tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CAG

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.86985 (7 seq.)
>A171003411 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 40603 40688 + Leu CAG -
>A171006026 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1761985 1761899 - Leu CAG -
>WENV170701206 LKGT01004844 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 16787 16701 - Leu CAG [ENA]
>W1910126247 BGKI01000012 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 140885 140799 - Leu CAG [ENA]
>W1610005458 AJVJ01000044 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 40543 40628 + Leu CAG [ENA]
>W1610599354 LFLC01000055 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 7688 7774 + Leu CAG [ENA]
>W1610617247 LGTD01000273 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 539 625 + Leu CAG [ENA]
Identical group No.87800 (19 seq.)
>A171004093 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 92532 92618 + Leu CAG -
>WENV170153710 CEOF01123659 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 570 656 + Leu CAG [ENA]
>WENV170247152 CEQQ01019170 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 349 + Leu CAG [ENA]
>WENV170252750 CEQU01027326 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 16 102 + Leu CAG [ENA]
>WENV170256531 CEQX01098910 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1064 1150 + Leu CAG [ENA]
>WENV170267517 CERG01007415 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 349 + Leu CAG [ENA]
>WENV170272031 CERK01030835 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2880 2794 - Leu CAG [ENA]
>WENV170280545 CERR01154927 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 447 361 - Leu CAG [ENA]
>WENV170497896 CEVS01351115 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 824 738 - Leu CAG [ENA]
>WENV170498333 CEVT01027068 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 314 400 + Leu CAG [ENA]
>WENV170509215 CEVY01011284 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 102 - Leu CAG [ENA]
>WENV170515984 CEWB01070757 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 68 154 + Leu CAG [ENA]
>WENV021031 AACY020561678 Marine microbial communities from Global Ocean Sampling (GOS) 12272 12361 + Leu CAG [ENA]
>WENV170729840 LULG01002214 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 2619 2533 - Leu CAG [ENA]
>WENV170760955 LUMU01002224 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 836 750 - Leu CAG [ENA]
>WENV170826990 MDSY01120817 [MDSY] marine metagenome; seawater 3603 3517 - Leu CAG [ENA]
>WENV025437 AACY020888052 Marine microbial communities from Global Ocean Sampling (GOS) 341 430 + Leu CAG [ENA]
>W1910647536 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 252715 252801 + Leu CAG [ENA]
>W1610937786 LUPE01000055 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S43_B1 [LUPE] 836 750 - Leu CAG [ENA]
Identical group No.90723 (21 seq.)
>A171000227 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 88220 88306 + Leu CAG -
>A171003386 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 53131 53217 + Leu CAG -
>WENV183618214 OOFN01006220 [OOFN] marine metagenome; seawater 535 449 - Leu CAG [ENA]
>WENV170356290 CETJ01018980 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 401 + Leu CAG [ENA]
>WENV170475674 CEVI01022690 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 211 125 - Leu CAG [ENA]
>WENV170538005 CEWR01044792 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1939 2025 + Leu CAG [ENA]
>WENV170661079 JXWU01098581 [JXWU] soil metagenome; rice field; organic control Plot 379 465 + Leu CAG [ENA]
>WENV170701092 LKGT01002443 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 9814 9900 + Leu CAG [ENA]
>WENV170701364 LKGT01007833 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 8323 8237 - Leu CAG [ENA]
>W1910572966 JNVL01000016 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 16214 16300 + Leu CAG [ENA]
>W1910572978 JOKN01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 95900 95986 + Leu CAG [ENA]
>W1910573224 JOSY01000077 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 140408 140494 + Leu CAG [ENA]
>W1910573236 JOSZ01000014 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-P11 [JOSZ] 450 536 + Leu CAG [ENA]
>W1910573244 JOTA01000002 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 46053 45967 - Leu CAG [ENA]
>W1910573290 JOTD01000023 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 47 133 + Leu CAG [ENA]
>W1910573291 JOTD01000024 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 47 133 + Leu CAG [ENA]
>W1610000532 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 994096 994182 + Leu CAG [ENA]
>W1610003083 AEXL02000016 Nitrososphaerota Candidatus Nitrosopumilus salaria salaria BD31 [AEXL] 3589 3675 + Leu CAG [ENA]
>W1610005401 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 40532 40618 + Leu CAG [ENA]
>W1610005424 AJVJ01000014 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 40534 40620 + Leu CAG [ENA]
>W1610597515 LFEY01000007 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 84821 84907 + Leu CAG [ENA]
Identical group No.97115 (5 seq.)
>A171007480 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1631612 1631526 - Leu CAG -
>WENV183685376 ORMF010840291 [ORMF] groundwater metagenome; groundwater 479 565 + Leu CAG [ENA]
>W1910760462 MNGY01000101 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_2 [MNGY] 15804 15719 - Leu CAG [ENA]
>W1910760477 MNHP01000079 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_4 [MNHP] 696 610 - Leu CAG [ENA]
>W1910760502 MNJS01000035 Nitrososphaerota Thaumarchaeota archaeon 13_1_20CM_2_39_20 [MNJS] 15513 15428 - Leu CAG [ENA]
Identical group No.98576 (2 seq.)
>A171007052 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 85798 85883 + Leu CAG -
>WENV170616892 FUWD012907706 [FUWD] metagenome; unknown 2169 2083 - Leu CAG [ENA]
Identical group No.100674 (1 seq.)
>A171005931 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 122399 122313 - Leu CAG -
Identical group No.104463 (2 seq.)
>At0072 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1939286 1939370 + Leu CAG [Ensembl]
>ENV004157 DQ397567 Environmental sample from ENV division of INSDC 6909 6998 + Leu CAG [ENA]
Identical group No.110630 (1 seq.)
>A171006039 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 112983 113070 + Leu CAG -
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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