tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = GGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.453564 (29 seq.)
>W131162447 AQYX01000032 Atribacterota Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX] 1173 1248 + Ala GGC [ENA] ¡û
>W131193763 ASPA01000029 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 3945 4020 + Ala GGC [ENA] ¡û
>W131193791 ASPB01000061 Atribacterota Atribacteria bacterium SCGC AB-164-D21 OP9 bacterium SCGC AB-164-D21 [ASPB] 786 711 - Ala GGC [ENA] ¡û
>WENV181412754 OGCK01006644 [OGCK] hot springs metagenome; hot spring sediment 1157 1082 - Ala GGC [ENA] ¢þ
>WENV183514225 OMKS01013950 [OMKS] sediment metagenome; hot spring sediment 4400 4325 - Ala GGC [ENA] ¢þ
>WENV170016650 BARS01000057 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 1573 1648 + Ala GGC [ENA] ¢þ
>WENV170016660 BARS01000428 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 236 311 + Ala GGC [ENA] ¢þ
>WENV170017006 BARS01039742 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 264 339 + Ala GGC [ENA] ¢þ
>WENV170017202 BART01001051 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 1787 1862 + Ala GGC [ENA] ¢þ
>WENV170017253 BART01004757 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 169 244 + Ala GGC [ENA] ¢þ
>WENV170017882 BARU01036801 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 543 468 - Ala GGC [ENA] ¢þ
>WENV170018057 BARV01007606 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 1001 926 - Ala GGC [ENA] ¢þ
>WENV170018336 BARW01002372 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 208 283 + Ala GGC [ENA] ¢þ
>WENV170018445 BARW01018342 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 131 206 + Ala GGC [ENA] ¢þ
>WENV170620543 FUWD013033533 [FUWD] metagenome; unknown 835 910 + Ala GGC [ENA] ¢þ
>WENV170628686 FUWD013250959 [FUWD] metagenome; unknown 835 910 + Ala GGC [ENA] ¢þ
>WENV170678053 LDZT01010705 [LDZT] terrestrial metagenome; oil reservoir sample SB1 20540 20465 - Ala GGC [ENA] ¢þ
>WENV170679161 LDZU01008750 [LDZU] terrestrial metagenome; oil reservoir sample SB2 20706 20631 - Ala GGC [ENA] ¢þ
>WENV170693716 LGVC01049714 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 331 256 - Ala GGC [ENA] ¢þ
>WENV170694225 LGVD01022749 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 4676 4751 + Ala GGC [ENA] ¢þ
>W1910870320 NCRO01000111 Atribacterota Candidatus Atribacteria bacterium RS-JS1 [NCRO] 11881 11806 - Ala GGC [ENA] ¡û
>SRA1002456 SRR001324.23970 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 94 19 - Ala GGC [SRA]
>SRA1002467 SRR001324.42611 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 94 19 - Ala GGC [SRA]
>SRA1002491 SRR001324.104445 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 94 19 - Ala GGC [SRA]
>SRA1017652 SRR035082.175639 454 Sequencing (SRP001803) 377 452 + Ala GGC [SRA]
>SRA1030431 SRR035087.278771 454 Sequencing (SRP001808) 183 258 + Ala GGC [SRA]
>SRA1034675 SRR035089.148704 454 Sequencing (SRP001810) 284 209 - Ala GGC [SRA]
>SRA1035123 SRR035089.241798 454 Sequencing (SRP001810) 320 245 - Ala GGC [SRA]
>W1510076775 CDPL01000047 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 1798 1873 + Ala GGC [ENA] ¡û
Identical group No.525508 (3 seq.)
>WENV170017886 BARU01038183 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 11 86 + Ala GGC [ENA] ¢þ
>WENV170018492 BARW01027559 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 617 542 - Ala GGC [ENA] ¢þ
>SRA1002552 SRR001326.72651 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 126 52 - Ala GGC [SRA]
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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