tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CTT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.271180 (10 seq.)
>A173000112 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 135957 136031 + Lys CTT - ¡û
>A173000119 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 75444 75518 + Lys CTT - ¡û
>A173000262 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1685781 1685707 - Lys CTT - ¡û
>W1930002157 BGKI01000012 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 58898 58824 - Lys CTT [ENA] ¡û
>W1630000191 AEXL02000055 Nitrososphaerota Candidatus Nitrosopumilus salaria salaria BD31 [AEXL] 1536 1462 - Lys CTT [ENA] ¡û
>W1630000367 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 123650 123726 + Lys CTT [ENA] ¡û
>W1630000374 AJVJ01000015 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 74356 74432 + Lys CTT [ENA] ¡û
>W1630000382 AJVJ01000045 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 25232 25306 + Lys CTT [ENA] ¡û
>W1630010290 LFLC01000025 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 197919 197843 - Lys CTT [ENA] ¡û
>W1630010755 LGTD01000371 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 612 686 + Lys CTT [ENA] ¡û
Identical group No.295204 (33 seq.)
>A171004094 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 190531 190605 + Lys CTT - ¡û
>WENV180046179 MPLT02063223 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 14525 14451 - Lys CTT [ENA] ¢þ
>WENV180048935 MPLU02021554 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2997 3071 + Lys CTT [ENA] ¢þ
>WENV180053267 MPLV02005149 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 13518 13444 - Lys CTT [ENA] ¢þ
>WENV180057060 MPLW02077398 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 456 382 - Lys CTT [ENA] ¢þ
>WENV180057676 MPLX02017763 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 6115 6189 + Lys CTT [ENA] ¢þ
>WENV180093206 MPMF02306908 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 4 78 + Lys CTT [ENA] ¢þ
>WENV183802159 PVBE010735731 [PVBE] marine metagenome; water 776 850 + Lys CTT [ENA] ¢þ
>WENV170227472 CEQF01090748 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 326 400 + Lys CTT [ENA] ¢þ
>WENV170244475 CEQP01024904 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 201 + Lys CTT [ENA] ¢þ
>WENV170256960 CEQX01145802 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1145 1221 + Lys CTT [ENA] ¢þ
>WENV170260010 CEQY01357118 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 577 501 - Lys CTT [ENA] ¢þ
>WENV170262677 CERB01300050 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 770 694 - Lys CTT [ENA] ¢þ
>WENV170267667 CERG01016959 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 917 991 + Lys CTT [ENA] ¢þ
>WENV170279608 CERR01039651 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 1 - Lys CTT [ENA] ¢þ
>WENV170286305 CERW01079033 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 511 587 + Lys CTT [ENA] ¢þ
>WENV170287215 CERX01006194 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 97 173 + Lys CTT [ENA] ¢þ
>WENV170318909 CESQ01092344 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 96 - Lys CTT [ENA] ¢þ
>WENV170433071 CEUS01143214 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1895 1821 - Lys CTT [ENA] ¢þ
>WENV170445591 CEUY01048870 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 202 278 + Lys CTT [ENA] ¢þ
>WENV170451077 CEUZ01160254 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 266 + Lys CTT [ENA] ¢þ
>WENV170461418 CEVD01002966 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1291 1215 - Lys CTT [ENA] ¢þ
>WENV170480149 CEVL01068503 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 128 203 + Lys CTT [ENA] ¢þ
>WENV170497857 CEVS01330688 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 358 434 + Lys CTT [ENA] ¢þ
>WENV170505343 CEVW01052867 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 201 + Lys CTT [ENA] ¢þ
>WENV170625529 FUWD013199831 [FUWD] metagenome; unknown 910 834 - Lys CTT [ENA] ¢þ
>WENV170789993 MDSV01058898 [MDSV] marine metagenome; seawater 8575 8500 - Lys CTT [ENA] ¢þ
>WENV170797120 MDSV01175424 [MDSV] marine metagenome; seawater 3682 3606 - Lys CTT [ENA] ¢þ
>WENV170807271 MDSW01095891 [MDSW] marine metagenome; seawater 3857 3782 - Lys CTT [ENA] ¢þ
>WENV170815056 MDSX01004089 [MDSX] marine metagenome; seawater 7917 7842 - Lys CTT [ENA] ¢þ
>WENV170819086 MDSX01085401 [MDSX] marine metagenome; seawater 3199 3125 - Lys CTT [ENA] ¢þ
>W1910647537 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 350714 350788 + Lys CTT [ENA] ¡û
>WENV052760 AACY023047210 Marine microbial communities from Global Ocean Sampling (GOS) 456 534 + Lys CTT [ENA]
Identical group No.349510 (9 seq.)
>A171000228 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 171008 171082 + Lys CTT - ¡û
>A171005908 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 451449 451523 + Lys CTT - ¡û
>W1910572956 JNVL01000002 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 40577 40651 + Lys CTT [ENA] ¡û
>W1910573203 JOSY01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 9545 9619 + Lys CTT [ENA] ¡û
>W1910573245 JOTA01000003 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 29525 29599 + Lys CTT [ENA] ¡û
>W1910573292 JOTD01000032 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 4401 4475 + Lys CTT [ENA] ¡û
>WENV045647 AACY022537594 Marine microbial communities from Global Ocean Sampling (GOS) 320 242 - Lys CTT [ENA]
>W1610000533 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1076884 1076960 + Lys CTT [ENA] ¡û
>WENV069045 AACY023749877 Marine microbial communities from Global Ocean Sampling (GOS) 786 864 + Lys CTT [ENA]
Identical group No.360691 (3 seq.)
>A173000342 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1204993 1204919 - Lys CTT - ¡û
>W1630011055 LIAL01000104 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 2828 2902 + Lys CTT [ENA] ¡û
>W1630016215 LQMW01000024 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 26486 26412 - Lys CTT [ENA] ¡û
Identical group No.391926 (4 seq.)
>A179000471 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 846997 847092 + Lys CTT - ¡û
>A179000495 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 2318357 2318452 + Lys CTT - ¡û
>A175000161 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 846997 847093 + Lys CTT - ¡û
>A175000167 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 2318357 2318453 + Lys CTT - ¡û
Identical group No.398587 (4 seq.)
>At0073 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1957399 1957472 + Lys CTT [Ensembl] ¡û
>ENV004158 DQ397567 Environmental sample from ENV division of INSDC 25022 25100 + Lys CTT [ENA]
>ENV004178 DQ397593 Environmental sample from ENV division of INSDC 34669 34591 - Lys CTT [ENA]
>ENV004215 DQ397840 Environmental sample from ENV division of INSDC 12704 12782 + Lys CTT [ENA]
Identical group No.399313 (1 seq.)
>A178000736 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 163336 163425 + Lys CTT - ¡û
Identical group No.440190 (1 seq.)
>A178000555 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 196639 196728 + Lys CTT - ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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