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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Metagenomic analysis of viruses in reclaimed water (SRP000673)
Anticodon = CAG
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180652 (232 seq.)
>W1710863119
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572372
572288
-
Leu
CAG
[ENA]
¡û
>W1710863120
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572259
572175
-
Leu
CAG
[ENA]
¡û
>W1710863121
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572035
571951
-
Leu
CAG
[ENA]
¡û
>W1710863122
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
571810
571726
-
Leu
CAG
[ENA]
¡û
>W1710864577
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
59860
59776
-
Leu
CAG
[ENA]
¡û
>W1710864578
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
58478
58394
-
Leu
CAG
[ENA]
¡û
>W1710875430
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478484
478400
-
Leu
CAG
[ENA]
¡û
>W1710875431
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478338
478254
-
Leu
CAG
[ENA]
¡û
>W1710875432
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478145
478061
-
Leu
CAG
[ENA]
¡û
>W131002769
AGZI01000051
Betaproteobacteria
Massilia timonae CCUG 45783 [AGZI]
55788
55704
-
Leu
CAG
[ENA]
¡û
>W131002771
AGZI01000052
Betaproteobacteria
Massilia timonae CCUG 45783 [AGZI]
205
121
-
Leu
CAG
[ENA]
¡û
>W131002772
AGZI01000052
Betaproteobacteria
Massilia timonae CCUG 45783 [AGZI]
87
3
-
Leu
CAG
[ENA]
¡û
>W131045995
AMSA01000002
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
2627
2543
-
Leu
CAG
[ENA]
¡û
>W131045996
AMSA01000002
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
2280
2196
-
Leu
CAG
[ENA]
¡û
>W131046009
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
193314
193230
-
Leu
CAG
[ENA]
¡û
>W131046020
AMSA01000005
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
343769
343685
-
Leu
CAG
[ENA]
¡û
>W131046051
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
205365
205281
-
Leu
CAG
[ENA]
¡û
>W131046056
AMSB01000002
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
103129
103213
+
Leu
CAG
[ENA]
¡û
>W131046057
AMSB01000002
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
103476
103560
+
Leu
CAG
[ENA]
¡û
>W131062270
ANJR01000016
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
181274
181190
-
Leu
CAG
[ENA]
¡û
>W131062274
ANJR01000019
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
208904
208988
+
Leu
CAG
[ENA]
¡û
>W131160020
AQWD01000211
Betaproteobacteria
Oxalobacteraceae bacterium JGI 0001004-K23 [AQWD]
10504
10588
+
Leu
CAG
[ENA]
¡û
>W131160021
AQWD01000211
Betaproteobacteria
Oxalobacteraceae bacterium JGI 0001004-K23 [AQWD]
10697
10781
+
Leu
CAG
[ENA]
¡û
>W131181044
ARNP01000097
Betaproteobacteria
Massilia niastensis DSM 21313 [ARNP]
31990
32074
+
Leu
CAG
[ENA]
¡û
>W131181046
ARNP01000098
Betaproteobacteria
Massilia niastensis DSM 21313 [ARNP]
5
89
+
Leu
CAG
[ENA]
¡û
>W131219560
ATYR01000006
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
203514
203430
-
Leu
CAG
[ENA]
¡û
>W131219561
ATYR01000006
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
203370
203286
-
Leu
CAG
[ENA]
¡û
>W131219562
ATYR01000006
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
203226
203142
-
Leu
CAG
[ENA]
¡û
>W131219563
ATYR01000006
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
203091
203007
-
Leu
CAG
[ENA]
¡û
>W131225124
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
122233
122317
+
Leu
CAG
[ENA]
¡û
>W131225125
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
123616
123700
+
Leu
CAG
[ENA]
¡û
>W1711430718
MIJG01000006
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
686286
686202
-
Leu
CAG
[ENA]
¡û
>W1711430731
MIJG01000008
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
1188318
1188402
+
Leu
CAG
[ENA]
¡û
>W1711430732
MIJG01000008
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
1188868
1188952
+
Leu
CAG
[ENA]
¡û
>W1711765100
MUXB01000022
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
215
131
-
Leu
CAG
[ENA]
¡û
>W1711765136
MUXB01000141
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
244
160
-
Leu
CAG
[ENA]
¡û
>W1711765144
MUXB01000183
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
96340
96256
-
Leu
CAG
[ENA]
¡û
>W1711767626
MVAD01000001
Betaproteobacteria
Massilia sp. KIM [MVAD]
1999315
1999399
+
Leu
CAG
[ENA]
¡û
>W1711767627
MVAD01000001
Betaproteobacteria
Massilia sp. KIM [MVAD]
1999457
1999541
+
Leu
CAG
[ENA]
¡û
>W1711767628
MVAD01000001
Betaproteobacteria
Massilia sp. KIM [MVAD]
1999581
1999665
+
Leu
CAG
[ENA]
¡û
>W1711767629
MVAD01000001
Betaproteobacteria
Massilia sp. KIM [MVAD]
1999706
1999790
+
Leu
CAG
[ENA]
¡û
>W1712110241
NJGU01000001
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
750877
750961
+
Leu
CAG
[ENA]
¡û
>W1712110268
NJGU01000004
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
184174
184090
-
Leu
CAG
[ENA]
¡û
>W1712110300
NJGV01000001
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
219710
219626
-
Leu
CAG
[ENA]
¡û
>W1712110301
NJGV01000001
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
219366
219282
-
Leu
CAG
[ENA]
¡û
>W1712110314
NJGV01000004
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
305763
305679
-
Leu
CAG
[ENA]
¡û
>C171021215
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
3204486
3204570
+
Leu
CAG
-
¡û
>C171021216
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
3205189
3205273
+
Leu
CAG
-
¡û
>C171021242
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
2085784
2085700
-
Leu
CAG
-
¡û
>C171085355
CP018845
Betaproteobacteria
Herbaspirillum robiniae AA6 [CP018845]
1577033
1577117
+
Leu
CAG
-
¡û
>C171085402
CP018845
Betaproteobacteria
Herbaspirillum robiniae AA6 [CP018845]
404998
404914
-
Leu
CAG
-
¡û
>C171088508
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
6295864
6295780
-
Leu
CAG
-
¡û
>C171088509
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
6295711
6295627
-
Leu
CAG
-
¡û
>C171088510
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
6295586
6295502
-
Leu
CAG
-
¡û
>C171088511
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
6295461
6295377
-
Leu
CAG
-
¡û
>WENV180014335
FPIC01177815
[FPIC] soil metagenome; Soil
85
1
-
Leu
CAG
[ENA]
¢þ
>WENV180017547
FSXF01000526
[FSXF] metagenome; soil
2537
2453
-
Leu
CAG
[ENA]
¢þ
>WENV180018278
FSYV01000169
[FSYV] metagenome; soil
17407
17491
+
Leu
CAG
[ENA]
¢þ
>WENV180019276
FTBS01000585
[FTBS] metagenome; soil
5328
5244
-
Leu
CAG
[ENA]
¢þ
>WENV180032834
FTKD01001614
[FTKD] metagenome; soil
32018
32102
+
Leu
CAG
[ENA]
¢þ
>W141003820
AEEC02000012
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
88966
88882
-
Leu
CAG
[ENA]
¡û
>W141003821
AEEC02000012
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
79156
79072
-
Leu
CAG
[ENA]
¡û
>W141003822
AEEC02000014
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
91232
91316
+
Leu
CAG
[ENA]
¡û
>WENV180374517
OBOJ01280512
[OBOJ] marine metagenome; seawater
7
91
+
Leu
CAG
[ENA]
¢þ
>WENV183726732
PJTO01000109
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
21810
21726
-
Leu
CAG
[ENA]
¢þ
>WENV183726733
PJTO01000109
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
21669
21585
-
Leu
CAG
[ENA]
¢þ
>WENV183726734
PJTO01000109
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
21529
21445
-
Leu
CAG
[ENA]
¢þ
>WENV183726735
PJTO01000109
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
21394
21310
-
Leu
CAG
[ENA]
¢þ
>WENV183727210
PJTO01013948
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
373
289
-
Leu
CAG
[ENA]
¢þ
>WENV183727925
PJTP01005943
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
790
874
+
Leu
CAG
[ENA]
¢þ
>WENV183728110
PJTP01036172
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
1
85
+
Leu
CAG
[ENA]
¢þ
>WENV183728564
PJTQ01000139
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
21702
21618
-
Leu
CAG
[ENA]
¢þ
>WENV183728565
PJTQ01000139
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
21561
21477
-
Leu
CAG
[ENA]
¢þ
>WENV183728566
PJTQ01000139
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
21421
21337
-
Leu
CAG
[ENA]
¢þ
>WENV183728567
PJTQ01000139
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
21286
21202
-
Leu
CAG
[ENA]
¢þ
>WENV183729584
PJTQ01078228
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
83
1
-
Leu
CAG
[ENA]
¢þ
>WENV183730155
PJTR01001528
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
319
403
+
Leu
CAG
[ENA]
¢þ
>WENV183730209
PJTR01004867
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
725
809
+
Leu
CAG
[ENA]
¢þ
>WENV183730274
PJTR01011605
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
487
571
+
Leu
CAG
[ENA]
¢þ
>WENV183731196
PJTS01018844
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
391
307
-
Leu
CAG
[ENA]
¢þ
>WENV183733570
PJTY01004964
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
1103
1019
-
Leu
CAG
[ENA]
¢þ
>WENV183735025
PJUA01000410
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
24523
24439
-
Leu
CAG
[ENA]
¢þ
>WENV183735026
PJUA01000410
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
14543
14459
-
Leu
CAG
[ENA]
¢þ
>WENV183735113
PJUA01001046
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
7019
6935
-
Leu
CAG
[ENA]
¢þ
>WENV183735841
PJUB01004782
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
1092
1008
-
Leu
CAG
[ENA]
¢þ
>WENV183735937
PJUB01014447
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
279
195
-
Leu
CAG
[ENA]
¢þ
>WENV183736573
PJUC01014413
[PJUC] soil metagenome; Soil enriched on filter paper
206
290
+
Leu
CAG
[ENA]
¢þ
>WENV183737155
PJUD01000680
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
14576
14660
+
Leu
CAG
[ENA]
¢þ
>WENV183737373
PJUD01005169
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3718
3634
-
Leu
CAG
[ENA]
¢þ
>WENV183737374
PJUD01005169
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3578
3494
-
Leu
CAG
[ENA]
¢þ
>WENV183737375
PJUD01005169
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3443
3359
-
Leu
CAG
[ENA]
¢þ
>WENV183738056
PJUD01073969
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
657
741
+
Leu
CAG
[ENA]
¢þ
>WENV183738176
PJUD01103267
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
276
192
-
Leu
CAG
[ENA]
¢þ
>WENV183739216
PJUE01003490
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
2216
2132
-
Leu
CAG
[ENA]
¢þ
>WENV183740693
PJUF01006489
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
2611
2695
+
Leu
CAG
[ENA]
¢þ
>WENV183740694
PJUF01006489
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
2752
2836
+
Leu
CAG
[ENA]
¢þ
>WENV183741072
PJUF01035732
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
101
185
+
Leu
CAG
[ENA]
¢þ
>WENV183741287
PJUF01074593
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
395
311
-
Leu
CAG
[ENA]
¢þ
>WENV183743603
PJUJ01009464
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
967
1051
+
Leu
CAG
[ENA]
¢þ
>WENV183743620
PJUJ01011168
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
700
784
+
Leu
CAG
[ENA]
¢þ
>ENV08001496
ABNE01016400
fish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
92
8
-
Leu
CAG
[ENA]
¡û
>WENV170559168
CXWL01112514
[CXWL] groundwater metagenome; biofilm material
5
89
+
Leu
CAG
[ENA]
¢þ
>WENV170575348
FLYN01063069
[FLYN] hot springs metagenome; Sediment
217
133
-
Leu
CAG
[ENA]
¢þ
>C181102687
CP024608
Betaproteobacteria
Massilia violaceinigra B2 [CP024608]
6334763
6334847
+
Leu
CAG
-
¡û
>C181102688
CP024608
Betaproteobacteria
Massilia violaceinigra B2 [CP024608]
6334914
6334998
+
Leu
CAG
-
¡û
>C181102689
CP024608
Betaproteobacteria
Massilia violaceinigra B2 [CP024608]
6335066
6335150
+
Leu
CAG
-
¡û
>C181163976
CP028324
Betaproteobacteria
Pseudoduganella armeniaca ZMN-3 [CP028324]
2813650
2813566
-
Leu
CAG
-
¡û
>C181163977
CP028324
Betaproteobacteria
Pseudoduganella armeniaca ZMN-3 [CP028324]
2813503
2813419
-
Leu
CAG
-
¡û
>C181163978
CP028324
Betaproteobacteria
Pseudoduganella armeniaca ZMN-3 [CP028324]
2812036
2811952
-
Leu
CAG
-
¡û
>C181177097
CP029343
Betaproteobacteria
Massilia oculi CCUG 43427 [CP029343]
759079
759163
+
Leu
CAG
-
¡û
>C181177098
CP029343
Betaproteobacteria
Massilia oculi CCUG 43427 [CP029343]
759197
759281
+
Leu
CAG
-
¡û
>C181177099
CP029343
Betaproteobacteria
Massilia oculi CCUG 43427 [CP029343]
759319
759403
+
Leu
CAG
-
¡û
>C181177100
CP029343
Betaproteobacteria
Massilia oculi CCUG 43427 [CP029343]
759451
759535
+
Leu
CAG
-
¡û
>C181187728
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
2323950
2324034
+
Leu
CAG
-
¡û
>C181187729
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
2324112
2324196
+
Leu
CAG
-
¡û
>C181187730
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
2325582
2325666
+
Leu
CAG
-
¡û
>C191029346
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
3495343
3495427
+
Leu
CAG
-
¡û
>C191029347
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
3497432
3497516
+
Leu
CAG
-
¡û
>C191029373
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
2039793
2039709
-
Leu
CAG
-
¡û
>C191124242
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
3165548
3165632
+
Leu
CAG
-
¡û
>C191124243
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
3166247
3166331
+
Leu
CAG
-
¡û
>C191124244
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
3182340
3182424
+
Leu
CAG
-
¡û
>C191124270
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
1971554
1971470
-
Leu
CAG
-
¡û
>C191156629
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
3345662
3345746
+
Leu
CAG
-
¡û
>C191156630
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
3346006
3346090
+
Leu
CAG
-
¡û
>C191156660
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2124300
2124216
-
Leu
CAG
-
¡û
>C191157322
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
5864582
5864498
-
Leu
CAG
-
¡û
>W141739258
JNNN01000054
Betaproteobacteria
Massilia sp. LC238 [JNNN]
14405
14321
-
Leu
CAG
[ENA]
¡û
>W141739259
JNNN01000054
Betaproteobacteria
Massilia sp. LC238 [JNNN]
14262
14178
-
Leu
CAG
[ENA]
¡û
>W141739260
JNNN01000054
Betaproteobacteria
Massilia sp. LC238 [JNNN]
14118
14034
-
Leu
CAG
[ENA]
¡û
>W141739261
JNNN01000054
Betaproteobacteria
Massilia sp. LC238 [JNNN]
13973
13889
-
Leu
CAG
[ENA]
¡û
>W141811319
JPXI01000039
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
116337
116421
+
Leu
CAG
[ENA]
¡û
>W141811320
JPXI01000039
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
116479
116563
+
Leu
CAG
[ENA]
¡û
>W141811321
JPXI01000039
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
116621
116705
+
Leu
CAG
[ENA]
¡û
>W141811322
JPXI01000039
Betaproteobacteria
Massilia sp. BSC265 consociata [JPXI]
116764
116848
+
Leu
CAG
[ENA]
¡û
>W141821411
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
855821
855737
-
Leu
CAG
[ENA]
¡û
>W141821412
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
855686
855602
-
Leu
CAG
[ENA]
¡û
>W141821413
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
855554
855470
-
Leu
CAG
[ENA]
¡û
>W141821414
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
855422
855338
-
Leu
CAG
[ENA]
¡û
>W1910576143
JSAB01000297
Betaproteobacteria
Massilia aurea CFS-1 [JSAB]
4476
4560
+
Leu
CAG
[ENA]
¡û
>W1910576144
JSAB01000297
Betaproteobacteria
Massilia aurea CFS-1 [JSAB]
4632
4716
+
Leu
CAG
[ENA]
¡û
>W1910576145
JSAB01000297
Betaproteobacteria
Massilia aurea CFS-1 [JSAB]
4792
4876
+
Leu
CAG
[ENA]
¡û
>W1910577838
JUGD01000004
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
288113
288197
+
Leu
CAG
[ENA]
¡û
>W1910577857
JUGD01000011
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
171345
171261
-
Leu
CAG
[ENA]
¡û
>W1910577858
JUGD01000011
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
171002
170918
-
Leu
CAG
[ENA]
¡û
>W1910578283
JWJC01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
194922
194838
-
Leu
CAG
[ENA]
¡û
>W1910578299
JWJC01000014
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
91883
91967
+
Leu
CAG
[ENA]
¡û
>W1910578300
JWJC01000014
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
92227
92311
+
Leu
CAG
[ENA]
¡û
>W1911618994
PPXQ01000012
Betaproteobacteria
Massilia sp. Mn16-1_5 [PPXQ]
150963
151047
+
Leu
CAG
[ENA]
¡û
>W1911618995
PPXQ01000012
Betaproteobacteria
Massilia sp. Mn16-1_5 [PPXQ]
151109
151193
+
Leu
CAG
[ENA]
¡û
>W1911618996
PPXQ01000012
Betaproteobacteria
Massilia sp. Mn16-1_5 [PPXQ]
151259
151343
+
Leu
CAG
[ENA]
¡û
>W1911802877
QYUP01000155
Betaproteobacteria
Massilia cavernae K1S02-61 [QYUP]
9774
9690
-
Leu
CAG
[ENA]
¡û
>SRA1001579
SRR001072.33412
Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160)
92
8
-
Leu
CAG
[SRA]
>W1810194032
PKOI01000003
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
117422
117338
-
Leu
CAG
[ENA]
¡û
>W1810194033
PKOI01000003
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
107442
107358
-
Leu
CAG
[ENA]
¡û
>W1810194071
PKOI01000030
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
23718
23802
+
Leu
CAG
[ENA]
¡û
>W1810330118
PUIP01000005
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
353904
353988
+
Leu
CAG
[ENA]
¡û
>W1810330119
PUIP01000005
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
354021
354105
+
Leu
CAG
[ENA]
¡û
>W1810330160
PUIP01000030
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
22
106
+
Leu
CAG
[ENA]
¡û
>SRA1005768
SRR014587.72967
Metagenomic analysis of viruses in reclaimed water (SRP000673)
241
157
-
Leu
CAG
[SRA]
>SRA1005781
SRR014587.101448
Metagenomic analysis of viruses in reclaimed water (SRP000673)
48
132
+
Leu
CAG
[SRA]
>W1810673333
QJTZ01000088
Gammaproteobacteria
Pseudomonas syringae pv. pisi 1452A [QJTZ]
19317
19401
+
Leu
CAG
[ENA]
¡û
>W1810673334
QJTZ01000088
Gammaproteobacteria
Pseudomonas syringae pv. pisi 1452A [QJTZ]
19435
19519
+
Leu
CAG
[ENA]
¡û
>W1810673335
QJTZ01000088
Gammaproteobacteria
Pseudomonas syringae pv. pisi 1452A [QJTZ]
19557
19641
+
Leu
CAG
[ENA]
¡û
>W1810673336
QJTZ01000088
Gammaproteobacteria
Pseudomonas syringae pv. pisi 1452A [QJTZ]
19717
19801
+
Leu
CAG
[ENA]
¡û
>C151087578
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
3335344
3335428
+
Leu
CAG
[Ensembl]
¡û
>C151087579
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
3335894
3335978
+
Leu
CAG
[Ensembl]
¡û
>C151087605
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
2111217
2111133
-
Leu
CAG
[Ensembl]
¡û
>C10107813
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
3334822
3334906
+
Leu
CAG
[Ensembl]
¡û
>C10107838
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
2111458
2111374
-
Leu
CAG
[Ensembl]
¡û
>W1511310192
JPQD01000013
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
96
180
+
Leu
CAG
[ENA]
¡û
>W1511310197
JPQD01000015
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
172
88
-
Leu
CAG
[ENA]
¡û
>W1511657405
LELH02000003
Betaproteobacteria
Massilia sp. WF1 [LELH]
68506
68422
-
Leu
CAG
[ENA]
¡û
>W1511683760
LFLS01000001
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
27443
27359
-
Leu
CAG
[ENA]
¡û
>W1511683809
LFLT01000001
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
297437
297353
-
Leu
CAG
[ENA]
¡û
>W1511683833
LFLT01000011
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
66771
66855
+
Leu
CAG
[ENA]
¡û
>C161043216
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
2523776
2523692
-
Leu
CAG
-
¡û
>C161043217
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
2523655
2523571
-
Leu
CAG
-
¡û
>C161043218
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
2523524
2523440
-
Leu
CAG
-
¡û
>C161043219
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
2523400
2523316
-
Leu
CAG
-
¡û
>C161060451
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
3437156
3437240
+
Leu
CAG
[Ensembl]
¡û
>C161060452
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
3437502
3437586
+
Leu
CAG
[Ensembl]
¡û
>C161060478
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
2026314
2026230
-
Leu
CAG
[Ensembl]
¡û
>W121068701
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
1669510
1669594
+
Leu
CAG
[ENA]
¡û
>W121068702
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
1669855
1669939
+
Leu
CAG
[ENA]
¡û
>W121068715
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
603893
603809
-
Leu
CAG
[ENA]
¡û
>W121085180
AKJA01000120
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
54530
54446
-
Leu
CAG
[ENA]
¡û
>W1610070417
BCTG01000001
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
58149
58065
-
Leu
CAG
[ENA]
¡û
>W1610070423
BCTG01000003
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
182369
182285
-
Leu
CAG
[ENA]
¡û
>W1610071850
BCUJ01000015
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
367
283
-
Leu
CAG
[ENA]
¡û
>W1610071869
BCUJ01000049
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
3623
3539
-
Leu
CAG
[ENA]
¡û
>W1610071873
BCUJ01000081
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
250
334
+
Leu
CAG
[ENA]
¡û
>W1610093142
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658595
3658511
-
Leu
CAG
[ENA]
¡û
>W1610093143
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658433
3658349
-
Leu
CAG
[ENA]
¡û
>W1610093144
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658282
3658198
-
Leu
CAG
[ENA]
¡û
>W1610163436
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658595
3658511
-
Leu
CAG
[ENA]
¡û
>W1610163437
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658433
3658349
-
Leu
CAG
[ENA]
¡û
>W1610163438
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658282
3658198
-
Leu
CAG
[ENA]
¡û
>W1610725465
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572372
572288
-
Leu
CAG
[ENA]
¡û
>W1610725466
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572259
572175
-
Leu
CAG
[ENA]
¡û
>W1610725467
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
572035
571951
-
Leu
CAG
[ENA]
¡û
>W1610725468
LMEW01000012
Betaproteobacteria
Massilia sp. Root133 [LMEW]
571810
571726
-
Leu
CAG
[ENA]
¡û
>W1610726923
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
59860
59776
-
Leu
CAG
[ENA]
¡û
>W1610726924
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
58478
58394
-
Leu
CAG
[ENA]
¡û
>W1610737776
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478484
478400
-
Leu
CAG
[ENA]
¡û
>W1610737777
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478338
478254
-
Leu
CAG
[ENA]
¡û
>W1610737778
LMOJ01000022
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
478145
478061
-
Leu
CAG
[ENA]
¡û
>W1710067790
BCTG01000001
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
58149
58065
-
Leu
CAG
[ENA]
¡û
>W1710067796
BCTG01000003
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
182369
182285
-
Leu
CAG
[ENA]
¡û
>W1710069052
BCUJ01000015
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
367
283
-
Leu
CAG
[ENA]
¡û
>W1710069071
BCUJ01000049
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
3623
3539
-
Leu
CAG
[ENA]
¡û
>W1710069075
BCUJ01000081
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
250
334
+
Leu
CAG
[ENA]
¡û
>W1710096350
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658595
3658511
-
Leu
CAG
[ENA]
¡û
>W1710096351
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658433
3658349
-
Leu
CAG
[ENA]
¡û
>W1710096352
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
3658282
3658198
-
Leu
CAG
[ENA]
¡û
>W1710165103
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658595
3658511
-
Leu
CAG
[ENA]
¡û
>W1710165104
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658433
3658349
-
Leu
CAG
[ENA]
¡û
>W1710165105
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
3658282
3658198
-
Leu
CAG
[ENA]
¡û
>W1710512856
FMZS01000010
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
81825
81741
-
Leu
CAG
[ENA]
¡û
>W1710512857
FMZS01000010
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
81712
81628
-
Leu
CAG
[ENA]
¡û
>W1710512858
FMZS01000010
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
81588
81504
-
Leu
CAG
[ENA]
¡û
>W1710512859
FMZS01000010
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
81465
81381
-
Leu
CAG
[ENA]
¡û
>W1710557564
FOLD01000002
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
61220
61304
+
Leu
CAG
[ENA]
¡û
>W1710557565
FOLD01000002
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
61373
61457
+
Leu
CAG
[ENA]
¡û
>W1710561532
FOOF01000012
Betaproteobacteria
Duganella sp. CF458 [FOOF]
25310
25226
-
Leu
CAG
[ENA]
¡û
>W1710561533
FOOF01000012
Betaproteobacteria
Duganella sp. CF458 [FOOF]
23927
23843
-
Leu
CAG
[ENA]
¡û
>W1710561534
FOOF01000012
Betaproteobacteria
Duganella sp. CF458 [FOOF]
23667
23583
-
Leu
CAG
[ENA]
¡û
>W1710561535
FOOF01000012
Betaproteobacteria
Duganella sp. CF458 [FOOF]
23549
23465
-
Leu
CAG
[ENA]
¡û
>W1710641537
JRYB01000001
Betaproteobacteria
Massilia timonae [JRYB]
5345110
5345194
+
Leu
CAG
[ENA]
¡û
>W1710641538
JRYB01000001
Betaproteobacteria
Massilia timonae [JRYB]
5345228
5345312
+
Leu
CAG
[ENA]
¡û
>W1710641539
JRYB01000001
Betaproteobacteria
Massilia timonae [JRYB]
5345350
5345434
+
Leu
CAG
[ENA]
¡û
>W1710641540
JRYB01000001
Betaproteobacteria
Massilia timonae [JRYB]
5345510
5345594
+
Leu
CAG
[ENA]
¡û
Identical group No.398802 (1 seq.)
>SRA1005741
SRR014586.224245
Metagenomic analysis of viruses in reclaimed water (SRP000673)
138
62
-
Leu
CAG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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