tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CCC

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242040 (2 seq.)
>A171006391 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 3387987 3387912 - Gly CCC -
>WENV170991480 MWWA01209578 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 221 296 + Gly CCC [ENA]
Identical group No.244861 (3 seq.)
>A171006831 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 943999 944075 + Gly CCC -
>WENV170998792 MWWJ01109202 [MWWJ] soil metagenome; CN-4 sample; Antarctic (ecotone) soil 280 206 - Gly CCC [ENA]
>WENV170999397 MWWK01045243 [MWWK] soil metagenome; BG12-3 sample; Antarctic (ecotone) soil 136 59 - Gly CCC [ENA]
Identical group No.245942 (7 seq.)
>A171001906 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 2741674 2741599 - Gly CCC -
>WENV180327224 OBKT01011663 [OBKT] soil metagenome; soil 221 147 - Gly CCC [ENA]
>WENV180690518 OCZS010009284 [OCZS] soil metagenome; soil 719 645 - Gly CCC [ENA]
>WENV180691907 OCZS010259848 [OCZS] soil metagenome; soil 541 615 + Gly CCC [ENA]
>WENV180692186 OCZS010394450 [OCZS] soil metagenome; soil 75 1 - Gly CCC [ENA]
>WENV170956967 MJUP01408925 [MJUP] soil metagenome; viral particles from soil sample MGM 264 339 + Gly CCC [ENA]
>WENV170985290 MWVW01057499 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 392 467 + Gly CCC [ENA]
Identical group No.259863 (1 seq.)
>A171004246 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 394839 394915 + Gly CCC -
Identical group No.271779 (18 seq.)
>A171003410 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 24630 24557 - Gly CCC -
>A171003435 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 12071 11998 - Gly CCC -
>A171005906 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 150923 150996 + Gly CCC -
>A171006025 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1790634 1790707 + Gly CCC -
>WENV170227560 CEQF01103270 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 233 160 - Gly CCC [ENA]
>WENV170301048 CESG01236135 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2120 2047 - Gly CCC [ENA]
>W1910126246 BGKI01000012 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 169397 169470 + Gly CCC [ENA]
>W1910572968 JNVL01000025 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 2026 1953 - Gly CCC [ENA]
>W1910572980 JOKN01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 66230 66157 - Gly CCC [ENA]
>W1910573226 JOSY01000077 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 112391 112318 - Gly CCC [ENA]
>W1910573233 JOSZ01000009 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-P11 [JOSZ] 16492 16565 + Gly CCC [ENA]
>W1910573286 JOTD01000018 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 22547 22474 - Gly CCC [ENA]
>W1910573287 JOTD01000019 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 2070 1997 - Gly CCC [ENA]
>W1610005406 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 12030 11954 - Gly CCC [ENA]
>W1610005426 AJVJ01000014 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 12033 11957 - Gly CCC [ENA]
>W1610005460 AJVJ01000044 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 12011 11938 - Gly CCC [ENA]
>W1610599349 LFLC01000032 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 43829 43756 - Gly CCC [ENA]
>W1610617245 LGTD01000242 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 1004 931 - Gly CCC [ENA]
Identical group No.332618 (29 seq.)
>A171007081 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 60573 60500 - Gly CCC -
>WENV180054641 MPLV02104473 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 900 827 - Gly CCC [ENA]
>WENV180062159 MPLX02268585 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1013 940 - Gly CCC [ENA]
>WENV180360303 OBNT01049947 [OBNT] marine metagenome; Sea Water 414 341 - Gly CCC [ENA]
>WENV181092383 OEBK01000084 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1492 1419 - Gly CCC [ENA]
>WENV183805534 PVBE011029452 [PVBE] marine metagenome; water 3132 3059 - Gly CCC [ENA]
>WENV170113637 CENF01088531 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1481 1554 + Gly CCC [ENA]
>WENV170122700 CENN01168553 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 109 36 - Gly CCC [ENA]
>WENV170154371 CEOF01196583 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2417 2490 + Gly CCC [ENA]
>WENV170238620 CEQM01193978 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 467 394 - Gly CCC [ENA]
>WENV170241404 CEQN01243418 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 349 276 - Gly CCC [ENA]
>WENV170243686 CEQO01180127 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 21 94 + Gly CCC [ENA]
>WENV170272303 CERK01063945 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 64 137 + Gly CCC [ENA]
>WENV170321703 CESR01072953 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7413 7340 - Gly CCC [ENA]
>WENV170324623 CESS01095346 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1224 1151 - Gly CCC [ENA]
>WENV170474461 CEVH01141740 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 465 538 + Gly CCC [ENA]
>WENV170481733 CEVL01328191 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 4 - Gly CCC [ENA]
>WENV170503073 CEVV01050009 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2003 1930 - Gly CCC [ENA]
>WENV170507318 CEVX01036358 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6723 6796 + Gly CCC [ENA]
>WENV170532796 CEWO01070097 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 239 166 - Gly CCC [ENA]
>WENV170599303 FUWD010071186 [FUWD] metagenome; unknown 238 165 - Gly CCC [ENA]
>WENV170616799 FUWD012903450 [FUWD] metagenome; unknown 136 209 + Gly CCC [ENA]
>WENV170617083 FUWD012913624 [FUWD] metagenome; unknown 105 32 - Gly CCC [ENA]
>WENV170619790 FUWD013021381 [FUWD] metagenome; unknown 1553 1480 - Gly CCC [ENA]
>WENV170750115 LUMG01000334 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 12248 12175 - Gly CCC [ENA]
>WENV170750425 LUMG01010972 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 5 78 + Gly CCC [ENA]
>WENV170756528 LUMP01000070 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 11648 11721 + Gly CCC [ENA]
>WENV056993 AACY023278704 Marine microbial communities from Global Ocean Sampling (GOS) 745 669 - Gly CCC [ENA]
>W1610855508 LQMW01000008 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 102570 102497 - Gly CCC [ENA]
Identical group No.349511 (2 seq.)
>A171000254 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 59676 59603 - Gly CCC -
>W1610000544 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 965552 965479 - Gly CCC [ENA]
Identical group No.398585 (4 seq.)
>At0092 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1898649 1898576 - Gly CCC [Ensembl]
>ENV004153 DQ397560 Environmental sample from ENV division of INSDC 27469 27545 + Gly CCC [ENA]
>ENV004165 DQ397574 Environmental sample from ENV division of INSDC 17020 17096 + Gly CCC [ENA]
>ENV004208 DQ397830 Environmental sample from ENV division of INSDC 16950 16874 - Gly CCC [ENA]
Identical group No.399301 (1 seq.)
>A171007491 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 91499 91426 - Gly CCC -
Identical group No.440186 (3 seq.)
>A171006064 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 85117 85044 - Gly CCC -
>W1910285418 FRFC01000001 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 228960 229034 + Gly CCC [ENA]
>W1610083099 CBTY010000011 Nitrososphaerota Candidatus Nitrosotenuis uzonensis N4 [CBTY] 59498 59572 + Gly CCC [ENA]
Identical group No.761505 (1 seq.)
>A171004328 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 1552056 1552127 + Gly CCC -
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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