tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.232127 (3 seq.)
>SRA1002492 SRR001325.158 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 82 9 - Ala CGC [SRA]
>SRA1002512 SRR001325.68866 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 13 86 + Ala CGC [SRA]
>W1610919948 LSSB01000111 Euryarchaeota Theionarchaea archaeon DG-70 DG-70 [LSSB] 13493 13419 - Ala CGC [ENA] ¡û
Identical group No.282358 (30 seq.)
>W1711408639 MGNA01000008 Chloroflexota Chloroflexi bacterium RBG_13_56_8b [MGNA] 4130 4055 - Ala CGC [ENA] ¡û
>WENV180073485 MPMA02084077 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 322 247 - Ala CGC [ENA] ¢þ
>WENV181412420 OGCK01000187 [OGCK] hot springs metagenome; hot spring sediment 6717 6642 - Ala CGC [ENA] ¢þ
>WENV183660702 ORJL010046826 [ORJL] groundwater metagenome; groundwater 1490 1565 + Ala CGC [ENA] ¢þ
>WENV183661988 ORJL010155208 [ORJL] groundwater metagenome; groundwater 59 134 + Ala CGC [ENA] ¢þ
>WENV183669252 ORJL010822226 [ORJL] groundwater metagenome; groundwater 8567 8492 - Ala CGC [ENA] ¢þ
>WENV183670962 ORJL011008353 [ORJL] groundwater metagenome; groundwater 9424 9499 + Ala CGC [ENA] ¢þ
>WENV183672733 ORJL011203797 [ORJL] groundwater metagenome; groundwater 260 334 + Ala CGC [ENA] ¢þ
>WENV183676137 ORJL011590662 [ORJL] groundwater metagenome; groundwater 1309 1234 - Ala CGC [ENA] ¢þ
>WENV183678739 ORJL011916548 [ORJL] groundwater metagenome; groundwater 7657 7732 + Ala CGC [ENA] ¢þ
>WENV183796474 PVBE010252655 [PVBE] marine metagenome; water 74 1 - Ala CGC [ENA] ¢þ
>WENV183801291 PVBE010663724 [PVBE] marine metagenome; water 412 487 + Ala CGC [ENA] ¢þ
>WENV183804498 PVBE010934305 [PVBE] marine metagenome; water 78 3 - Ala CGC [ENA] ¢þ
>WENV170017797 BARU01026710 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 56 131 + Ala CGC [ENA] ¢þ
>WENV170017973 BARV01002052 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 952 1027 + Ala CGC [ENA] ¢þ
>WENV170018394 BARW01008280 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 651 576 - Ala CGC [ENA] ¢þ
>WENV170204280 CEPS01180193 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1056 981 - Ala CGC [ENA] ¢þ
>WENV170209848 CEPV01089314 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2097 2170 + Ala CGC [ENA] ¢þ
>WENV170210469 CEPV01208689 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1841 1766 - Ala CGC [ENA] ¢þ
>WENV170215730 CEPX01173460 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 373 448 + Ala CGC [ENA] ¢þ
>WENV170223973 CEQE01019083 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 544 471 - Ala CGC [ENA] ¢þ
>WENV170224972 CEQE01101508 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 258 183 - Ala CGC [ENA] ¢þ
>WENV170396645 CEUC01326775 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 812 887 + Ala CGC [ENA] ¢þ
>WENV170397058 CEUD01020330 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 151 76 - Ala CGC [ENA] ¢þ
>WENV170397590 CEUD01074956 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 249 174 - Ala CGC [ENA] ¢þ
>WENV170647822 JREQ01006235 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 1334 1259 - Ala CGC [ENA] ¢þ
>WENV170875793 MDTC01028733 [MDTC] marine metagenome; seawater 2735 2810 + Ala CGC [ENA] ¢þ
>SRA1002516 SRR001325.75719 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 12 87 + Ala CGC [SRA]
>SRA1035343 SRR035089.287186 454 Sequencing (SRP001810) 338 263 - Ala CGC [SRA]
>SRA1036079 SRR035089.439471 454 Sequencing (SRP001810) 124 197 + Ala CGC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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