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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Myoviridae
Anticodon = CTC
HIT:
9 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.279413 (5 seq.)
>PHG0100445
DQ398053
Myoviridae
Mycobacterium phage Catera Brazil-1 (DQ398053)
91876
91950
+
Glu
CTC
[ENA]
¡û
>PHG181001226
KR080196
Myoviridae
Mycobacterium phage Momo (KR080196)
92540
92614
+
Glu
CTC
[ENA]
¡û
>PHG181001639
KT365400
Myoviridae
Mycobacterium phage ErnieJ (KT365400)
92266
92340
+
Glu
CTC
[ENA]
¡û
>PHG181006172
MF919493
Myoviridae
Mycobacterium phage Audrick (MF919493)
93222
93296
+
Glu
CTC
[ENA]
¡û
>PHG14100885
JF704096
Myoviridae
Mycobacterium phage Ghost MB56Spyo045 (JF704096)
93243
93317
+
Glu
CTC
[ENA]
¡û
Identical group No.297347 (30 seq.)
>PHG0100531
EU826467
Myoviridae
Mycobacterium phage Rizal N4 (EU826467)
91617
91691
+
Glu
CTC
[ENA]
¡û
>PHG0100551
EU826468
Myoviridae
Mycobacterium phage Spud N4 (EU826468)
93754
93828
+
Glu
CTC
[ENA]
¡û
>PHG0100571
EU826469
Myoviridae
Mycobacterium phage ScottMcG N4 (EU826469)
92638
92712
+
Glu
CTC
[ENA]
¡û
>PHG0100591
EU826471
Myoviridae
Mycobacterium phage Cali N4 (EU826471)
94077
94151
+
Glu
CTC
[ENA]
¡û
>PHG181001618
KT365398
Myoviridae
Mycobacterium phage DTDevon (KT365398)
95065
95139
+
Glu
CTC
[ENA]
¡û
>PHG181003527
KX721256
Myoviridae
Mycobacterium phage Erdmann (KX721256)
94307
94381
+
Glu
CTC
[ENA]
¡û
>PHG181003551
KX752698
Myoviridae
Mycobacterium phage Tonenili (KX752698)
97900
97974
+
Glu
CTC
[ENA]
¡û
>PHG181003589
KX781992
Myoviridae
Mycobacterium phage Gabriel (KX781992)
92558
92632
+
Glu
CTC
[ENA]
¡û
>PHG181003627
KX831080
Myoviridae
Mycobacterium phage Lukilu (KX831080)
94354
94428
+
Glu
CTC
[ENA]
¡û
>PHG181006195
MF919494
Myoviridae
Mycobacterium phage BeanWater (MF919494)
92930
93004
+
Glu
CTC
[ENA]
¡û
>PHG181006218
MF919495
Myoviridae
Mycobacterium phage Bigswole (MF919495)
95686
95760
+
Glu
CTC
[ENA]
¡û
>PHG181006241
MF919499
Myoviridae
Mycobacterium phage Daffodil (MF919499)
93639
93713
+
Glu
CTC
[ENA]
¡û
>PHG181006267
MF919513
Myoviridae
Mycobacterium phage Koguma (MF919513)
91488
91562
+
Glu
CTC
[ENA]
¡û
>PHG181006297
MF919527
Myoviridae
Mycobacterium phage Phox (MF919527)
94378
94452
+
Glu
CTC
[ENA]
¡û
>PHG181007325
MG812493
Myoviridae
Mycobacterium phage NuevoMundo (MG812493)
96261
96335
+
Glu
CTC
[ENA]
¡û
>PHG181007347
MG812494
Myoviridae
Mycobacterium phage Pier (MG812494)
95803
95877
+
Glu
CTC
[ENA]
¡û
>PHG181007656
MH051261
Myoviridae
Mycobacterium phage Tyke (MH051261)
94753
94827
+
Glu
CTC
[ENA]
¡û
>PHG181007678
MH051266
Myoviridae
Mycobacterium phage MikeLiesIn (MH051266)
93960
94034
+
Glu
CTC
[ENA]
¡û
>PHG181007983
MH316567
Myoviridae
Mycobacterium phage ParkTD (MH316567)
93636
93710
+
Glu
CTC
[ENA]
¡û
>PHG14100201
GQ303260
Myoviridae
Mycobacterium phage ET08 ATCC 35860-B1 (GQ303260)
92687
92761
+
Glu
CTC
[ENA]
¡û
>PHG14100223
GQ303262
Myoviridae
Mycobacterium phage LRRHood ATCC 35860-B1 (GQ303262)
93344
93418
+
Glu
CTC
[ENA]
¡û
>PHG14101191
JN624850
Myoviridae
Mycobacterium phage Pleione (JN624850)
93767
93841
+
Glu
CTC
[ENA]
¡û
>PHG14101282
JN699626
Myoviridae
Mycobacterium phage MoMoMixon (JN699626)
93093
93167
+
Glu
CTC
[ENA]
¡û
>PHG14101598
JQ911768
Myoviridae
Mycobacterium phage Ava3 Lu11 (JQ911768)
93071
93145
+
Glu
CTC
[ENA]
¡û
>PHG14102234
KC748968
Myoviridae
Mycobacterium phage Gizmo Gb1 (KC748968)
95233
95307
+
Glu
CTC
[ENA]
¡û
>PHG14102258
KC748970
Myoviridae
Mycobacterium phage ArcherS7 Gb1 (KC748970)
93571
93645
+
Glu
CTC
[ENA]
¡û
>PHG14102442
KF006817
Myoviridae
Mycobacterium phage Breeniome phi47:1 (KF006817)
92583
92657
+
Glu
CTC
[ENA]
¡û
>PHG14102484
KF024734
Myoviridae
Mycobacterium phage Shrimp phi47:1 (KF024734)
94303
94377
+
Glu
CTC
[ENA]
¡û
>PHG14102988
KJ595575
Myoviridae
Mycobacterium phage Willis LMSP-25 (KJ595575)
93535
93609
+
Glu
CTC
[ENA]
¡û
>PHG14103350
KM881426
Myoviridae
Mycobacterium phage ZygoTaiga pEcSw (KM881426)
94555
94629
+
Glu
CTC
[ENA]
¡û
Identical group No.414277 (1 seq.)
>PHG181002133
KU682439
Myoviridae
Stenotrophomonas phage vB_SmaS-DLP_6 (KU682439)
108661
108737
+
Glu
CTC
[ENA]
¡û
Identical group No.602856 (1 seq.)
>PHG14100692
HQ615693
Myoviridae
Synechococcus phage S-CRM01 VH-P22 (HQ615693)
132042
132116
+
Glu
CTC
[ENA]
¡û
Identical group No.620393 (1 seq.)
>PHG14102850
KJ473422
Myoviridae
Acinetobacter phage vB_AbaM_Acibel004 TahiMoana (KJ473422)
63097
63172
+
Glu
CTC
[ENA]
¡û
Identical group No.646283 (1 seq.)
>PHG181003675
KX925554
Myoviridae
Streptomyces phage BRock (KX925554)
105704
105631
-
Glu
CTC
[ENA]
¡û
Identical group No.786872 (17 seq.)
>PHG0100213
AY129337
Myoviridae
Mycobacterium phage Bxz1 PaP3 (AY129337)
95998
96069
+
Glu
CTC
[ENA]
¡û
>PHG181001469
KT281790
Myoviridae
Mycobacterium phage HyRo (KT281790)
92813
92884
+
Glu
CTC
[ENA]
¡û
>PHG181001539
KT321476
Myoviridae
Mycobacterium phage Zeenon (KT321476)
93539
93610
+
Glu
CTC
[ENA]
¡û
>PHG181003186
KX369583
Myoviridae
Mycobacterium phage Littleton (KX369583)
93703
93774
+
Glu
CTC
[ENA]
¡û
>PHG181003501
KX721255
Myoviridae
Mycobacterium phage Yucca (KX721255)
93453
93524
+
Glu
CTC
[ENA]
¡û
>PHG181007375
MG872839
Myoviridae
Mycobacterium phage LifeSavor (MG872839)
92864
92935
+
Glu
CTC
[ENA]
¡û
>PHG181007633
MH051260
Myoviridae
Mycobacterium phage InterFolia (MH051260)
94997
95068
+
Glu
CTC
[ENA]
¡û
>PHG181007957
MH316561
Myoviridae
Mycobacterium phage Derek (MH316561)
93379
93450
+
Glu
CTC
[ENA]
¡û
>PHG14100870
JF704092
Myoviridae
Mycobacterium phage Alice MB56Spyo045 (JF704092)
92902
92973
+
Glu
CTC
[ENA]
¡û
>PHG14100933
JF704116
Myoviridae
Mycobacterium phage Drazdys (JF704116)
93049
93120
+
Glu
CTC
[ENA]
¡û
>PHG14101069
JN204348
Myoviridae
Mycobacterium phage Sebata (JN204348)
94755
94826
+
Glu
CTC
[ENA]
¡û
>PHG14101141
JN412588
Myoviridae
Mycobacterium phage Dandelion (JN412588)
97054
97125
+
Glu
CTC
[ENA]
¡û
>PHG14101161
JN412592
Myoviridae
Mycobacterium phage LinStu Patience (JN412592)
93495
93566
+
Glu
CTC
[ENA]
¡û
>PHG14101239
JN699013
Myoviridae
Mycobacterium phage Pio ThreeOh3D2 (JN699013)
96654
96725
+
Glu
CTC
[ENA]
¡û
>PHG14101261
JN699625
Myoviridae
Mycobacterium phage Wally ThreeOh3D2 (JN699625)
92175
92246
+
Glu
CTC
[ENA]
¡û
>PHG14101304
JN699627
Myoviridae
Mycobacterium phage Nappy (JN699627)
94658
94729
+
Glu
CTC
[ENA]
¡û
>PHG14102213
KC691257
Myoviridae
Mycobacterium phage Astraea Gb1 (KC691257)
92071
92142
+
Glu
CTC
[ENA]
¡û
Identical group No.802042 (1 seq.)
>PHG181005986
MF668280
Myoviridae
Mycobacterium phage Phabba (MF668280)
91700
91771
+
Glu
CTC
[ENA]
¡û
Identical group No.806780 (1 seq.)
>PHG0100510
EU826466
Myoviridae
Mycobacterium phage Myrna N4 (EU826466)
93010
93081
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK