tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = TCG

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.152003 (1 seq.)
>SRA1002403 SRR001323.58166 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 10 89 + Arg TCG [SRA]
Identical group No.155447 (1 seq.)
>SRA1002385 SRR001323.27551 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 75 -1 - Arg TCG [SRA]
Identical group No.192394 (20 seq.)
>W1711408403 MGMO01000077 Chloroflexota Chloroflexi bacterium RBG_13_48_17 [MGMO] 10781 10855 + Arg TCG [ENA] ¡û
>W1711408502 MGMS01000025 Chloroflexota Chloroflexi bacterium RBG_13_51_36 [MGMS] 5343 5417 + Arg TCG [ENA] ¡û
>W1711584176 MNYE01000120 Chloroflexota Dehalococcoidia bacterium CG2_30_46_9 [MNYE] 1438 1514 + Arg TCG [ENA] ¡û
>WENV180013197 FMSI01054887 [FMSI] soil metagenome; Soil 5007 4931 - Arg TCG [ENA] ¢þ
>WENV180013572 FMSI01104956 [FMSI] soil metagenome; Soil 7182 7108 - Arg TCG [ENA] ¢þ
>WENV180036575 FVAA010182842 [FVAA] soil metagenome; Soil 1 77 + Arg TCG [ENA] ¢þ
>WENV181409401 OGCI01000157 [OGCI] hot springs metagenome; Hot spring water 44248 44324 + Arg TCG [ENA] ¢þ
>WENV181415479 OGCL01011871 [OGCL] hot springs metagenome; Hot spring water 2409 2333 - Arg TCG [ENA] ¢þ
>WENV183514002 OMKS01010357 [OMKS] sediment metagenome; hot spring sediment 3920 3994 + Arg TCG [ENA] ¢þ
>WENV183702101 PDVH01014098 [PDVH] alkali sediment metagenome; glacial lake sediment 385 461 + Arg TCG [ENA] ¢þ
>WENV183703178 PDVJ01004453 [PDVJ] alkali sediment metagenome; glacial lake sediment 3869 3943 + Arg TCG [ENA] ¢þ
>WENV183703776 PDVJ01044825 [PDVJ] alkali sediment metagenome; glacial lake sediment 617 691 + Arg TCG [ENA] ¢þ
>WENV170018030 BARV01006146 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 451 527 + Arg TCG [ENA] ¢þ
>WENV170647723 JREQ01003175 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 2732 2808 + Arg TCG [ENA] ¢þ
>WENV170647885 JRER01000887 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2 78 + Arg TCG [ENA] ¢þ
>WENV170647962 JRER01001678 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 648 724 + Arg TCG [ENA] ¢þ
>WENV170647963 JRER01001678 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 8515 8589 + Arg TCG [ENA] ¢þ
>W1910725740 MGOF01000009 Chloroflexota Chloroflexi bacterium RBG_19FT_COMBO_47_15 [MGOF] 1291 1365 + Arg TCG [ENA] ¡û
>W1910725743 MGOF01000018 Chloroflexota Chloroflexi bacterium RBG_19FT_COMBO_47_15 [MGOF] 9085 9009 - Arg TCG [ENA] ¡û
>SRA1002511 SRR001325.67424 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 34 110 + Arg TCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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