tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CGT

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281142 (43 seq.)
>A171007053 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 266346 266420 + Thr CGT -
>WENV180053650 MPLV02032368 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 843 770 - Thr CGT [ENA]
>WENV180054892 MPLV02119855 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 4592 4519 - Thr CGT [ENA]
>WENV180115444 OAPT01002037 [OAPT] marine metagenome; seawater 35 108 + Thr CGT [ENA]
>WENV180595138 OCPB01024942 [OCPB] marine metagenome; ENVO:00002149 306 232 - Thr CGT [ENA]
>WENV181092581 OEBK01010790 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 315 242 - Thr CGT [ENA]
>WENV181318642 OFKA01003798 [OFKA] marine metagenome; seawater 780 853 + Thr CGT [ENA]
>WENV181323267 OFKX01002678 [OFKX] marine metagenome; seawater 319 392 + Thr CGT [ENA]
>WENV183797030 PVBE010298800 [PVBE] marine metagenome; water 6243 6316 + Thr CGT [ENA]
>WENV170113560 CENF01081046 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1485 1558 + Thr CGT [ENA]
>WENV170145704 CENZ01005377 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2082 2155 + Thr CGT [ENA]
>WENV170154602 CEOF01210774 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2754 2827 + Thr CGT [ENA]
>WENV170168046 CEOP01056557 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 608 535 - Thr CGT [ENA]
>WENV170272219 CERK01054625 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1594 1667 + Thr CGT [ENA]
>WENV170286142 CERW01057448 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 127 - Thr CGT [ENA]
>WENV170325141 CESS01200172 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 388 + Thr CGT [ENA]
>WENV170475618 CEVI01017676 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 879 952 + Thr CGT [ENA]
>WENV170493342 CEVQ01355708 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2646 2573 - Thr CGT [ENA]
>WENV170502531 CEVV01002948 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1262 1189 - Thr CGT [ENA]
>WENV170505214 CEVW01039043 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1557 1630 + Thr CGT [ENA]
>WENV170507475 CEVX01056184 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1270 1197 - Thr CGT [ENA]
>WENV170532552 CEWO01050569 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 607 533 - Thr CGT [ENA]
>WENV170532749 CEWO01066493 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 764 690 - Thr CGT [ENA]
>WENV170599065 FUWD010060939 [FUWD] metagenome; unknown 218 291 + Thr CGT [ENA]
>WENV170599069 FUWD010060993 [FUWD] metagenome; unknown 269 342 + Thr CGT [ENA]
>WENV170599134 FUWD010064337 [FUWD] metagenome; unknown 448 522 + Thr CGT [ENA]
>WENV170616805 FUWD012903613 [FUWD] metagenome; unknown 766 692 - Thr CGT [ENA]
>WENV170616806 FUWD012903614 [FUWD] metagenome; unknown 252 178 - Thr CGT [ENA]
>WENV170617361 FUWD012923482 [FUWD] metagenome; unknown 2999 2926 - Thr CGT [ENA]
>WENV170620062 FUWD013025108 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA]
>WENV170620075 FUWD013025380 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA]
>WENV170628191 FUWD013243045 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA]
>WENV170628202 FUWD013243285 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA]
>WENV170750173 LUMG01000699 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 3365 3292 - Thr CGT [ENA]
>WENV170756713 LUMP01000638 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 13618 13545 - Thr CGT [ENA]
>WENV170764651 LWDU01032905 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 5106 5179 + Thr CGT [ENA]
>WENV170804101 MDSW01041398 [MDSW] marine metagenome; seawater 392 318 - Thr CGT [ENA]
>WENV170806795 MDSW01087088 [MDSW] marine metagenome; seawater 1053 979 - Thr CGT [ENA]
>WENV170808070 MDSW01108658 [MDSW] marine metagenome; seawater 491 418 - Thr CGT [ENA]
>WENV170914544 MDTE01149893 [MDTE] marine metagenome; seawater 1737 1664 - Thr CGT [ENA]
>WENV11101377 AGBE01002111 Marine metagenome, Gulf of Maine surface waters 14746 14672 - Thr CGT [ENA]
>WENV006241 AACY020170643 Marine microbial communities from Global Ocean Sampling (GOS) 17 93 + Thr CGT [ENA]
>W1610855518 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 168317 168244 - Thr CGT [ENA]
Identical group No.299624 (8 seq.)
>A173000362 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1486211 1486138 - Thr CGT -
>W1930005180 FRFC01000003 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 414963 415036 + Thr CGT [ENA]
>W1930018041 MNED01000045 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_38_12 [MNED] 18379 18452 + Thr CGT [ENA]
>W1930018058 MNFB01000058 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_4_38_7 [MNFB] 9942 10015 + Thr CGT [ENA]
>W1930018069 MNFZ01000029 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_3_38_6 [MNFZ] 10285 10358 + Thr CGT [ENA]
>W1930018079 MNGX01000169 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_7 [MNGX] 24171 24098 - Thr CGT [ENA]
>W1930018085 MNGZ01000020 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_1 [MNGZ] 1696 1623 - Thr CGT [ENA]
>W1930018099 MNJS01000045 Nitrososphaerota Thaumarchaeota archaeon 13_1_20CM_2_39_20 [MNJS] 2406 2333 - Thr CGT [ENA]
Identical group No.301565 (10 seq.)
>A171000246 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 1317848 1317774 - Thr CGT -
>A171003402 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 1313672 1313599 - Thr CGT -
>W1910572970 JNVL01000027 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 9294 9221 - Thr CGT [ENA]
>W1910572990 JOKN01000019 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 8292 8219 - Thr CGT [ENA]
>W1910573220 JOSY01000057 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 3519 3446 - Thr CGT [ENA]
>W1910573232 JOSZ01000006 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-P11 [JOSZ] 101608 101535 - Thr CGT [ENA]
>W1910573312 JOTD01000069 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 3555 3482 - Thr CGT [ENA]
>W1610000547 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 578464 578388 - Thr CGT [ENA]
>W1610005400 AJVI01000004 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 29822 29749 - Thr CGT [ENA]
>W1610005420 AJVJ01000008 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 29827 29754 - Thr CGT [ENA]
Identical group No.301905 (1 seq.)
>A171006830 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 140081 140154 + Thr CGT -
Identical group No.321750 (2 seq.)
>A173000125 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 1334202 1334129 - Thr CGT -
>W1630000386 AJVJ01000050 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 6396 6469 + Thr CGT [ENA]
Identical group No.372251 (3 seq.)
>A171006015 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 374930 375003 + Thr CGT -
>W1910126238 BGKI01000006 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 34707 34634 - Thr CGT [ENA]
>W1610617266 LGTD01001056 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 2175 2248 + Thr CGT [ENA]
Identical group No.372641 (1 seq.)
>A171005923 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 1653765 1653692 - Thr CGT -
Identical group No.380285 (4 seq.)
>A171004099 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 286239 286312 + Thr CGT -
>WENV170271901 CERK01018003 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1225 1298 + Thr CGT [ENA]
>WENV170489080 CEVP01043215 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 468 395 - Thr CGT [ENA]
>W1910647542 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 447326 447399 + Thr CGT [ENA]
Identical group No.391920 (2 seq.)
>A173000184 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 2445149 2445222 + Thr CGT -
>A173000195 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 1306793 1306866 + Thr CGT -
Identical group No.393834 (4 seq.)
>A171006398 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 555434 555361 - Thr CGT -
>WENV180039009 LLBY010019262 [LLBY] soil metagenome; soil from tomato rhizosphere 25072 24999 - Thr CGT [ENA]
>WENV180040764 LLBZ010013026 [LLBZ] soil metagenome; soil from tomato rhizosphere 25072 24999 - Thr CGT [ENA]
>WENV180041968 LLBZ010828662 [LLBZ] soil metagenome; soil from tomato rhizosphere 486 413 - Thr CGT [ENA]
Identical group No.398583 (10 seq.)
>At0065 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1120854 1120930 + Thr CGT [Ensembl]
>ENV004150 DQ397557 Environmental sample from ENV division of INSDC 10008 10084 + Thr CGT [ENA]
>ENV004191 DQ397620 Environmental sample from ENV division of INSDC 32864 32788 - Thr CGT [ENA]
>ENV004193 DQ397624 Environmental sample from ENV division of INSDC 8552 8476 - Thr CGT [ENA]
>ENV004205 DQ397640 Environmental sample from ENV division of INSDC 29777 29701 - Thr CGT [ENA]
>ENV004209 DQ397831 Environmental sample from ENV division of INSDC 5113 5189 + Thr CGT [ENA]
>ENV004212 DQ397833 Environmental sample from ENV division of INSDC 37638 37562 - Thr CGT [ENA]
>ENV004217 DQ397843 Environmental sample from ENV division of INSDC 7034 7110 + Thr CGT [ENA]
>ENV004223 DQ397846 Environmental sample from ENV division of INSDC 10273 10197 - Thr CGT [ENA]
>ENV004231 DQ397855 Environmental sample from ENV division of INSDC 23379 23303 - Thr CGT [ENA]
Identical group No.415946 (1 seq.)
>A173000057 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 345764 345837 + Thr CGT -
Identical group No.440184 (1 seq.)
>A171006045 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 417833 417906 + Thr CGT -
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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