tRNA genes clustered and arranged according to each identical group

Metagenomic characterization of a wastewater treatment plant (SRP000180)

Anticodon = CCT

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.288820 (7 seq.)
>W131221544 AUAO01000001 Alphaproteobacteria Brevundimonas aveniformis DSM 17977 [AUAO] 890614 890690 + Arg CCT [ENA] ¡û
>WENV181169670 OEIV010006629 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 1580 1656 + Arg CCT [ENA] ¢þ
>WENV181170423 OEIV010045638 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 411 487 + Arg CCT [ENA] ¢þ
>WENV181371478 OFQV01008598 [OFQV] wastewater metagenome; WWTP Cannobio (Effluent) 864 788 - Arg CCT [ENA] ¢þ
>WENV181378884 OFRC01002367 [OFRC] wastewater metagenome; Exp Tend CN 10WW 1976 1900 - Arg CCT [ENA] ¢þ
>WENV181381679 OFRF01001903 [OFRF] wastewater metagenome; Exp Tend CN 50WW 2092 2168 + Arg CCT [ENA] ¢þ
>SRA1001737 SRR001308.22142 Metagenomic characterization of a wastewater treatment plant (SRP000180) 82 6 - Arg CCT [SRA]
Identical group No.302851 (24 seq.)
>W1711501627 MKRV01000143 Alphaproteobacteria Alphaproteobacteria bacterium 65-37 [MKRV] 22726 22802 + Arg CCT [ENA] ¡û
>WENV180020084 FTCV01001614 [FTCV] metagenome; soil 1717 1793 + Arg CCT [ENA] ¢þ
>WENV180247509 OBEQ010035401 [OBEQ] groundwater metagenome; groundwater 3 79 + Arg CCT [ENA] ¢þ
>WENV180284502 OBID01049657 [OBID] metagenome; sludge 933 857 - Arg CCT [ENA] ¢þ
>WENV180372292 OBOI01053278 [OBOI] sediment metagenome; sediment 58 134 + Arg CCT [ENA] ¢þ
>WENV181172976 OEIV011113722 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 200 124 - Arg CCT [ENA] ¢þ
>WENV183663318 ORJL010273004 [ORJL] groundwater metagenome; groundwater 32975 33051 + Arg CCT [ENA] ¢þ
>WENV183669802 ORJL010879018 [ORJL] groundwater metagenome; groundwater 8 84 + Arg CCT [ENA] ¢þ
>WENV183673987 ORJL011336946 [ORJL] groundwater metagenome; groundwater 502 578 + Arg CCT [ENA] ¢þ
>WENV183674634 ORJL011412960 [ORJL] groundwater metagenome; groundwater 1134 1058 - Arg CCT [ENA] ¢þ
>WENV183691780 ORMF011817503 [ORMF] groundwater metagenome; groundwater 128 52 - Arg CCT [ENA] ¢þ
>WENV170004580 AGTN01727738 [AGTN] bioreactor metagenome; poplar biomass 232 308 + Arg CCT [ENA] ¢þ
>WENV170379049 CETV01083946 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 399 + Arg CCT [ENA] ¢þ
>WENV170558041 CXWL01047172 [CXWL] groundwater metagenome; biofilm material 158 234 + Arg CCT [ENA] ¢þ
>WENV170709706 LNFM01000606 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 94573 94497 - Arg CCT [ENA] ¢þ
>WENV170710260 LNFM01001404 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 12571 12495 - Arg CCT [ENA] ¢þ
>WENV170710340 LNFM01001557 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 9794 9870 + Arg CCT [ENA] ¢þ
>WENV170710871 LNFM01002884 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 65087 65011 - Arg CCT [ENA] ¢þ
>WENV170711573 LNFM01005896 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 803 879 + Arg CCT [ENA] ¢þ
>WENV170712591 LNFM01015274 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 8452 8376 - Arg CCT [ENA] ¢þ
>WENV170712854 LNFM01018864 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 252 176 - Arg CCT [ENA] ¢þ
>W1910698363 MEMN01000173 Alphaproteobacteria Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 [MEMN] 314 238 - Arg CCT [ENA] ¡û
>SRA1001769 SRR001308.44453 Metagenomic characterization of a wastewater treatment plant (SRP000180) 276 200 - Arg CCT [SRA]
>W1710600372 FUWJ01000008 Alphaproteobacteria Enhydrobacter aerosaccus [FUWJ] 106528 106604 + Arg CCT [ENA] ¡û
Identical group No.320997 (1 seq.)
>SRA1001733 SRR001308.21660 Metagenomic characterization of a wastewater treatment plant (SRP000180) 161 235 + Arg CCT [SRA]
Identical group No.321025 (1 seq.)
>SRA1002004 SRR001308.179174 Metagenomic characterization of a wastewater treatment plant (SRP000180) 63 137 + Arg CCT [SRA]
Identical group No.321026 (1 seq.)
>SRA1002006 SRR001308.180719 Metagenomic characterization of a wastewater treatment plant (SRP000180) 218 143 - Arg CCT [SRA]
Identical group No.321061 (1 seq.)
>SRA1002321 SRR001308.374104 Metagenomic characterization of a wastewater treatment plant (SRP000180) 86 13 - Arg CCT [SRA]
Identical group No.506817 (3 seq.)
>SRA1001743 SRR001308.24866 Metagenomic characterization of a wastewater treatment plant (SRP000180) 100 175 + Arg CCT [SRA]
>SRA1001895 SRR001308.114034 Metagenomic characterization of a wastewater treatment plant (SRP000180) 251 176 - Arg CCT [SRA]
>SRA1002027 SRR001308.193324 Metagenomic characterization of a wastewater treatment plant (SRP000180) 100 175 + Arg CCT [SRA]
Identical group No.685918 (4 seq.)
>W1710894168 LNFQ01000013 Bacteroidota Bacteroidetes bacterium OLB11 [LNFQ] 55263 55337 + Arg CCT [ENA] ¡û
>WENV181169118 OEIV010000310 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 463 391 - Arg CCT [ENA] ¢þ
>SRA1001794 SRR001308.58397 Metagenomic characterization of a wastewater treatment plant (SRP000180) 95 21 - Arg CCT [SRA]
>W1610754434 LNFQ01000013 Bacteroidota Bacteroidetes bacterium OLB11 [LNFQ] 55263 55337 + Arg CCT [ENA] ¡û
Identical group No.685943 (1 seq.)
>SRA1002122 SRR001308.257175 Metagenomic characterization of a wastewater treatment plant (SRP000180) 172 246 + Arg CCT [SRA]
Identical group No.685946 (1 seq.)
>SRA1002163 SRR001308.278592 Metagenomic characterization of a wastewater treatment plant (SRP000180) 164 90 - Arg CCT [SRA]
Identical group No.685950 (1 seq.)
>SRA1002216 SRR001308.308319 Metagenomic characterization of a wastewater treatment plant (SRP000180) 137 211 + Arg CCT [SRA]
Identical group No.685951 (1 seq.)
>SRA1002229 SRR001308.318181 Metagenomic characterization of a wastewater treatment plant (SRP000180) 41 113 + Arg CCT [SRA]
Identical group No.685954 (1 seq.)
>SRA1002254 SRR001308.330015 Metagenomic characterization of a wastewater treatment plant (SRP000180) 215 141 - Arg CCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK