tRNA genes clustered and arranged according to each identical group

Metagenomic characterization of a wastewater treatment plant (SRP000180)

Anticodon = CGA

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.22540 (1 seq.)
>SRA1002191 SRR001308.296695 Metagenomic characterization of a wastewater treatment plant (SRP000180) 155 246 + Ser CGA [SRA]
Identical group No.34514 (1 seq.)
>SRA1001873 SRR001308.104077 Metagenomic characterization of a wastewater treatment plant (SRP000180) 256 166 - Ser CGA [SRA]
Identical group No.34516 (1 seq.)
>SRA1002124 SRR001308.257993 Metagenomic characterization of a wastewater treatment plant (SRP000180) 61 151 + Ser CGA [SRA]
Identical group No.52717 (1 seq.)
>SRA1001789 SRR001308.53743 Metagenomic characterization of a wastewater treatment plant (SRP000180) 47 134 + Ser CGA [SRA]
Identical group No.76312 (2 seq.)
>SRA1002094 SRR001308.236394 Metagenomic characterization of a wastewater treatment plant (SRP000180) 8 96 + Ser CGA [SRA]
>SRA1002329 SRR001308.377594 Metagenomic characterization of a wastewater treatment plant (SRP000180) 8 96 + Ser CGA [SRA]
Identical group No.91965 (12 seq.)
>W1711385786 MEEP01000157 Nitrospirota Nitrospira sp. SCN 59-13 [MEEP] 5499 5586 + Ser CGA [ENA] ¡û
>WENV180283465 OBID01000166 [OBID] metagenome; sludge 5955 5868 - Ser CGA [ENA] ¢þ
>WENV181172013 OEIV010445097 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 119 32 - Ser CGA [ENA] ¢þ
>WENV181188684 OEOE01273166 [OEOE] activated sludge metagenome; Activated Sludge 152 65 - Ser CGA [ENA] ¢þ
>WENV181189649 OEOF01132298 [OEOF] activated sludge metagenome; Activated Sludge 28 115 + Ser CGA [ENA] ¢þ
>WENV181192700 OEPS010942234 [OEPS] soil metagenome; soil 44 131 + Ser CGA [ENA] ¢þ
>WENV170551312 CXWJ01003861 [CXWJ] wastewater metagenome; activated sludge 3912 3825 - Ser CGA [ENA] ¢þ
>WENV170553045 CXWK01006189 [CXWK] wastewater metagenome; activated sludge 27650 27737 + Ser CGA [ENA] ¢þ
>WENV170974940 MTKY01081545 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 3909 3996 + Ser CGA [ENA] ¢þ
>W1910441958 FWEX01000006 Nitrospirota Nitrospira sp. ND1 [FWEX] 205833 205920 + Ser CGA [ENA] ¡û
>SRA1001951 SRR001308.145059 Metagenomic characterization of a wastewater treatment plant (SRP000180) 178 265 + Ser CGA [SRA]
>C10109751 FP929003 Nitrospirota Nitrospira defluvii [FP929003] 1645265 1645178 - Ser CGA [Ensembl] ¡û
Identical group No.93349 (1 seq.)
>SRA1002281 SRR001308.345538 Metagenomic characterization of a wastewater treatment plant (SRP000180) 38 125 + Ser CGA [SRA]
Identical group No.123059 (1 seq.)
>SRA1002184 SRR001308.292521 Metagenomic characterization of a wastewater treatment plant (SRP000180) 105 190 + Ser CGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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