tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CCG

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242926 (1 seq.)
>SRA1002482 SRR001324.72837 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 90 15 - Arg CCG [SRA]
Identical group No.313892 (19 seq.)
>W1711408816 MGNJ01000038 Chloroflexota Chloroflexi bacterium RBG_16_50_11 [MGNJ] 6141 6213 + Arg CCG [ENA] ¡û
>W1711409025 MGNQ01000025 Chloroflexota Chloroflexi bacterium RBG_16_56_11 [MGNQ] 16134 16060 - Arg CCG [ENA] ¡û
>WENV180072246 MPMA02009810 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 556 629 + Arg CCG [ENA] ¢þ
>WENV183795281 PVBE010159776 [PVBE] marine metagenome; water 1347 1420 + Arg CCG [ENA] ¢þ
>WENV183804809 PVBE010960783 [PVBE] marine metagenome; water 375 447 + Arg CCG [ENA] ¢þ
>WENV170016950 BARS01031949 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 230 303 + Arg CCG [ENA] ¢þ
>WENV170017841 BARU01031622 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 137 210 + Arg CCG [ENA] ¢þ
>WENV170018365 BARW01006186 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 1477 1404 - Arg CCG [ENA] ¢þ
>WENV170209714 CEPV01081833 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 420 345 - Arg CCG [ENA] ¢þ
>WENV170224749 CEQE01078625 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 613 541 - Arg CCG [ENA] ¢þ
>WENV170647945 JRER01001593 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 11679 11606 - Arg CCG [ENA] ¢þ
>WENV170889537 MDTC01276366 [MDTC] marine metagenome; seawater 135 62 - Arg CCG [ENA] ¢þ
>SRA1002331 SRR001322.4871 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 81 + Arg CCG [SRA]
>SRA1002334 SRR001322.12730 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 81 + Arg CCG [SRA]
>SRA1002336 SRR001322.16289 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 81 + Arg CCG [SRA]
>SRA1002338 SRR001322.19388 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 93 + Arg CCG [SRA]
>SRA1002344 SRR001322.38796 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 7 81 + Arg CCG [SRA]
>SRA1013684 SRR023396.385457 Brazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095) 55 128 + Arg CCG [SRA]
>W1730028073 MGNA01000074 Chloroflexota Chloroflexi bacterium RBG_13_56_8b [MGNA] 2603 2530 - Arg CCG [ENA] ¡û
Identical group No.426905 (3 seq.)
>WENV183800638 PVBE010604064 [PVBE] marine metagenome; water 1018 944 - Arg CCG [ENA] ¢þ
>SRA1002495 SRR001325.12118 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 85 11 - Arg CCG [SRA]
>SRA1002509 SRR001325.57985 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 85 11 - Arg CCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK