tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CCA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.167872 (3 seq.)
>W1711408518 MGMS01000054 Chloroflexota Chloroflexi bacterium RBG_13_51_36 [MGMS] 41947 42024 + Trp CCA [ENA] ¡û
>SRA1002451 SRR001324.13158 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 84 + Trp CCA [SRA]
>SRA1002452 SRR001324.16150 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 84 + Trp CCA [SRA]
Identical group No.192424 (8 seq.)
>WENV183678883 ORJL011934924 [ORJL] groundwater metagenome; groundwater 766 842 + Trp CCA [ENA] ¢þ
>WENV183694186 ORMF012197438 [ORMF] groundwater metagenome; groundwater 12930 12854 - Trp CCA [ENA] ¢þ
>WENV170017717 BARU01017693 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 736 662 - Trp CCA [ENA] ¢þ
>WENV170018248 BARV01030496 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 95 21 - Trp CCA [ENA] ¢þ
>WENV170018319 BARW01000663 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 1417 1341 - Trp CCA [ENA] ¢þ
>WENV170018396 BARW01008280 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 451 375 - Trp CCA [ENA] ¢þ
>SRA1002417 SRR001323.88395 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 106 30 - Trp CCA [SRA]
>SRA1019658 SRR035082.496470 454 Sequencing (SRP001803) 177 253 + Trp CCA [SRA]
Identical group No.237814 (1 seq.)
>SRA1002517 SRR001325.75754 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 97 21 - Trp CCA [SRA]
Identical group No.237815 (1 seq.)
>SRA1002521 SRR001325.86047 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 30 106 + Trp CCA [SRA]
Identical group No.260687 (4 seq.)
>W1710798776 LJTX01000143 Chloroflexota Dehalococcoidia bacterium SG8_51_3 [LJTX] 1139 1063 - Trp CCA [ENA] ¡û
>WENV170647893 JRER01000971 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2594 2520 - Trp CCA [ENA] ¢þ
>SRA1002337 SRR001322.18021 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 89 13 - Trp CCA [SRA]
>W1610662733 LJTX01000143 Chloroflexota Dehalococcoidia bacterium SG8_51_3 [LJTX] 1139 1063 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK