431 Marine metagenome apWin_C1 799 874 + Thr GGT [ENA] ¡û
Identical group No.528414 (1 seq.)
>ENV09004309 ADKQ01004776 Marine metagenome apWin_C1 596 671 + Thr GGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK