This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Nanoarchaeota
Anticodon = GCG
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.255434 (3 seq.)
>A171005786
CP010514
Nanoarchaeota
Candidatus Nanopusillus acidilobi 7A [CP010514]
57966
57892
-
Arg
GCG
-
¡û
>WENV181228735
OFEH01002264
[OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA
871
945
+
Arg
GCG
[ENA]
¢þ
>WENV181407306
OGCG01015890
[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
78
4
-
Arg
GCG
[ENA]
¢þ
Identical group No.338070 (2 seq.)
>At2114
AE017199
Nanoarchaeota
Nanoarchaeum equitans Kin4-M [AE017199]
220492
220565
+
Arg
GCG
[Ensembl]
¡û
>W1610000085
AACL01000001
Nanoarchaeota
Nanoarchaeum equitans Kin4-M [AACL]
220491
220566
+
Arg
GCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK