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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Metagenomic characterization of a wastewater treatment plant (SRP000180)
Anticodon = CAC
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.654837 (121 seq.)
>W1710777635
LJBT01000010
Acidithiobacillia
Acidithiobacillus ferrooxidans [LJBT]
76058
75984
-
Val
CAC
[ENA]
¡û
>W1710785340
LJHT01000102
Betaproteobacteria
beta proteobacterium AAP51 [LJHT]
29077
29151
+
Val
CAC
[ENA]
¡û
>W1710861843
LMDY01000001
Betaproteobacteria
Methylibium sp. Root1272 [LMDY]
16341
16415
+
Val
CAC
[ENA]
¡û
>W1711010497
LQRJ01000071
Acidithiobacillia
Acidithiobacillus ferrooxidans [LQRJ]
75991
75917
-
Val
CAC
[ENA]
¡û
>W1711220210
LXQG01000109
Acidithiobacillia
Acidithiobacillus caldus [LXQG]
9874
9948
+
Val
CAC
[ENA]
¡û
>W1711292965
LZYE01000184
Acidithiobacillia
Acidithiobacillus caldus [LZYE]
9873
9947
+
Val
CAC
[ENA]
¡û
>W1711293007
LZYF01000113
Acidithiobacillia
Acidithiobacillus caldus [LZYF]
9873
9947
+
Val
CAC
[ENA]
¡û
>W1711293052
LZYG01000116
Acidithiobacillia
Acidithiobacillus caldus [LZYG]
9873
9947
+
Val
CAC
[ENA]
¡û
>W1711293098
LZYH01000607
Acidithiobacillia
Acidithiobacillus caldus [LZYH]
9873
9947
+
Val
CAC
[ENA]
¡û
>W1711387290
MEGM01000172
Betaproteobacteria
Rubrivivax sp. SCN 70-15 [MEGM]
3370
3296
-
Val
CAC
[ENA]
¡û
>W1711793344
MWLO01000058
Betaproteobacteria
Ideonella sp. A 288 A 288 [MWLO]
8845
8771
-
Val
CAC
[ENA]
¡û
>W1712102903
NIOE01000006
Betaproteobacteria
Roseateles noduli HZ7 [NIOE]
306983
307057
+
Val
CAC
[ENA]
¡û
>W1712102904
NIOE01000006
Betaproteobacteria
Roseateles noduli HZ7 [NIOE]
307121
307195
+
Val
CAC
[ENA]
¡û
>W1712102955
NIOF01000001
Betaproteobacteria
Roseateles aquatilis [NIOF]
330495
330421
-
Val
CAC
[ENA]
¡û
>W1712102956
NIOF01000001
Betaproteobacteria
Roseateles aquatilis [NIOF]
330367
330293
-
Val
CAC
[ENA]
¡û
>W1712102999
NIOG01000001
Betaproteobacteria
Roseateles terrae [NIOG]
415381
415455
+
Val
CAC
[ENA]
¡û
>W1712105736
NISI01000008
Betaproteobacteria
Roseateles puraquae [NISI]
49006
49080
+
Val
CAC
[ENA]
¡û
>W1712105737
NISI01000008
Betaproteobacteria
Roseateles puraquae [NISI]
49120
49194
+
Val
CAC
[ENA]
¡û
>W131214639
ATUI01000041
Betaproteobacteria
Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 [ATUI]
1431
1357
-
Val
CAC
[ENA]
¡û
>W131236714
AUMO01000145
Betaproteobacteria
Azohydromonas australica DSM 1124 [AUMO]
5110
5184
+
Val
CAC
[ENA]
¡û
>C013938
CP000555
Betaproteobacteria
Methylibium petroleiphilum PM1 [CP000555]
2416445
2416371
-
Val
CAC
[Ensembl]
¡û
>WENV180016730
FSVW01000542
[FSVW] metagenome; soil
4484
4410
-
Val
CAC
[ENA]
¢þ
>WENV180016752
FSVW01001024
[FSVW] metagenome; soil
2375
2449
+
Val
CAC
[ENA]
¢þ
>WENV180016753
FSVW01001024
[FSVW] metagenome; soil
2470
2544
+
Val
CAC
[ENA]
¢þ
>WENV180018307
FSYV01000481
[FSYV] metagenome; soil
67443
67517
+
Val
CAC
[ENA]
¢þ
>WENV180019610
FTCD01000698
[FTCD] metagenome; soil
37035
36961
-
Val
CAC
[ENA]
¢þ
>WENV180019611
FTCD01000698
[FTCD] metagenome; soil
36923
36849
-
Val
CAC
[ENA]
¢þ
>WENV180028850
FTJH01148496
[FTJH] metagenome; soil
219
145
-
Val
CAC
[ENA]
¢þ
>WENV180028878
FTJH01240855
[FTJH] metagenome; soil
77
151
+
Val
CAC
[ENA]
¢þ
>WENV180033103
FTKD01338579
[FTKD] metagenome; soil
9662
9588
-
Val
CAC
[ENA]
¢þ
>WENV180694492
OCZS012364808
[OCZS] soil metagenome; soil
101
175
+
Val
CAC
[ENA]
¢þ
>WENV181144705
OEHO01067519
[OEHO] metagenome; unknown
138
64
-
Val
CAC
[ENA]
¢þ
>WENV181166711
OEIU01001293
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
5937
5863
-
Val
CAC
[ENA]
¢þ
>WENV181187945
OEOE01004404
[OEOE] activated sludge metagenome; Activated Sludge
211
137
-
Val
CAC
[ENA]
¢þ
>WENV181189318
OEOF01023242
[OEOF] activated sludge metagenome; Activated Sludge
130
204
+
Val
CAC
[ENA]
¢þ
>WENV181227282
OFDN01004964
[OFDN] hot springs metagenome; Water
1915
1989
+
Val
CAC
[ENA]
¢þ
>WENV181372220
OFQW01030996
[OFQW] wastewater metagenome; Exp Tend NO 90WW
569
643
+
Val
CAC
[ENA]
¢þ
>WENV181384082
OFRH01015452
[OFRH] wastewater metagenome; Exp Tend NO 100WW
841
915
+
Val
CAC
[ENA]
¢þ
>WENV181385534
OFRI01113540
[OFRI] wastewater metagenome; Exp Tend VB 90WW
284
358
+
Val
CAC
[ENA]
¢þ
>WENV181400010
OFSF01000731
[OFSF] wastewater metagenome; Exp Tend VB 100WW
3674
3600
-
Val
CAC
[ENA]
¢þ
>WENV181406520
OGCG01000385
[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
22155
22229
+
Val
CAC
[ENA]
¢þ
>WENV181415033
OGCL01003235
[OGCL] hot springs metagenome; Hot spring water
8434
8360
-
Val
CAC
[ENA]
¢þ
>W141207204
AZND01000032
Betaproteobacteria
Methylibium sp. T29 [AZND]
18398
18324
-
Val
CAC
[ENA]
¡û
>W141212860
AZRA01000134
Betaproteobacteria
Sphaerotilus natans subsp. natans DSM 6575 [AZRA]
1541
1467
-
Val
CAC
[ENA]
¡û
>W141214251
AZSN01000063
Betaproteobacteria
Methylibium sp. T29-B [AZSN]
14447
14373
-
Val
CAC
[ENA]
¡û
>W141223628
BADL01000072
Betaproteobacteria
Ideonella sp. B508-1 [BADL]
3393
3467
+
Val
CAC
[ENA]
¡û
>W141223629
BADL01000072
Betaproteobacteria
Ideonella sp. B508-1 [BADL]
3495
3569
+
Val
CAC
[ENA]
¡û
>C08005963
CP001013
Betaproteobacteria
Leptothrix cholodnii SP-6 [CP001013]
1111496
1111425
-
Val
CAC
[Ensembl]
¡û
>WENV183697014
OUNJ010000564
[OUNJ] metagenome; soil
75
1
-
Val
CAC
[ENA]
¢þ
>WENV183725903
PJQF01034193
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
467
393
-
Val
CAC
[ENA]
¢þ
>WENV170011136
APMI01045717
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
296
370
+
Val
CAC
[ENA]
¢þ
>WENV170551574
CXWJ01013067
[CXWJ] wastewater metagenome; activated sludge
814
888
+
Val
CAC
[ENA]
¢þ
>WENV170551884
CXWJ01027888
[CXWJ] wastewater metagenome; activated sludge
1593
1667
+
Val
CAC
[ENA]
¢þ
>WENV170556275
CXWL01006527
[CXWL] groundwater metagenome; biofilm material
28882
28808
-
Val
CAC
[ENA]
¢þ
>WENV170558613
CXWL01081005
[CXWL] groundwater metagenome; biofilm material
7577
7503
-
Val
CAC
[ENA]
¢þ
>WENV170639867
JFJP01010582
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
1407
1481
+
Val
CAC
[ENA]
¢þ
>WENV170651175
JRYF01001836
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
4304
4378
+
Val
CAC
[ENA]
¢þ
>WENV170651179
JRYF01001846
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
1543
1617
+
Val
CAC
[ENA]
¢þ
>WENV170711195
LNFM01003964
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
18242
18168
-
Val
CAC
[ENA]
¢þ
>WENV170711439
LNFM01005232
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
29560
29634
+
Val
CAC
[ENA]
¢þ
>WENV170711756
LNFM01007116
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
6399
6473
+
Val
CAC
[ENA]
¢þ
>WENV170711764
LNFM01007181
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
11726
11800
+
Val
CAC
[ENA]
¢þ
>WENV170714776
LNFM01100603
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
56
130
+
Val
CAC
[ENA]
¢þ
>W09101359
AAEM01000001
Betaproteobacteria
Methylibium petroleiphilum PM1 [AAEM]
425725
425799
+
Val
CAC
[ENA]
¡û
>W09134917
ACVD01000076
Acidithiobacillia
Acidithiobacillus caldus ATCC 51756 [ACVD]
10118
10192
+
Val
CAC
[ENA]
¡û
>C181064552
CP022423
Betaproteobacteria
Vitreoscilla filiformis ATCC 15551 [CP022423]
2699838
2699764
-
Val
CAC
-
¡û
>C181130805
CP026328
Acidithiobacillia
Acidithiobacillus caldus MTH-04 [CP026328]
1217114
1217188
+
Val
CAC
-
¡û
>C181176186
CP029210
Betaproteobacteria
Aquabacterium olei NBRC 110486 [CP029210]
1003461
1003535
+
Val
CAC
-
¡û
>C191005116
AP018795
Acidithiobacillia
Acidithiobacillus ferridurans JCM 18981 [AP018795]
2295349
2295423
+
Val
CAC
-
¡û
>C191064736
CP029606
Betaproteobacteria
Methylibium sp. Pch-M [CP029606]
3416901
3416975
+
Val
CAC
-
¡û
>C191182051
CP040709
Betaproteobacteria
Inhella inkyongensis IMCC1713 [CP040709]
1844581
1844655
+
Val
CAC
-
¡û
>C191182052
CP040709
Betaproteobacteria
Inhella inkyongensis IMCC1713 [CP040709]
1844697
1844771
+
Val
CAC
-
¡û
>W141738857
JNNH01001559
Acidithiobacillia
Acidithiobacillus ferrooxidans ferriphilum [JNNH]
335
261
-
Val
CAC
[ENA]
¡û
>W1910175600
BJCL01000005
Betaproteobacteria
Rubrivivax pictus W35 [BJCL]
129533
129607
+
Val
CAC
[ENA]
¡û
>W1910699727
MERU01000009
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU]
189054
189128
+
Val
CAC
[ENA]
¡û
>W1910699944
MESA01000038
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
64321
64247
-
Val
CAC
[ENA]
¡û
>W1910700049
MESD01000102
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 [MESD]
25499
25425
-
Val
CAC
[ENA]
¡û
>W1910700317
MESK01000023
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
184654
184728
+
Val
CAC
[ENA]
¡û
>W1911766087
QXDH01000003
Betaproteobacteria
Pelomonas sp. BT06 [QXDH]
912149
912223
+
Val
CAC
[ENA]
¡û
>W1911766088
QXDH01000003
Betaproteobacteria
Pelomonas sp. BT06 [QXDH]
912262
912336
+
Val
CAC
[ENA]
¡û
>SRA1001768
SRR001308.44250
Metagenomic characterization of a wastewater treatment plant (SRP000180)
79
5
-
Val
CAC
[SRA]
>SRA1001968
SRR001308.154853
Metagenomic characterization of a wastewater treatment plant (SRP000180)
4
78
+
Val
CAC
[SRA]
>W1810081357
PEOG01000039
Betaproteobacteria
Roseateles chitinivorans HWN-4 [PEOG]
23663
23589
-
Val
CAC
[ENA]
¡û
>W1810081358
PEOG01000039
Betaproteobacteria
Roseateles chitinivorans HWN-4 [PEOG]
23545
23471
-
Val
CAC
[ENA]
¡û
>W1810222852
POSP01000003
Betaproteobacteria
Paucibacter aquatile CR182 [POSP]
668183
668109
-
Val
CAC
[ENA]
¡û
>W1810222853
POSP01000003
Betaproteobacteria
Paucibacter aquatile CR182 [POSP]
668031
667957
-
Val
CAC
[ENA]
¡û
>W1810659017
QJJS01000022
Betaproteobacteria
Sphaerotilus hippei DSM 566 [QJJS]
1248
1174
-
Val
CAC
[ENA]
¡û
>W1810679283
QKQP01000001
Acidithiobacillia
Acidithiobacillus ferrooxidans CCM 4253 [QKQP]
134692
134618
-
Val
CAC
[ENA]
¡û
>W1810884618
QUMT01000001
Betaproteobacteria
Roseateles depolymerans DSM 11813 [QUMT]
1689673
1689747
+
Val
CAC
[ENA]
¡û
>C151007945
CP005986
Acidithiobacillia
Acidithiobacillus caldus ATCC 51756 [CP005986]
1052539
1052613
+
Val
CAC
[Ensembl]
¡û
>C151081693
CP011371
Betaproteobacteria
Caldimonas brevitalea DSM 7029 [CP011371]
3808452
3808378
-
Val
CAC
[Ensembl]
¡û
>W1510021360
BBYR01000039
Betaproteobacteria
Piscinibacter sakaiensis 201-F6 [BBYR]
103079
103005
-
Val
CAC
[ENA]
¡û
>C11100489
CP002573
Acidithiobacillia
Acidithiobacillus caldus SM-1 [CP002573]
1318667
1318741
+
Val
CAC
[Ensembl]
¡û
>W1511348525
JRKM01000001
Betaproteobacteria
Aquabacterium sp. NJ1 [JRKM]
1269635
1269561
-
Val
CAC
[ENA]
¡û
>W1511552116
JZUE01000018
Betaproteobacteria
Aquincola tertiaricarbonis MIMtkpLc11 [JZUE]
52542
52468
-
Val
CAC
[ENA]
¡û
>W11150918
AEWG01000055
Betaproteobacteria
Rubrivivax benzoatilyticus JA2 [AEWG]
29381
29455
+
Val
CAC
[ENA]
¡û
>C121001098
AP012320
Betaproteobacteria
Rubrivivax gelatinosus IL144 [AP012320]
1953008
1953082
+
Val
CAC
[Ensembl]
¡û
>C161036427
CP011514
Betaproteobacteria
Mitsuaria sp. 7 [CP011514]
614270
614344
+
Val
CAC
-
¡û
>C161036428
CP011514
Betaproteobacteria
Mitsuaria sp. 7 [CP011514]
614408
614482
+
Val
CAC
-
¡û
>C161059534
CP013692
Betaproteobacteria
Paucibacter sp. KCTC 42545 [CP013692]
1461553
1461627
+
Val
CAC
[Ensembl]
¡û
>C161060312
CP013729
Betaproteobacteria
Roseateles depolymerans KCTC 42856 [CP013729]
3478510
3478436
-
Val
CAC
[Ensembl]
¡û
>W121036360
AHLZ01000002
Betaproteobacteria
Burkholderiales bacterium JOSHI_001 [AHLZ]
2468224
2468150
-
Val
CAC
[ENA]
¡û
>W121060080
AJFF01000024
Betaproteobacteria
Rubrivivax gelatinosus CBS [AJFF]
7286
7212
-
Val
CAC
[ENA]
¡û
>W1610070224
BCTC01000004
Betaproteobacteria
Azohydromonas lata NBRC 102462 [BCTC]
136643
136717
+
Val
CAC
[ENA]
¡û
>W1610076239
BCYP01000006
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
342991
343065
+
Val
CAC
[ENA]
¡û
>W1610076240
BCYP01000006
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
343103
343177
+
Val
CAC
[ENA]
¡û
>W1610604877
LFRI01000100
Betaproteobacteria
Aquabacterium parvum [LFRI]
106113
106187
+
Val
CAC
[ENA]
¡û
>W1610627883
LIEB01000002
Nitrospirota
Leptospirillum sp. YQP-1 [LIEB]
76032
75958
-
Val
CAC
[ENA]
¡û
>W1610641821
LJBT01000010
Acidithiobacillia
Acidithiobacillus ferrooxidans [LJBT]
76058
75984
-
Val
CAC
[ENA]
¡û
>W1610649146
LJHT01000102
Betaproteobacteria
beta proteobacterium AAP51 [LJHT]
29077
29151
+
Val
CAC
[ENA]
¡û
>W1610724189
LMDY01000001
Betaproteobacteria
Methylibium sp. Root1272 [LMDY]
16341
16415
+
Val
CAC
[ENA]
¡û
>W1610859017
LQRJ01000071
Acidithiobacillia
Acidithiobacillus ferrooxidans [LQRJ]
75991
75917
-
Val
CAC
[ENA]
¡û
>W1611004682
LXQG01000109
Acidithiobacillia
Acidithiobacillus caldus [LXQG]
9874
9948
+
Val
CAC
[ENA]
¡û
>W1710067597
BCTC01000004
Betaproteobacteria
Azohydromonas lata NBRC 102462 [BCTC]
136643
136717
+
Val
CAC
[ENA]
¡û
>W1710074054
BCYP01000006
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
342991
343065
+
Val
CAC
[ENA]
¡û
>W1710074055
BCYP01000006
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
343103
343177
+
Val
CAC
[ENA]
¡û
>W1710575428
FOZE01000001
Betaproteobacteria
Mitsuaria sp. PDC51 [FOZE]
1315590
1315664
+
Val
CAC
[ENA]
¡û
>W1710575429
FOZE01000001
Betaproteobacteria
Mitsuaria sp. PDC51 [FOZE]
1315719
1315793
+
Val
CAC
[ENA]
¡û
>W1710597159
FTMZ01000038
Betaproteobacteria
Sphaerotilus natans [FTMZ]
1850
1776
-
Val
CAC
[ENA]
¡û
>W1710726320
LFRI01000100
Betaproteobacteria
Aquabacterium parvum [LFRI]
106113
106187
+
Val
CAC
[ENA]
¡û
>W1710759010
LIEB01000002
Nitrospirota
Leptospirillum sp. YQP-1 [LIEB]
76032
75958
-
Val
CAC
[ENA]
¡û
Identical group No.685917 (5 seq.)
>SRA1001778
SRR001308.49435
Metagenomic characterization of a wastewater treatment plant (SRP000180)
96
22
-
Val
CAC
[SRA]
>SRA1001790
SRR001308.55997
Metagenomic characterization of a wastewater treatment plant (SRP000180)
96
22
-
Val
CAC
[SRA]
>SRA1001799
SRR001308.60392
Metagenomic characterization of a wastewater treatment plant (SRP000180)
96
22
-
Val
CAC
[SRA]
>SRA1002118
SRR001308.254276
Metagenomic characterization of a wastewater treatment plant (SRP000180)
96
22
-
Val
CAC
[SRA]
>SRA1002171
SRR001308.283774
Metagenomic characterization of a wastewater treatment plant (SRP000180)
14
88
+
Val
CAC
[SRA]
Identical group No.685924 (26 seq.)
>W1711394889
MESN01000196
Betaproteobacteria
Burkholderiales bacterium RIFOXYC12_FULL_60_6 [MESN]
2023
2097
+
Val
CAC
[ENA]
¡û
>W1711394999
MESQ01000028
Betaproteobacteria
Burkholderiales bacterium RIFOXYD12_FULL_59_19 [MESQ]
565
491
-
Val
CAC
[ENA]
¡û
>W1711395049
MESR01000468
Betaproteobacteria
Burkholderiales bacterium RIFOXYD2_FULL_59_8 [MESR]
4604
4530
-
Val
CAC
[ENA]
¡û
>WENV180268136
OBEQ011933370
[OBEQ] groundwater metagenome; groundwater
3946
3872
-
Val
CAC
[ENA]
¢þ
>WENV180271190
OBEQ012245000
[OBEQ] groundwater metagenome; groundwater
654
580
-
Val
CAC
[ENA]
¢þ
>WENV181367536
OFQB01008591
[OFQB] freshwater metagenome; Freshwater Lake
184
110
-
Val
CAC
[ENA]
¢þ
>WENV181368444
OFQL01005234
[OFQL] freshwater metagenome; Freshwater Lake
869
943
+
Val
CAC
[ENA]
¢þ
>WENV181369698
OFQP01023611
[OFQP] freshwater metagenome; Freshwater Lake
235
309
+
Val
CAC
[ENA]
¢þ
>WENV181370473
OFQS01018652
[OFQS] freshwater metagenome; Freshwater Lake
214
140
-
Val
CAC
[ENA]
¢þ
>WENV181370697
OFQT01004074
[OFQT] freshwater metagenome; Freshwater Lake
641
567
-
Val
CAC
[ENA]
¢þ
>WENV170706994
LNAP01010562
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2929
3003
+
Val
CAC
[ENA]
¢þ
>W1910700226
MESI01000018
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 [MESI]
29991
29917
-
Val
CAC
[ENA]
¡û
>W1910888429
NERU01000002
Betaproteobacteria
Limnohabitans sp. WS1 [NERU]
345001
345075
+
Val
CAC
[ENA]
¡û
>W1910888529
NERW01000002
Betaproteobacteria
Limnohabitans sp. T6-20 [NERW]
458802
458876
+
Val
CAC
[ENA]
¡û
>W1910888695
NESA01000003
Betaproteobacteria
Limnohabitans sp. JirII-31 [NESA]
135063
134989
-
Val
CAC
[ENA]
¡û
>W1910888722
NESB01000001
Betaproteobacteria
Limnohabitans sp. JirII-29 [NESB]
363729
363803
+
Val
CAC
[ENA]
¡û
>W1910888849
NESE01000001
Betaproteobacteria
Limnohabitans sp. Hippo4 [NESE]
310393
310319
-
Val
CAC
[ENA]
¡û
>W1910888905
NESF01000007
Betaproteobacteria
Limnohabitans sp. Hippo3 [NESF]
101974
102048
+
Val
CAC
[ENA]
¡û
>W1910889132
NESL01000002
Betaproteobacteria
Limnohabitans sp. 2KL-1 [NESL]
585461
585387
-
Val
CAC
[ENA]
¡û
>W1910889221
NESN01000001
Betaproteobacteria
Limnohabitans parvus II-B4 [NESN]
455859
455785
-
Val
CAC
[ENA]
¡û
>SRA1001831
SRR001308.77886
Metagenomic characterization of a wastewater treatment plant (SRP000180)
82
156
+
Val
CAC
[SRA]
>WENV037483
AACY021860696
Marine microbial communities from Global Ocean Sampling (GOS)
260
186
-
Val
CAC
[ENA]
>W1510720067
CXOM01000003
Betaproteobacteria
Limnohabitans sp. Rim11 [CXOM]
415884
415958
+
Val
CAC
[ENA]
¡û
>W1510720097
CXON01000003
Betaproteobacteria
Limnohabitans sp. 2KL-3 [CXON]
43548
43474
-
Val
CAC
[ENA]
¡û
>W1510720189
CXOP01000002
Betaproteobacteria
Limnohabitans sp. 2KL-27 [CXOP]
2155720
2155646
-
Val
CAC
[ENA]
¡û
>C161037569
CP011834
Betaproteobacteria
Limnohabitans sp. 103DPR2 [CP011834]
1632606
1632680
+
Val
CAC
[Ensembl]
¡û
Identical group No.685948 (1 seq.)
>SRA1002185
SRR001308.293916
Metagenomic characterization of a wastewater treatment plant (SRP000180)
96
22
-
Val
CAC
[SRA]
Identical group No.685957 (1 seq.)
>SRA1002267
SRR001308.335392
Metagenomic characterization of a wastewater treatment plant (SRP000180)
45
119
+
Val
CAC
[SRA]
Identical group No.685958 (1 seq.)
>SRA1002275
SRR001308.343264
Metagenomic characterization of a wastewater treatment plant (SRP000180)
116
189
+
Val
CAC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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