tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = TGC

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.158378 (5 seq.)
>WENV170647760 JREQ01004067 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 6648 6571 - Ala TGC [ENA] ¢þ
>WENV170647765 JREQ01004216 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 779 702 - Ala TGC [ENA] ¢þ
>WENV170647808 JREQ01005523 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 4673 4596 - Ala TGC [ENA] ¢þ
>SRA1002550 SRR001326.56401 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 98 21 - Ala TGC [SRA]
>W1610629279 LIHK01000014 Unclassified Candidatus Bathyarchaeota archaeon BA2 [LIHK] 61900 61825 - Ala TGC [ENA] ¡û
Identical group No.163217 (2 seq.)
>SRA1002339 SRR001322.22339 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 76 1 - Ala TGC [SRA]
>SRA1002551 SRR001326.58920 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 91 14 - Ala TGC [SRA]
Identical group No.298721 (28 seq.)
>W1711408410 MGMP01000017 Chloroflexota Chloroflexi bacterium RBG_13_50_10 [MGMP] 1976 1902 - Ala TGC [ENA] ¡û
>W1711408415 MGMP01000048 Chloroflexota Chloroflexi bacterium RBG_13_50_10 [MGMP] 6922 6847 - Ala TGC [ENA] ¡û
>W1711408611 MGMY01000091 Chloroflexota Chloroflexi bacterium RBG_13_54_9 [MGMY] 7378 7304 - Ala TGC [ENA] ¡û
>W1711584124 MNYD01000090 Chloroflexota Dehalococcoidia bacterium CG2_30_46_19 [MNYD] 2778 2705 - Ala TGC [ENA] ¡û
>WENV180254013 OBEQ010594666 [OBEQ] groundwater metagenome; groundwater 2272 2197 - Ala TGC [ENA] ¢þ
>WENV180372801 OBOI01130741 [OBOI] sediment metagenome; sediment 293 219 - Ala TGC [ENA] ¢þ
>W141066486 ARPL01000020 Chloroflexota Dehalococcoidia bacterium SCGC AB-539-J10 [ARPL] 14063 14138 + Ala TGC [ENA] ¡û
>WENV181409173 OGCI01000022 [OGCI] hot springs metagenome; Hot spring water 141580 141507 - Ala TGC [ENA] ¢þ
>WENV183668040 ORJL010706533 [ORJL] groundwater metagenome; groundwater 12379 12304 - Ala TGC [ENA] ¢þ
>WENV183668365 ORJL010734397 [ORJL] groundwater metagenome; groundwater 410 337 - Ala TGC [ENA] ¢þ
>WENV183678593 ORJL011898096 [ORJL] groundwater metagenome; groundwater 1354 1429 + Ala TGC [ENA] ¢þ
>WENV183694607 ORMF012258629 [ORMF] groundwater metagenome; groundwater 334 259 - Ala TGC [ENA] ¢þ
>WENV183702085 PDVH01012710 [PDVH] alkali sediment metagenome; glacial lake sediment 1387 1314 - Ala TGC [ENA] ¢þ
>WENV183703215 PDVJ01005686 [PDVJ] alkali sediment metagenome; glacial lake sediment 2172 2245 + Ala TGC [ENA] ¢þ
>WENV183806157 PVBE011090142 [PVBE] marine metagenome; water 265 340 + Ala TGC [ENA] ¢þ
>WENV170017160 BARS01059434 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 129 54 - Ala TGC [ENA] ¢þ
>WENV170017888 BARU01038887 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 152 225 + Ala TGC [ENA] ¢þ
>WENV170018134 BARV01018069 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 435 509 + Ala TGC [ENA] ¢þ
>WENV170018159 BARV01020507 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 541 468 - Ala TGC [ENA] ¢þ
>WENV170018231 BARV01028220 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 492 417 - Ala TGC [ENA] ¢þ
>WENV170018232 BARV01028347 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 612 687 + Ala TGC [ENA] ¢þ
>WENV170018422 BARW01014396 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 489 414 - Ala TGC [ENA] ¢þ
>WENV170018558 BARW01041386 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 277 202 - Ala TGC [ENA] ¢þ
>WENV170647707 JREQ01002876 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 3119 3194 + Ala TGC [ENA] ¢þ
>WENV170647884 JRER01000885 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 101 26 - Ala TGC [ENA] ¢þ
>WENV170647953 JRER01001662 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2604 2679 + Ala TGC [ENA] ¢þ
>WENV170648132 JRER01005475 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2799 2874 + Ala TGC [ENA] ¢þ
>SRA1002386 SRR001323.31007 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 16 89 + Ala TGC [SRA]
Identical group No.298733 (11 seq.)
>WENV180061571 MPLX02233108 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 168 93 - Ala TGC [ENA] ¢þ
>WENV183514868 OMKS01035185 [OMKS] sediment metagenome; hot spring sediment 1553 1626 + Ala TGC [ENA] ¢þ
>WENV170017436 BART01028092 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 299 226 - Ala TGC [ENA] ¢þ
>WENV170017534 BART01039036 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 299 226 - Ala TGC [ENA] ¢þ
>WENV170017873 BARU01035695 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 316 390 + Ala TGC [ENA] ¢þ
>WENV170018235 BARV01029118 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 412 337 - Ala TGC [ENA] ¢þ
>WENV170209783 CEPV01085588 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 768 843 + Ala TGC [ENA] ¢þ
>WENV170383737 CETX01141114 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 625 550 - Ala TGC [ENA] ¢þ
>SRA1002404 SRR001323.59359 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 93 + Ala TGC [SRA]
>SRA1002480 SRR001324.71539 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 75 1 - Ala TGC [SRA]
>SRA1032270 SRR035087.592049 454 Sequencing (SRP001808) 65 140 + Ala TGC [SRA]
Identical group No.337778 (8 seq.)
>WENV183675797 ORJL011550000 [ORJL] groundwater metagenome; groundwater 1538 1463 - Ala TGC [ENA] ¢þ
>WENV183687116 ORMF011097969 [ORMF] groundwater metagenome; groundwater 848 923 + Ala TGC [ENA] ¢þ
>WENV170573687 FLYL01017318 [FLYL] hot springs metagenome; Sediment 85 158 + Ala TGC [ENA] ¢þ
>W09109897 ABUQ01000006 Thermomicrobiota Sphaerobacter thermophilus DSM 20745 [ABUQ] 26760 26835 + Ala TGC [ENA] ¡û
>W141820018 JQMP01000003 Thermomicrobiota Thermorudis peleae KI4 [JQMP] 1073111 1073186 + Ala TGC [ENA] ¡û
>C09110708 CP001275 Thermomicrobiota Thermomicrobium roseum DSM 5159 [CP001275] 982842 982769 - Ala TGC [Ensembl] ¡û
>SRA1002363 SRR001322.72719 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 92 18 - Ala TGC [SRA]
>C10112704 CP001823 Thermomicrobiota Sphaerobacter thermophilus DSM 20745 [CP001823, CP001824] 581404 581479 + Ala TGC [Ensembl] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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