tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CTG

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.480473 (2 seq.)
>WENV170647716 JREQ01003039 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 343 418 + Gln CTG [ENA]
>SRA1002370 SRR001322.100566 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 9 84 + Gln CTG [SRA]
Identical group No.786804 (11 seq.)
>W141066476 ARPL01000003 Chloroflexi Dehalococcoidia bacterium SCGC AB-539-J10 [ARPL] 42855 42928 + Gln CTG [ENA]
>WENV170016725 BARS01004345 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 772 845 + Gln CTG [ENA]
>WENV170017818 BARU01029496 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 299 226 - Gln CTG [ENA]
>WENV170647804 JREQ01005374 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 14413 14340 - Gln CTG [ENA]
>WENV170647828 JRER01000030 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 7164 7237 + Gln CTG [ENA]
>WENV170647873 JRER01000709 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2628 2701 + Gln CTG [ENA]
>WENV170648133 JRER01005480 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 1303 1230 - Gln CTG [ENA]
>WENV170648138 JRER01005588 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 253 326 + Gln CTG [ENA]
>SRA1002501 SRR001325.18041 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 96 23 - Gln CTG [SRA]
>SRA1002503 SRR001325.19054 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 96 23 - Gln CTG [SRA]
>SRA1002519 SRR001325.76976 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 29 102 + Gln CTG [SRA]
Identical group No.809448 (2 seq.)
>SRA1002439 SRR001323.146993 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 10 83 + Gln CTG [SRA]
>SRA1002498 SRR001325.15266 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 117 44 - Gln CTG [SRA]
Identical group No.809449 (1 seq.)
>SRA1002508 SRR001325.48416 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 33 105 + Gln CTG [SRA]
Identical group No.812643 (1 seq.)
>SRA1002468 SRR001324.43953 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 92 19 - Gln CTG [SRA]
Identical group No.828353 (1 seq.)
>SRA1002349 SRR001322.52766 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 38 111 + Gln CTG [SRA]
Identical group No.833465 (2 seq.)
>SRA1002396 SRR001323.47395 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 108 35 - Gln CTG [SRA]
>SRA1002400 SRR001323.53330 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 13 86 + Gln CTG [SRA]
Identical group No.833466 (1 seq.)
>SRA1002397 SRR001323.48082 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 3 76 + Gln CTG [SRA]
Identical group No.833467 (1 seq.)
>SRA1002412 SRR001323.74613 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 75 1 - Gln CTG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK