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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Myoviridae
Anticodon = GCC
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.244057 (6 seq.)
>PHG0100601
EU826471
Myoviridae
Mycobacterium phage Cali N4 (EU826471)
97485
97560
+
Gly
GCC
[ENA]
¡û
>PHG181003510
KX721255
Myoviridae
Mycobacterium phage Yucca (KX721255)
97082
97157
+
Gly
GCC
[ENA]
¡û
>PHG181006276
MF919513
Myoviridae
Mycobacterium phage Koguma (MF919513)
94724
94799
+
Gly
GCC
[ENA]
¡û
>PHG181007665
MH051261
Myoviridae
Mycobacterium phage Tyke (MH051261)
97988
98063
+
Gly
GCC
[ENA]
¡û
>PHG14100210
GQ303260
Myoviridae
Mycobacterium phage ET08 ATCC 35860-B1 (GQ303260)
95968
96043
+
Gly
GCC
[ENA]
¡û
>PHG14102243
KC748968
Myoviridae
Mycobacterium phage Gizmo Gb1 (KC748968)
98467
98542
+
Gly
GCC
[ENA]
¡û
Identical group No.460844 (3 seq.)
>PHG0300030
AY129337
Myoviridae
Mycobacterium phage Bxz1 PaP3 (AY129337)
99155
99228
+
Gly
GCC
[ENA]
¡û
>PHG0300088
DQ398053
Myoviridae
Mycobacterium phage Catera Brazil-1 (DQ398053)
95144
95217
+
Gly
GCC
[ENA]
¡û
>PHG0300110
EU826467
Myoviridae
Mycobacterium phage Rizal N4 (EU826467)
94888
94961
+
Gly
GCC
[ENA]
¡û
Identical group No.553391 (1 seq.)
>PHG0100515
EU826466
Myoviridae
Mycobacterium phage Myrna N4 (EU826466)
94110
94183
+
Gly
GCC
[ENA]
¡û
Identical group No.564472 (2 seq.)
>PHG0300115
EU826468
Myoviridae
Mycobacterium phage Spud N4 (EU826468)
96566
96639
+
Gly
GCC
[ENA]
¡û
>PHG0300120
EU826469
Myoviridae
Mycobacterium phage ScottMcG N4 (EU826469)
95450
95523
+
Gly
GCC
[ENA]
¡û
Identical group No.731965 (1 seq.)
>PHG181005613
MF403008
Myoviridae
Agrobacterium phage Atu_ph07 (MF403008)
303309
303235
-
Gly
GCC
[ENA]
¡û
Identical group No.744943 (1 seq.)
>PHG14100688
HQ615693
Myoviridae
Synechococcus phage S-CRM01 VH-P22 (HQ615693)
130519
130591
+
Gly
GCC
[ENA]
¡û
Identical group No.750761 (1 seq.)
>PHG181002128
KU682439
Myoviridae
Stenotrophomonas phage vB_SmaS-DLP_6 (KU682439)
104297
104371
+
Gly
GCC
[ENA]
¡û
Identical group No.802047 (1 seq.)
>PHG181005993
MF668280
Myoviridae
Mycobacterium phage Phabba (MF668280)
92582
92653
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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