tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = GTC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.158109 (6 seq.)
>W1711584148 MNYD01000158 Chloroflexota Dehalococcoidia bacterium CG2_30_46_19 [MNYD] 2843 2918 + Asp GTC [ENA] ¡û
>W141066490 ARPL01000047 Chloroflexota Dehalococcoidia bacterium SCGC AB-539-J10 [ARPL] 3663 3586 - Asp GTC [ENA] ¡û
>WENV170018187 BARV01023473 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 13 88 + Asp GTC [ENA] ¢þ
>WENV170648030 JRER01002881 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 9 84 + Asp GTC [ENA] ¢þ
>WENV170648103 JRER01004787 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 1922 1847 - Asp GTC [ENA] ¢þ
>SRA1002463 SRR001324.38206 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 83 6 - Asp GTC [SRA]
Identical group No.158367 (9 seq.)
>WENV180013062 FMSI01042102 [FMSI] soil metagenome; Soil 78 1 - Asp GTC [ENA] ¢þ
>WENV180036900 FVAA010436108 [FVAA] soil metagenome; Soil 3339 3262 - Asp GTC [ENA] ¢þ
>WENV183513297 OMKS01003901 [OMKS] sediment metagenome; hot spring sediment 2001 2078 + Asp GTC [ENA] ¢þ
>WENV183514270 OMKS01014769 [OMKS] sediment metagenome; hot spring sediment 3288 3365 + Asp GTC [ENA] ¢þ
>WENV170647668 JREQ01001778 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 493 416 - Asp GTC [ENA] ¢þ
>WENV170647717 JREQ01003052 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 5193 5116 - Asp GTC [ENA] ¢þ
>WENV170647745 JREQ01003803 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 1166 1089 - Asp GTC [ENA] ¢þ
>WENV170647811 JREQ01005761 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 417 340 - Asp GTC [ENA] ¢þ
>SRA1002356 SRR001322.65658 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 21 96 + Asp GTC [SRA]
Identical group No.173243 (1 seq.)
>SRA1002332 SRR001322.9121 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 35 111 + Asp GTC [SRA]
Identical group No.219100 (4 seq.)
>W141289717 JARN01000018 Chloroflexota Dehalococcoidia bacterium DscP2 [JARN] 7274 7349 + Asp GTC [ENA] ¡û
>WENV170018323 BARW01001184 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 337 411 + Asp GTC [ENA] ¢þ
>WENV170647899 JRER01001073 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 11040 11114 + Asp GTC [ENA] ¢þ
>SRA1002543 SRR001326.31376 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 3 77 + Asp GTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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