tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = GTC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.243999 (7 seq.)
>WENV180013062 FMSI01042102 [FMSI] soil metagenome; Soil 78 1 - Asp GTC [ENA]
>WENV180036900 FVAA010436108 [FVAA] soil metagenome; Soil 3339 3262 - Asp GTC [ENA]
>WENV170647668 JREQ01001778 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 493 416 - Asp GTC [ENA]
>WENV170647717 JREQ01003052 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 5193 5116 - Asp GTC [ENA]
>WENV170647745 JREQ01003803 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 1166 1089 - Asp GTC [ENA]
>WENV170647811 JREQ01005761 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 417 340 - Asp GTC [ENA]
>SRA1002356 SRR001322.65658 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 21 96 + Asp GTC [SRA]
Identical group No.257972 (1 seq.)
>SRA1002463 SRR001324.38206 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 83 6 - Asp GTC [SRA]
Identical group No.266332 (1 seq.)
>SRA1002332 SRR001322.9121 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 35 111 + Asp GTC [SRA]
Identical group No.337560 (1 seq.)
>SRA1002543 SRR001326.31376 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 3 77 + Asp GTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK