tRNA genes clustered and arranged according to each identical group

Metagenomic analysis of viruses in reclaimed water (SRP000673)

Anticodon = GCA

HIT: 5 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.780352 (26 seq.)
>W1711075729 LSKR01000172 Actinomycetota Corynebacterium durum [LSKR] 97838 97765 - Cys GCA [ENA] ¡û
>W1711269075 LZDO01000034 Gammaproteobacteria Moraxella osloensis [LZDO] 16052 16125 + Cys GCA [ENA] ¡û
>W1711269142 LZDQ01000001 Gammaproteobacteria Moraxella osloensis [LZDQ] 989515 989588 + Cys GCA [ENA] ¡û
>W1711282126 LZMT01000059 Gammaproteobacteria Moraxella osloensis [LZMT] 73593 73666 + Cys GCA [ENA] ¡û
>W1711511504 MLCM01000003 Alphaproteobacteria Enhydrobacter sp. H5 [MLCM] 38133 38060 - Cys GCA [ENA] ¡û
>WENV180284138 OBID01017486 [OBID] metagenome; sludge 693 620 - Cys GCA [ENA] ¢þ
>W141073506 ASSF01000119 Bacillota Paenibacillus sophorae S27 [ASSF] 12486 12559 + Cys GCA [ENA] ¡û
>WENV181201567 OERO01005529 [OERO] metagenome; water of meat washing 791 718 - Cys GCA [ENA] ¢þ
>WENV181227525 OFDN01014554 [OFDN] hot springs metagenome; Water 2407 2480 + Cys GCA [ENA] ¢þ
>C181001867 AP017381 Gammaproteobacteria Moraxella osloensis KMC41 [AP017381] 1582768 1582841 + Cys GCA - ¡û
>C181096901 CP024176 Gammaproteobacteria Moraxella osloensis YHS [CP024176] 1621625 1621698 + Cys GCA - ¡û
>C181096948 CP024180 Gammaproteobacteria Moraxella osloensis KSH [CP024180] 1534351 1534424 + Cys GCA - ¡û
>C181096995 CP024185 Gammaproteobacteria Moraxella osloensis TT16 [CP024185] 1620690 1620763 + Cys GCA - ¡û
>W1910871583 NCXF01000003 Gammaproteobacteria Moraxella osloensis OG2 [NCXF] 197029 197102 + Cys GCA [ENA] ¡û
>W1810190239 PKJS01000001 Gammaproteobacteria Moraxella osloensis UMB0416 [PKJS] 129806 129733 - Cys GCA [ENA] ¡û
>SRA1005791 SRR014587.154814 Metagenomic analysis of viruses in reclaimed water (SRP000673) 160 87 - Cys GCA [SRA]
>SRA1005802 SRR014587.178953 Metagenomic analysis of viruses in reclaimed water (SRP000673) 160 87 - Cys GCA [SRA]
>SRA1005825 SRR014587.237357 Metagenomic analysis of viruses in reclaimed water (SRP000673) 148 221 + Cys GCA [SRA]
>W10106184 ACYI01000002 Alphaproteobacteria Enhydrobacter aerosaccus SK60 [ACYI] 46077 46004 - Cys GCA [ENA] ¡û
>W11108507 ACYI01000002 Alphaproteobacteria Enhydrobacter aerosaccus SK60 [ACYI] 46077 46004 - Cys GCA [ENA] ¡û
>W1511705952 LGSW01000004 Alphaproteobacteria Enhydrobacter aerosaccus CGMCC9176 [LGSW] 72906 72833 - Cys GCA [ENA] ¡û
>C161069205 CP014234 Gammaproteobacteria Moraxella osloensis CCUG 350 [CP014234] 653090 653163 + Cys GCA [Ensembl] ¡û
>W1610915034 LSKR01000172 Actinomycetota Corynebacterium durum [LSKR] 97838 97765 - Cys GCA [ENA] ¡û
>W1611029887 LZDO01000034 Gammaproteobacteria Moraxella osloensis [LZDO] 16052 16125 + Cys GCA [ENA] ¡û
>W1611029954 LZDQ01000001 Gammaproteobacteria Moraxella osloensis [LZDQ] 989515 989588 + Cys GCA [ENA] ¡û
>W1611041337 LZMT01000059 Gammaproteobacteria Moraxella osloensis [LZMT] 73593 73666 + Cys GCA [ENA] ¡û
Identical group No.782404 (38 seq.)
>W131002759 AGZI01000028 Betaproteobacteria Massilia timonae CCUG 45783 [AGZI] 23829 23902 + Cys GCA [ENA] ¡û
>W1710863170 LMEW01000036 Betaproteobacteria Massilia sp. Root133 [LMEW] 281384 281457 + Cys GCA [ENA] ¡û
>W1710864693 LMGB01000037 Betaproteobacteria Massilia sp. Root1485 [LMGB] 281886 281959 + Cys GCA [ENA] ¡û
>W1710875408 LMOJ01000001 Betaproteobacteria Massilia sp. Leaf139 [LMOJ] 594935 595008 + Cys GCA [ENA] ¡û
>W131181072 ARNP01000130 Betaproteobacteria Massilia niastensis DSM 21313 [ARNP] 689 762 + Cys GCA [ENA] ¡û
>W131219548 ATYR01000001 Betaproteobacteria Massilia alkalitolerans DSM 17462 [ATYR] 214883 214810 - Cys GCA [ENA] ¡û
>W131237340 AUOA01000044 Betaproteobacteria Oxalobacteraceae bacterium JGI 0001002-H16 [AUOA] 3547 3620 + Cys GCA [ENA] ¡û
>W1711767620 MVAD01000001 Betaproteobacteria Massilia sp. KIM [MVAD] 524735 524808 + Cys GCA [ENA] ¡û
>C171088549 CP019038 Betaproteobacteria Massilia putida 6NM-7 [CP019038] 1772564 1772491 - Cys GCA - ¡û
>WENV180014203 FPIC01095619 [FPIC] soil metagenome; Soil 202 129 - Cys GCA [ENA] ¢þ
>WENV183726540 PJTO01000003 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 401503 401430 - Cys GCA [ENA] ¢þ
>WENV183728296 PJTQ01000010 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 401503 401430 - Cys GCA [ENA] ¢þ
>WENV183737183 PJUD01001097 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 5710 5783 + Cys GCA [ENA] ¢þ
>WENV183741048 PJUF01031905 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 264 337 + Cys GCA [ENA] ¢þ
>WENV170574832 FLYN01011416 [FLYN] hot springs metagenome; Sediment 169 96 - Cys GCA [ENA] ¢þ
>WENV170708471 LNAP01085418 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 744 671 - Cys GCA [ENA] ¢þ
>C181163970 CP028324 Betaproteobacteria Pseudoduganella armeniaca ZMN-3 [CP028324] 4447860 4447787 - Cys GCA - ¡û
>C181177134 CP029343 Betaproteobacteria Massilia oculi CCUG 43427 [CP029343] 5033884 5033957 + Cys GCA - ¡û
>C181187723 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 601542 601615 + Cys GCA - ¡û
>C191150777 CP036401 Betaproteobacteria Pseudoduganella albidiflava DSM 17472 [CP036401] 1804278 1804351 + Cys GCA - ¡û
>C191157362 CP038026 Betaproteobacteria Pseudoduganella plicata DSM 17505 [CP038026] 1518457 1518384 - Cys GCA - ¡û
>C191174022 CP040017 Betaproteobacteria Pseudoduganella umbonata DSMZ 26121 [CP040017] 2731150 2731077 - Cys GCA - ¡û
>W141739230 JNNN01000019 Betaproteobacteria Massilia sp. LC238 [JNNN] 85683 85756 + Cys GCA [ENA] ¡û
>W141811288 JPXI01000023 Betaproteobacteria Massilia sp. BSC265 consociata [JPXI] 108371 108298 - Cys GCA [ENA] ¡û
>W141821404 JQNN01000001 Betaproteobacteria Massilia sp. 9096 [JQNN] 2335132 2335059 - Cys GCA [ENA] ¡û
>W1911618971 PPXQ01000002 Betaproteobacteria Massilia sp. Mn16-1_5 [PPXQ] 313292 313365 + Cys GCA [ENA] ¡û
>W1810330109 PUIP01000001 Betaproteobacteria Massilia phosphatilytica 12-OD1 [PUIP] 429139 429212 + Cys GCA [ENA] ¡û
>SRA1005830 SRR014587.253382 Metagenomic analysis of viruses in reclaimed water (SRP000673) 70 143 + Cys GCA [SRA]
>W1810673288 QJTZ01000019 Gammaproteobacteria Pseudomonas syringae pv. pisi 1452A [QJTZ] 139952 140025 + Cys GCA [ENA] ¡û
>W1511310222 JPQD01000071 Betaproteobacteria Massilia sp. JS1662 [JPQD] 232 305 + Cys GCA [ENA] ¡û
>W1511657436 LELH02000025 Betaproteobacteria Massilia sp. WF1 [LELH] 2787 2714 - Cys GCA [ENA] ¡û
>C161043210 CP012640 Betaproteobacteria Massilia sp. WG5 [CP012640] 4301633 4301560 - Cys GCA - ¡û
>W1610725516 LMEW01000036 Betaproteobacteria Massilia sp. Root133 [LMEW] 281384 281457 + Cys GCA [ENA] ¡û
>W1610727039 LMGB01000037 Betaproteobacteria Massilia sp. Root1485 [LMGB] 281886 281959 + Cys GCA [ENA] ¡û
>W1610737754 LMOJ01000001 Betaproteobacteria Massilia sp. Leaf139 [LMOJ] 594935 595008 + Cys GCA [ENA] ¡û
>W1710512848 FMZS01000008 Betaproteobacteria Massilia sp. PDC64 [FMZS] 430163 430236 + Cys GCA [ENA] ¡û
>W1710557608 FOLD01000025 Betaproteobacteria Massilia yuzhufengensis [FOLD] 953 880 - Cys GCA [ENA] ¡û
>W1710641530 JRYB01000001 Betaproteobacteria Massilia timonae [JRYB] 3672197 3672270 + Cys GCA [ENA] ¡û
Identical group No.788319 (1 seq.)
>SRA1005905 SRR014589.35126 Metagenomic analysis of viruses in reclaimed water (SRP000673) 118 191 + Cys GCA [SRA]
Identical group No.816025 (1 seq.)
>SRA1005801 SRR014587.171154 Metagenomic analysis of viruses in reclaimed water (SRP000673) 70 -1 - Cys GCA [SRA]
Identical group No.818446 (2 seq.)
>SRA1005676 SRR014586.118424 Metagenomic analysis of viruses in reclaimed water (SRP000673) 40 113 + Cys GCA [SRA]
>SRA1005701 SRR014586.153085 Metagenomic analysis of viruses in reclaimed water (SRP000673) 71 1 - Cys GCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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