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tRNA genes clustered and arranged according to each identical group

Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)

Anticodon = AGT

HIT: 3 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.421359 (12 seq.)
>WENV180046364 MPLT02089098 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 188 260 + Thr AGT [ENA]
>WENV181305438 OFIG01009002 [OFIG] marine metagenome; seawater 389 463 + Thr AGT [ENA]
>WENV181308802 OFIT01018117 [OFIT] marine metagenome; seawater 483 408 - Thr AGT [ENA]
>WENV181314540 OFJK01009618 [OFJK] marine metagenome; seawater 480 408 - Thr AGT [ENA]
>WENV181315354 OFJO01006504 [OFJO] marine metagenome; seawater 225 299 + Thr AGT [ENA]
>WENV181320317 OFKG01011167 [OFKG] marine metagenome; seawater 102 176 + Thr AGT [ENA]
>WENV181403196 OFUA01003332 [OFUA] marine metagenome; seawater 678 604 - Thr AGT [ENA]
>WENV170184901 CEOZ01156279 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 256 - Thr AGT [ENA]
>WENV170493778 CEVR01028824 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 191 266 + Thr AGT [ENA]
>WENV170763008 LWDU01000868 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 3842 3916 + Thr AGT [ENA]
>SRA1007910 SRR020490.117344 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 147 75 - Thr AGT [SRA]
>SRA1010238 SRR020491.499490 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 120 45 - Thr AGT [SRA]
Identical group No.431567 (1 seq.)
>SRA1008777 SRR020491.21313 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 213 139 - Thr AGT [SRA]
Identical group No.431635 (1 seq.)
>SRA1009454 SRR020491.236177 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 129 201 + Thr AGT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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