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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Mimiviridae
Anticodon = GCA
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.348600 (3 seq.)
>VRL181000085
JN885999
dsDNAviruses,noRNAstage
Moumouvirus Monve (JN885999)
200300
200226
-
Cys
GCA
[ENA]
¡û
>VRL181000093
JX962719
Mimiviridae
Acanthamoeba polyphaga moumouvirus M10A (JX962719)
96877
96951
+
Cys
GCA
[ENA]
¡û
>VRL181000591
KY110734
Mimiviridae
Saudi moumouvirus (KY110734)
113259
113333
+
Cys
GCA
[ENA]
¡û
Identical group No.365734 (2 seq.)
>VRL181000382
KC008572
Mimiviridae
Moumouvirus goulette (KC008572)
902372
902298
-
Cys
GCA
[ENA]
¡û
>VRL181000750
MG807320
Mimiviridae
Moumouvirus australiensis (MG807320)
146268
146342
+
Cys
GCA
[ENA]
¡û
Identical group No.411075 (14 seq.)
>VRL0100077
AY653733
Mimiviridae
Acanthamoeba polyphaga mimivirus
352272
352343
+
Cys
GCA
[ENA]
¡û
>VRL181000003
FM992074
Mimiviridae
Acanthamoeba polyphaga mimivirus (FM992074)
91
162
+
Cys
GCA
[ENA]
¡û
>VRL181000038
HQ336222
Mimiviridae
Acanthamoeba polyphaga mimivirus (HQ336222)
352275
352346
+
Cys
GCA
[ENA]
¡û
>VRL181000058
JF801956
Mimiviridae
Acanthamoeba castellanii mamavirus Hal-V (JF801956)
363679
363750
+
Cys
GCA
[ENA]
¡û
>VRL181000064
JN036606
Mimiviridae
Acanthamoeba polyphaga mimivirus (JN036606)
250439
250510
+
Cys
GCA
[ENA]
¡û
>VRL181000406
KF493731
Mimiviridae
Hirudovirus strain Sangsue (KF493731)
828461
828390
-
Cys
GCA
[ENA]
¡û
>VRL181000411
KF527228
Mimiviridae
Mimivirus terra2 (KF527228)
116365
116436
+
Cys
GCA
[ENA]
¡û
>VRL181000419
KF959826
Mimiviridae
Samba virus (KF959826)
352275
352346
+
Cys
GCA
[ENA]
¡û
>VRL181000456
KM982401
Mimiviridae
Acanthamoeba polyphaga mimivirus Oyster (KM982401)
342731
342802
+
Cys
GCA
[ENA]
¡û
>VRL181000465
KM982403
Mimiviridae
Acanthamoeba polyphaga mimivirus Amazonia (KM982403)
324738
324809
+
Cys
GCA
[ENA]
¡û
>VRL181000499
AP017644
Mimiviridae
Acanthamoeba castellanii mimivirus Mimivirus kasaii (AP017644)
355647
355718
+
Cys
GCA
[ENA]
¡û
>VRL181000505
AP017645
Mimiviridae
Acanthamoeba castellanii mimivirus Mimivirus shirakomae (AP017645)
355497
355568
+
Cys
GCA
[ENA]
¡û
>VRL181000512
KT599914
Mimiviridae
Niemeyer virus (KT599914)
394309
394380
+
Cys
GCA
[ENA]
¡û
>VRL181000527
KU761889
Mimiviridae
Mimivirus Bombay (KU761889)
353931
354002
+
Cys
GCA
[ENA]
¡û
Identical group No.490199 (7 seq.)
>VRL181000078
JN885990
Mimiviridae
Megavirus courdo7 (JN885990)
108836
108906
+
Cys
GCA
[ENA]
¡û
>VRL181000088
JX885207
Mimiviridae
Megavirus lba (JX885207)
113090
113160
+
Cys
GCA
[ENA]
¡û
>VRL181000095
JX975216
Mimiviridae
Megavirus courdo11 (JX975216)
131844
131914
+
Cys
GCA
[ENA]
¡û
>VRL181000533
KU877344
Mimiviridae
Powai lake megavirus (KU877344)
132297
132367
+
Cys
GCA
[ENA]
¡û
>VRL181000729
MG602507
Mimiviridae
Acanthamoeba polyphaga mimivirus (MG602507)
138569
138639
+
Cys
GCA
[ENA]
¡û
>VRL181000740
MG779309
Mimiviridae
Bandra megavirus (MG779309)
7591
7661
+
Cys
GCA
[ENA]
¡û
>VRL181000743
MG807319
Mimiviridae
Megavirus vitis (MG807319)
140578
140648
+
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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