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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Myoviridae
Anticodon = CCT
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.363241 (1 seq.)
>PHG0100521
EU826466
Myoviridae
Mycobacterium phage Myrna N4 (EU826466)
96160
96234
+
Arg
CCT
[ENA]
¡û
Identical group No.414266 (1 seq.)
>PHG183000382
KU682439
Myoviridae
Stenotrophomonas phage vB_SmaS-DLP_6 (KU682439)
92962
93038
+
Arg
CCT
[ENA]
¡û
Identical group No.460847 (1 seq.)
>PHG0100318
AY682195
Myoviridae
Lactobacillus virus LP65 ATCC 11303-B5 (AY682195)
53613
53541
-
Arg
CCT
[ENA]
¡û
Identical group No.460856 (51 seq.)
>PHG0100224
AY129337
Myoviridae
Mycobacterium phage Bxz1 PaP3 (AY129337)
99972
100045
+
Arg
CCT
[ENA]
¡û
>PHG0100455
DQ398053
Myoviridae
Mycobacterium phage Catera Brazil-1 (DQ398053)
95960
96033
+
Arg
CCT
[ENA]
¡û
>PHG0100541
EU826467
Myoviridae
Mycobacterium phage Rizal N4 (EU826467)
95704
95777
+
Arg
CCT
[ENA]
¡û
>PHG0100562
EU826468
Myoviridae
Mycobacterium phage Spud N4 (EU826468)
97382
97455
+
Arg
CCT
[ENA]
¡û
>PHG0100582
EU826469
Myoviridae
Mycobacterium phage ScottMcG N4 (EU826469)
96266
96339
+
Arg
CCT
[ENA]
¡û
>PHG0100604
EU826471
Myoviridae
Mycobacterium phage Cali N4 (EU826471)
98313
98386
+
Arg
CCT
[ENA]
¡û
>PHG181001237
KR080196
Myoviridae
Mycobacterium phage Momo (KR080196)
96516
96589
+
Arg
CCT
[ENA]
¡û
>PHG181001480
KT281790
Myoviridae
Mycobacterium phage HyRo (KT281790)
96843
96916
+
Arg
CCT
[ENA]
¡û
>PHG181001550
KT321476
Myoviridae
Mycobacterium phage Zeenon (KT321476)
97562
97635
+
Arg
CCT
[ENA]
¡û
>PHG181001629
KT365398
Myoviridae
Mycobacterium phage DTDevon (KT365398)
99040
99113
+
Arg
CCT
[ENA]
¡û
>PHG181001650
KT365400
Myoviridae
Mycobacterium phage ErnieJ (KT365400)
96242
96315
+
Arg
CCT
[ENA]
¡û
>PHG181003197
KX369583
Myoviridae
Mycobacterium phage Littleton (KX369583)
97676
97749
+
Arg
CCT
[ENA]
¡û
>PHG181003513
KX721255
Myoviridae
Mycobacterium phage Yucca (KX721255)
97910
97983
+
Arg
CCT
[ENA]
¡û
>PHG181003538
KX721256
Myoviridae
Mycobacterium phage Erdmann (KX721256)
97937
98010
+
Arg
CCT
[ENA]
¡û
>PHG181003563
KX752698
Myoviridae
Mycobacterium phage Tonenili (KX752698)
101657
101730
+
Arg
CCT
[ENA]
¡û
>PHG181003600
KX781992
Myoviridae
Mycobacterium phage Gabriel (KX781992)
96533
96606
+
Arg
CCT
[ENA]
¡û
>PHG181003638
KX831080
Myoviridae
Mycobacterium phage Lukilu (KX831080)
97984
98057
+
Arg
CCT
[ENA]
¡û
>PHG181006183
MF919493
Myoviridae
Mycobacterium phage Audrick (MF919493)
97198
97271
+
Arg
CCT
[ENA]
¡û
>PHG181006206
MF919494
Myoviridae
Mycobacterium phage BeanWater (MF919494)
96560
96633
+
Arg
CCT
[ENA]
¡û
>PHG181006230
MF919495
Myoviridae
Mycobacterium phage Bigswole (MF919495)
99544
99617
+
Arg
CCT
[ENA]
¡û
>PHG181006252
MF919499
Myoviridae
Mycobacterium phage Daffodil (MF919499)
97267
97340
+
Arg
CCT
[ENA]
¡û
>PHG181006279
MF919513
Myoviridae
Mycobacterium phage Koguma (MF919513)
95552
95625
+
Arg
CCT
[ENA]
¡û
>PHG181006309
MF919527
Myoviridae
Mycobacterium phage Phox (MF919527)
98180
98253
+
Arg
CCT
[ENA]
¡û
>PHG181007336
MG812493
Myoviridae
Mycobacterium phage NuevoMundo (MG812493)
99890
99963
+
Arg
CCT
[ENA]
¡û
>PHG181007358
MG812494
Myoviridae
Mycobacterium phage Pier (MG812494)
99432
99505
+
Arg
CCT
[ENA]
¡û
>PHG181007384
MG872839
Myoviridae
Mycobacterium phage LifeSavor (MG872839)
97425
97498
+
Arg
CCT
[ENA]
¡û
>PHG181007644
MH051260
Myoviridae
Mycobacterium phage InterFolia (MH051260)
99264
99337
+
Arg
CCT
[ENA]
¡û
>PHG181007668
MH051261
Myoviridae
Mycobacterium phage Tyke (MH051261)
98816
98889
+
Arg
CCT
[ENA]
¡û
>PHG181007689
MH051266
Myoviridae
Mycobacterium phage MikeLiesIn (MH051266)
98150
98223
+
Arg
CCT
[ENA]
¡û
>PHG181007968
MH316561
Myoviridae
Mycobacterium phage Derek (MH316561)
97568
97641
+
Arg
CCT
[ENA]
¡û
>PHG181007994
MH316567
Myoviridae
Mycobacterium phage ParkTD (MH316567)
97264
97337
+
Arg
CCT
[ENA]
¡û
>PHG14100213
GQ303260
Myoviridae
Mycobacterium phage ET08 ATCC 35860-B1 (GQ303260)
96796
96869
+
Arg
CCT
[ENA]
¡û
>PHG14100234
GQ303262
Myoviridae
Mycobacterium phage LRRHood ATCC 35860-B1 (GQ303262)
96974
97047
+
Arg
CCT
[ENA]
¡û
>PHG14100876
JF704092
Myoviridae
Mycobacterium phage Alice MB56Spyo045 (JF704092)
95837
95910
+
Arg
CCT
[ENA]
¡û
>PHG14100896
JF704096
Myoviridae
Mycobacterium phage Ghost MB56Spyo045 (JF704096)
97219
97292
+
Arg
CCT
[ENA]
¡û
>PHG14100944
JF704116
Myoviridae
Mycobacterium phage Drazdys (JF704116)
97583
97656
+
Arg
CCT
[ENA]
¡û
>PHG14101080
JN204348
Myoviridae
Mycobacterium phage Sebata (JN204348)
98747
98820
+
Arg
CCT
[ENA]
¡û
>PHG14101151
JN412588
Myoviridae
Mycobacterium phage Dandelion (JN412588)
101362
101435
+
Arg
CCT
[ENA]
¡û
>PHG14101172
JN412592
Myoviridae
Mycobacterium phage LinStu Patience (JN412592)
97570
97643
+
Arg
CCT
[ENA]
¡û
>PHG14101202
JN624850
Myoviridae
Mycobacterium phage Pleione (JN624850)
97743
97816
+
Arg
CCT
[ENA]
¡û
>PHG14101250
JN699013
Myoviridae
Mycobacterium phage Pio ThreeOh3D2 (JN699013)
100627
100700
+
Arg
CCT
[ENA]
¡û
>PHG14101272
JN699625
Myoviridae
Mycobacterium phage Wally ThreeOh3D2 (JN699625)
96732
96805
+
Arg
CCT
[ENA]
¡û
>PHG14101293
JN699626
Myoviridae
Mycobacterium phage MoMoMixon (JN699626)
96778
96851
+
Arg
CCT
[ENA]
¡û
>PHG14101609
JQ911768
Myoviridae
Mycobacterium phage Ava3 Lu11 (JQ911768)
96699
96772
+
Arg
CCT
[ENA]
¡û
>PHG14102224
KC691257
Myoviridae
Mycobacterium phage Astraea Gb1 (KC691257)
96608
96681
+
Arg
CCT
[ENA]
¡û
>PHG14102246
KC748968
Myoviridae
Mycobacterium phage Gizmo Gb1 (KC748968)
99294
99367
+
Arg
CCT
[ENA]
¡û
>PHG14102269
KC748970
Myoviridae
Mycobacterium phage ArcherS7 Gb1 (KC748970)
97546
97619
+
Arg
CCT
[ENA]
¡û
>PHG14102452
KF006817
Myoviridae
Mycobacterium phage Breeniome phi47:1 (KF006817)
96559
96632
+
Arg
CCT
[ENA]
¡û
>PHG14102494
KF024734
Myoviridae
Mycobacterium phage Shrimp phi47:1 (KF024734)
98280
98353
+
Arg
CCT
[ENA]
¡û
>PHG14102999
KJ595575
Myoviridae
Mycobacterium phage Willis LMSP-25 (KJ595575)
97163
97236
+
Arg
CCT
[ENA]
¡û
>PHG14103361
KM881426
Myoviridae
Mycobacterium phage ZygoTaiga pEcSw (KM881426)
98183
98256
+
Arg
CCT
[ENA]
¡û
Identical group No.506681 (1 seq.)
>PHG14101314
JN699627
Myoviridae
Mycobacterium phage Nappy (JN699627)
98342
98415
+
Arg
CCT
[ENA]
¡û
Identical group No.536340 (1 seq.)
>PHG181006000
MF668280
Myoviridae
Mycobacterium phage Phabba (MF668280)
94490
94563
+
Arg
CCT
[ENA]
¡û
Identical group No.628097 (2 seq.)
>PHG0100612
FJ230960
Myoviridae
Bacillus virus SPO1 wBol1b (FJ230960)
32596
32670
+
Arg
CCT
[ENA]
¡û
>PHG14102617
KF669649
Myoviridae
Bacillus phage CampHawk PM6 (KF669649)
33500
33574
+
Arg
CCT
[ENA]
¡û
Identical group No.638990 (1 seq.)
>PHG182000066
MG592553
Myoviridae
Vibrio phage 1.187.O._10N.286.49.F1 (MG592553)
53411
53484
+
Arg
CCT
[ENA]
¡û
Identical group No.726822 (1 seq.)
>PHG14100104
FJ822135
Myoviridae
Lactobacillus virus Lb338-1 (FJ822135)
23880
23807
-
Arg
CCT
[ENA]
¡û
Identical group No.744946 (1 seq.)
>PHG14100523
HM242243
Myoviridae
Brochothrix phage A9 CrimD (HM242243)
25832
25761
-
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK