tRNA genes clustered and arranged according to each identical group

Metagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)

Anticodon = CAT

HIT: 2 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.273386 (82 seq.)
>W1710822435	LKUW01000052	Betaproteobacteria	Paracidovorax citrulli [LKUW]	204630	204554	-	Met	CAT	[ENA]	○
>W1710870492	LMKO01000001	Betaproteobacteria	Xylophilus sp. Leaf220 [LMKO]	948476	948552	+	Met	CAT	[ENA]	○
>W1710873406	LMMT01000012	Betaproteobacteria	Pseudorhodoferax sp. Leaf265 [LMMT]	502987	503063	+	Met	CAT	[ENA]	○
>W1710873520	LMMV01000022	Betaproteobacteria	Pseudorhodoferax sp. Leaf267 [LMMV]	223894	223818	-	Met	CAT	[ENA]	○
>W1710873725	LMNA01000002	Betaproteobacteria	Pseudorhodoferax sp. Leaf274 [LMNA]	184766	184842	+	Met	CAT	[ENA]	○
>W1711172962	LWCN01000004	Betaproteobacteria	Delftia sp. GW456-R20 [LWCN]	2507518	2507594	+	Met	CAT	[ENA]	○
>W1711409750	MGPC01000035	Betaproteobacteria	Curvibacter sp. GWA2_64_110 [MGPC]	11438	11514	+	Met	CAT	[ENA]	○
>W1711575544	MNIU01000001	Betaproteobacteria	Delftia sp. 13_1_20CM_4_67_18 [MNIU]	42029	42105	+	Met	CAT	[ENA]	○
>W1711680548	MRWK01000787	Betaproteobacteria	Comamonadaceae bacterium BIN2 [MRWK]	1174	1250	+	Met	CAT	[ENA]	○
>W1711751413	MUNS01000041	Betaproteobacteria	Polaromonas sp. C04 [MUNS]	438155	438079	-	Met	CAT	[ENA]	○
>W1711853551	MYFL01000003	Betaproteobacteria	Delftia sp. K82 [MYFL]	1022782	1022706	-	Met	CAT	[ENA]	○
>W131045656	AMRP01000294	Betaproteobacteria	Paracidovorax citrulli ZJU1106 [AMRP]	1333	1257	-	Met	CAT	[ENA]	○
>W131171409	ARGE01000035	Betaproteobacteria	Brachymonas chironomi DSM 19884 [ARGE]	75122	75046	-	Met	CAT	[ENA]	○
>W131178419	ARLO01000067	Betaproteobacteria	Curvibacter lanceolatus ATCC 14669 [ARLO]	115158	115234	+	Met	CAT	[ENA]	○
>W131226948	AUET01000011	Betaproteobacteria	Comamonadaceae bacterium URHA0028 [AUET]	376389	376465	+	Met	CAT	[ENA]	○
>W131229596	AUGX01000023	Betaproteobacteria	Ottowia thiooxydans DSM 14619 [AUGX]	45270	45194	-	Met	CAT	[ENA]	○
>C000098	CP000512	Betaproteobacteria	Paracidovorax citrulli AAC00-1 [CP000512]	953378	953454	+	Met	CAT	[Ensembl]	○
>C018627	CP000267	Betaproteobacteria	Rhodoferax ferrireducens T118 DSM 15236 [CP000267]	1702020	1701944	-	Met	CAT	[Ensembl]	○
>w020802	AAVD01000002	Betaproteobacteria	Delftia acidovorans SPH-1 [AAVD]	405437	405513	+	Met	CAT	[ENA]	○
>C171072944	CP018101	Betaproteobacteria	Delftia sp. HK171 [CP018101]	1720896	1720820	-	Met	CAT	-	○
>C171089941	CP019171	Betaproteobacteria	Delftia acidovorans [CP019171]	1753427	1753351	-	Met	CAT	-	○
>C171091643	CP019236	Betaproteobacteria	Rhodoferax koreense DCY-110 [CP019236]	4704383	4704459	+	Met	CAT	-	○
>WENV180019583	FTCD01000211	[FTCD] metagenome; soil		3364	3288	-	Met	CAT	[ENA]	◯
>w008227	AAJK01000019	Betaproteobacteria	Rhodoferax ferrireducens DSM 15236 [AAJK]	13440	13516	+	Met	CAT	[ENA]	○
>WENV180267131	OBEQ011819097	[OBEQ] groundwater metagenome; groundwater		555	479	-	Met	CAT	[ENA]	◯
>WENV180694848	OCZS012750251	[OCZS] soil metagenome; soil		99	175	+	Met	CAT	[ENA]	◯
>WENV181172388	OEIV010645008	[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex		97	173	+	Met	CAT	[ENA]	◯
>WENV181381874	OFRF01020625	[OFRF] wastewater metagenome; Exp Tend CN 50WW		734	658	-	Met	CAT	[ENA]	◯
>WENV181401311	OFSF01117441	[OFSF] wastewater metagenome; Exp Tend VB 100WW		94	18	-	Met	CAT	[ENA]	◯
>C08004070	CP000884	Betaproteobacteria	Delftia acidovorans SPH-1 [CP000884]	1716400	1716327	-	Met	CAT	[Ensembl]	○
>W141276658	JADZ01000002	Betaproteobacteria	Curvibacter gracilis ATCC BAA-807 [JADZ]	20311	20387	+	Met	CAT	[ENA]	○
>WENV183710742	PDWI01052674	[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z		590	514	-	Met	CAT	[ENA]	◯
>WENV170556290	CXWL01006701	[CXWL] groundwater metagenome; biofilm material		13020	13096	+	Met	CAT	[ENA]	◯
>WENV170609364	FUWD011382941	[FUWD] metagenome; unknown		243	319	+	Met	CAT	[ENA]	◯
>W141484637	JFYT01000086	Betaproteobacteria	Delftia sp. RIT313 [JFYT]	13502	13578	+	Met	CAT	[ENA]	○
>C181088978	CP023687	Betaproteobacteria	Paracidovorax citrulli KACC17005 [CP023687]	3599667	3599591	-	Met	CAT	-	○
>C191063769	CP029373	Betaproteobacteria	Paracidovorax citrulli M6 [CP029373]	2840310	2840386	+	Met	CAT	-	○
>W141701610	JMKU01000002	Betaproteobacteria	Paracidovorax oryzae ATCC 19882 [JMKU]	253794	253870	+	Met	CAT	[ENA]	○
>W141789919	JOUB01000005	Betaproteobacteria	Delftia acidovorans [JOUB]	998713	998637	-	Met	CAT	[ENA]	○
>W09106070	AASX01000002	Betaproteobacteria	Paracidovorax citrulli subsp. citrulli AAC00-1 [AASX]	397700	397624	-	Met	CAT	[ENA]	○
>W1910744104	MHZY01000127	Betaproteobacteria	Rhodoferax sp. RIFCSPLOWO2_12_FULL_60_11 [MHZY]	234	158	-	Met	CAT	[ENA]	○
>W1910888691	NESA01000002	Betaproteobacteria	Limnohabitans sp. JirII-31 [NESA]	250918	250842	-	Met	CAT	[ENA]	○
>W1910888728	NESB01000002	Betaproteobacteria	Limnohabitans sp. JirII-29 [NESB]	479161	479085	-	Met	CAT	[ENA]	○
>W1911494371	OBKE01007141	Unclassified	bacterium [OBKE]	370	446	+	Met	CAT	[ENA]	○
>W1911497657	OCRO01000001	Betaproteobacteria	Delftia acidovorans ATCC 11299b [OCRO]	4580382	4580458	+	Met	CAT	[ENA]	○
>W1810071674	PEEW01000001	Betaproteobacteria	Burkholderiales bacterium 23 [PEEW]	5391959	5392035	+	Met	CAT	[ENA]	○
>W1810072151	PEFD01000001	Betaproteobacteria	Delftia sp. 60 [PEFD]	1739563	1739487	-	Met	CAT	[ENA]	○
>W1810078549	PEKB02000177	Betaproteobacteria	Delftia acidovorans B15 [PEKB]	16352	16428	+	Met	CAT	[ENA]	○
>SRA1004289	SRR002328.251807	The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)		82	158	+	Met	CAT	[SRA]
>SRA1006219	SRR016610.313319	Metagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)		138	62	-	Met	CAT	[SRA]
>W1810573130	QEKN01000001	Betaproteobacteria	Paracidovorax citrulli AAC00-1 #5684 [QEKN]	3286647	3286723	+	Met	CAT	[ENA]	○
>W1810672037	QJTC01000025	Betaproteobacteria	Xylophilus ampelinus CECT 7646 [QJTC]	5448	5372	-	Met	CAT	[ENA]	○
>W1810696116	QLTA01000003	Betaproteobacteria	Paracidovorax anthurii CFPB 3232 [QLTA]	154185	154261	+	Met	CAT	[ENA]	○
>W1810759426	QPJK01000002	Betaproteobacteria	Pseudorhodoferax soli DSM 21634 [QPJK]	590048	589972	-	Met	CAT	[ENA]	○
>W1810759940	QPJU01000010	Betaproteobacteria	Extensimonas vulgaris DSM 100911 [QPJU]	6630	6554	-	Met	CAT	[ENA]	○
>W1810885139	QUNC01000001	Betaproteobacteria	Paracidovorax citrulli AAC00-1 #5596 [QUNC]	3600456	3600380	-	Met	CAT	[ENA]	○
>W10110544	ADCB01000004	Betaproteobacteria	Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]	19537	19613	+	Met	CAT	[ENA]	○
>C11100127	CP002521	Betaproteobacteria	Paracidovorax avenae ATCC 19860 [CP002521]	891080	891156	+	Met	CAT	[Ensembl]	○
>C11106993	CP002735	Betaproteobacteria	Delftia sp. Cs1-4 [CP002735]	5625623	5625699	+	Met	CAT	[Ensembl]	○
>W11112981	ADCB01000004	Betaproteobacteria	Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]	19537	19613	+	Met	CAT	[ENA]	○
>W1510766094	JANU01000042	Betaproteobacteria	Caenimonas sp. SL110 [JANU]	139440	139516	+	Met	CAT	[ENA]	○
>C11118983	CP000245	Betaproteobacteria	Ramlibacter tataouinensis TTB310 [CP000245]	3657410	3657486	+	Met	CAT	[Ensembl]	○
>W1511503081	JXDJ01000025	Betaproteobacteria	Paracidovorax citrulli tw6 [JXDJ]	416247	416323	+	Met	CAT	[ENA]	○
>W1511527434	JYHM01000021	Betaproteobacteria	Paracidovorax citrulli pslbtw65 [JYHM]	305753	305677	-	Met	CAT	[ENA]	○
>W11170777	AFPT01000120	Betaproteobacteria	Paracidovorax oryzae subsp. avenae RS-1 [AFPT]	1888	1812	-	Met	CAT	[ENA]	○
>W1610074339	BCWP01000001	Betaproteobacteria	Curvibacter delicatus NBRC 14919 [BCWP]	62592	62516	-	Met	CAT	[ENA]	○
>W1610077621	BCZP01000008	Betaproteobacteria	Delftia acidovorans NBRC 14950 [BCZP]	37903	37827	-	Met	CAT	[ENA]	○
>W1610599184	LFJT01000015	Betaproteobacteria	Delftia sp. JD2 [LFJT]	112723	112647	-	Met	CAT	[ENA]	○
>W1610686300	LKUW01000052	Betaproteobacteria	Paracidovorax citrulli [LKUW]	204630	204554	-	Met	CAT	[ENA]	○
>W1610732838	LMKO01000001	Betaproteobacteria	Xylophilus sp. Leaf220 [LMKO]	948476	948552	+	Met	CAT	[ENA]	○
>W1610735752	LMMT01000012	Betaproteobacteria	Pseudorhodoferax sp. Leaf265 [LMMT]	502987	503063	+	Met	CAT	[ENA]	○
>W1610735866	LMMV01000022	Betaproteobacteria	Pseudorhodoferax sp. Leaf267 [LMMV]	223894	223818	-	Met	CAT	[ENA]	○
>W1610736071	LMNA01000002	Betaproteobacteria	Pseudorhodoferax sp. Leaf274 [LMNA]	184766	184842	+	Met	CAT	[ENA]	○
>W1610981567	LWCN01000004	Betaproteobacteria	Delftia sp. GW456-R20 [LWCN]	2507518	2507594	+	Met	CAT	[ENA]	○
>W1710071457	BCWP01000001	Betaproteobacteria	Curvibacter delicatus NBRC 14919 [BCWP]	62592	62516	-	Met	CAT	[ENA]	○
>W1710075259	BCZP01000008	Betaproteobacteria	Delftia acidovorans NBRC 14950 [BCZP]	37903	37827	-	Met	CAT	[ENA]	○
>W1710512057	FMZC01000003	Betaproteobacteria	Paracidovorax valerianellae [FMZC]	408630	408554	-	Met	CAT	[ENA]	○
>W1710519703	FNEY01000002	Betaproteobacteria	Paracidovorax citrulli [FNEY]	149696	149772	+	Met	CAT	[ENA]	○
>W1710525315	FNJL01000020	Betaproteobacteria	Paracidovorax cattleyae [FNJL]	103175	103251	+	Met	CAT	[ENA]	○
>W1710547358	FOCW01000001	Betaproteobacteria	Brachymonas denitrificans DSM 15123 [FOCW]	299794	299870	+	Met	CAT	[ENA]	○
>W1710559444	FOMQ01000007	Betaproteobacteria	Paracidovorax konjaci [FOMQ]	85022	84946	-	Met	CAT	[ENA]	○
>W1710720542	LFJT01000015	Betaproteobacteria	Delftia sp. JD2 [LFJT]	112723	112647	-	Met	CAT	[ENA]	○
Identical group No.538063 (1 seq.)
>SRA1006213	SRR016610.294728	Metagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)		102	27	-	Met	CAT	[SRA]