tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CAC

HIT: 10 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.2218 (5 seq.)
>A171007073 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 415689 415596 - Val CAC -
>WENV180053775 MPLV02041513 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 287 381 + Val CAC [ENA]
>WENV170500879 CEVU01055343 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 427 332 - Val CAC [ENA]
>WENV170505393 CEVW01059493 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1301 1396 + Val CAC [ENA]
>WENV170617202 FUWD012917361 [FUWD] metagenome; unknown 847 942 + Val CAC [ENA]
Identical group No.3202 (1 seq.)
>A171006047 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 601098 601192 + Val CAC -
Identical group No.243729 (62 seq.)
>A171004113 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 761204 761128 - Val CAC -
>WENV014127 AACY020390991 Marine microbial communities from Global Ocean Sampling (GOS) 159 238 + Val CAC [ENA]
>WENV180045538 MOXS02139063 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 354 279 - Val CAC [ENA]
>WENV180045826 MPLT02020440 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 2407 2482 + Val CAC [ENA]
>WENV180046581 MPLT02110252 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 10077 10002 - Val CAC [ENA]
>WENV180048740 MPLU02004937 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 1666 1741 + Val CAC [ENA]
>WENV180051969 MPLU02258713 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 530 605 + Val CAC [ENA]
>WENV180053909 MPLV02053860 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 970 1045 + Val CAC [ENA]
>WENV180063107 MPLX02331239 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 11571 11496 - Val CAC [ENA]
>WENV180364665 OBOA01071843 [OBOA] marine metagenome; Deep Chlorophyll Maximum 421 345 - Val CAC [ENA]
>WENV181092790 OEBK01060972 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 209 285 + Val CAC [ENA]
>WENV183794401 PVBE010094530 [PVBE] marine metagenome; water 99 24 - Val CAC [ENA]
>WENV183801190 PVBE010651407 [PVBE] marine metagenome; water 2943 2868 - Val CAC [ENA]
>WENV183801950 PVBE010719889 [PVBE] marine metagenome; water 677 752 + Val CAC [ENA]
>WENV170143561 CENY01080598 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 223 148 - Val CAC [ENA]
>WENV170146375 CENZ01049440 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 127 203 + Val CAC [ENA]
>WENV170168572 CEOP01103834 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 281 357 + Val CAC [ENA]
>WENV170172090 CEOQ01092438 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 411 487 + Val CAC [ENA]
>WENV170172672 CEOQ01137285 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 480 402 - Val CAC [ENA]
>WENV170184415 CEOZ01091190 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1273 1348 + Val CAC [ENA]
>WENV170212696 CEPW01260686 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 329 404 + Val CAC [ENA]
>WENV170227859 CEQF01145718 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 760 685 - Val CAC [ENA]
>WENV170257443 CEQX01313757 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7 82 + Val CAC [ENA]
>WENV170258378 CEQY01060886 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 410 485 + Val CAC [ENA]
>WENV170286509 CERW01102442 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 477 553 + Val CAC [ENA]
>WENV170300263 CESG01109648 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7 82 + Val CAC [ENA]
>WENV170319730 CESQ01194100 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 647 572 - Val CAC [ENA]
>WENV170322763 CESR01166165 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1395 1470 + Val CAC [ENA]
>WENV170324129 CESS01052788 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 251 + Val CAC [ENA]
>WENV170364579 CETM01347847 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 124 200 + Val CAC [ENA]
>WENV170372279 CETS01079482 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 260 184 - Val CAC [ENA]
>WENV170404691 CEUG01021824 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 185 109 - Val CAC [ENA]
>WENV170408528 CEUI01034648 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 662 738 + Val CAC [ENA]
>WENV170410601 CEUJ01115913 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 257 182 - Val CAC [ENA]
>WENV170419063 CEUM01092605 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 257 182 - Val CAC [ENA]
>WENV170424216 CEUO01085610 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3013 3088 + Val CAC [ENA]
>WENV170432213 CEUS01075927 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1752 1677 - Val CAC [ENA]
>WENV170441763 CEUV01282291 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 836 911 + Val CAC [ENA]
>WENV170445514 CEUY01044113 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 986 1061 + Val CAC [ENA]
>WENV170445645 CEUY01054793 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1752 1677 - Val CAC [ENA]
>WENV170449728 CEUZ01074325 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1338 1263 - Val CAC [ENA]
>WENV170449742 CEUZ01075489 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 640 715 + Val CAC [ENA]
>WENV170450360 CEUZ01110749 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 257 182 - Val CAC [ENA]
>WENV170462366 CEVD01057818 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1754 1679 - Val CAC [ENA]
>WENV170463227 CEVD01123106 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 259 184 - Val CAC [ENA]
>WENV170482106 CEVM01006690 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1517 1442 - Val CAC [ENA]
>WENV170498498 CEVT01042498 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 577 653 + Val CAC [ENA]
>WENV170510817 CEVZ01031461 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 789 864 + Val CAC [ENA]
>WENV170518818 CEWE01165996 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 255 180 - Val CAC [ENA]
>WENV170532800 CEWO01070298 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 191 116 - Val CAC [ENA]
>WENV021040 AACY020561782 Marine microbial communities from Global Ocean Sampling (GOS) 3439 3518 + Val CAC [ENA]
>WENV170610200 FUWD011756250 [FUWD] metagenome; unknown 67 143 + Val CAC [ENA]
>WENV170621677 FUWD013068662 [FUWD] metagenome; unknown 962 1037 + Val CAC [ENA]
>WENV170629863 FUWD013284381 [FUWD] metagenome; unknown 962 1037 + Val CAC [ENA]
>WENV170750134 LUMG01000409 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 9101 9176 + Val CAC [ENA]
>WENV170761614 LUMV01003149 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 1653 1728 + Val CAC [ENA]
>WENV170908650 MDTE01067765 [MDTE] marine metagenome; seawater 3782 3706 - Val CAC [ENA]
>W1910647533 LXWN01000001 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 417503 417427 - Val CAC [ENA]
>WENV036250 AACY021761861 Marine microbial communities from Global Ocean Sampling (GOS) 255 176 - Val CAC [ENA]
>WENV041472 AACY022162149 Marine microbial communities from Global Ocean Sampling (GOS) 819 898 + Val CAC [ENA]
>WENV044576 AACY022434371 Marine microbial communities from Global Ocean Sampling (GOS) 330 409 + Val CAC [ENA]
>W1610597542 LFEZ01000012 Nitrososphaerota Thaumarchaeota archaeon casp-thauma4 [LFEZ] 3145 3221 + Val CAC [ENA]
Identical group No.244863 (1 seq.)
>A171006839 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 2004448 2004374 - Val CAC -
Identical group No.245931 (2 seq.)
>A171001901 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 1093808 1093883 + Val CAC -
>WENV180690243 OCZS010001168 [OCZS] soil metagenome; soil 2914 2989 + Val CAC [ENA]
Identical group No.253167 (3 seq.)
>A171006385 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 2028470 2028546 + Val CAC -
>WENV170984997 MWVW01008698 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 829 752 - Val CAC [ENA]
>WENV170992846 MWWB01108806 [MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil 117 40 - Val CAC [ENA]
Identical group No.256132 (3 seq.)
>A171004336 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 919468 919393 - Val CAC -
>W1910760390 MNFA01000001 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_4_48_7 [MNFA] 1306 1231 - Val CAC [ENA]
>W1910760417 MNFY01000219 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_3_50_5 [MNFY] 157 82 - Val CAC [ENA]
Identical group No.259869 (1 seq.)
>A171004259 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 2025797 2025720 - Val CAC -
Identical group No.261130 (2 seq.)
>A171007486 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 962883 962806 - Val CAC -
>W1910285436 FRFC01000004 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 147526 147600 + Val CAC [ENA]
Identical group No.641980 (1 seq.)
>At0080 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1103646 1103555 - Val CAC [Ensembl]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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