tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = GCT

HIT: 10 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.114915 (28 seq.)
>A171006016 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 420588 420674 + Ser GCT -
>A171007054 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 311084 311170 + Ser GCT -
>WENV016601 AACY020466347 Marine microbial communities from Global Ocean Sampling (GOS) 1093 1181 + Ser GCT [ENA]
>WENV180049104 MPLU02034458 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 105 19 - Ser GCT [ENA]
>WENV180049351 MPLU02053111 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2471 2385 - Ser GCT [ENA]
>WENV180059426 MPLX02112039 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 696 782 + Ser GCT [ENA]
>WENV180115458 OAPT01002675 [OAPT] marine metagenome; seawater 980 1066 + Ser GCT [ENA]
>WENV180363360 OBNY01031797 [OBNY] marine metagenome; ENVO:00002010 161 75 - Ser GCT [ENA]
>WENV180595103 OCPB01017495 [OCPB] marine metagenome; ENVO:00002149 130 44 - Ser GCT [ENA]
>WENV181092382 OEBK01000073 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1066 1152 + Ser GCT [ENA]
>WENV183800693 PVBE010609917 [PVBE] marine metagenome; water 4456 4370 - Ser GCT [ENA]
>WENV170115109 CENF01407728 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 794 708 - Ser GCT [ENA]
>WENV170148483 CENZ01379621 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 829 915 + Ser GCT [ENA]
>WENV170155143 CEOF01439098 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 666 580 - Ser GCT [ENA]
>WENV170170218 CEOP01412117 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 478 564 + Ser GCT [ENA]
>WENV170272047 CERK01033285 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 543 457 - Ser GCT [ENA]
>WENV170286065 CERW01048314 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1956 2042 + Ser GCT [ENA]
>WENV170325144 CESS01200659 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1284 1370 + Ser GCT [ENA]
>WENV170480340 CEVL01090733 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 232 146 - Ser GCT [ENA]
>WENV170502855 CEVV01029904 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4793 4879 + Ser GCT [ENA]
>WENV170505929 CEVW01117860 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 286 372 + Ser GCT [ENA]
>WENV170507190 CEVX01024439 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2576 2490 - Ser GCT [ENA]
>WENV170617397 FUWD012924745 [FUWD] metagenome; unknown 420 334 - Ser GCT [ENA]
>WENV170750166 LUMG01000645 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 484 570 + Ser GCT [ENA]
>WENV170756657 LUMP01000419 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 5052 5138 + Ser GCT [ENA]
>WENV170944743 MDUO01002362 [MDUO] marine metagenome; 30 m water sample from station 6 1296 1382 + Ser GCT [ENA]
>W1610617244 LGTD01000180 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 4064 3978 - Ser GCT [ENA]
>W1610855519 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 123814 123728 - Ser GCT [ENA]
Identical group No.117469 (41 seq.)
>A171004100 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 345528 345614 + Ser GCT -
>WENV180049794 MPLU02085066 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 564 478 - Ser GCT [ENA]
>WENV170123620 CENO01060027 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3576 3490 - Ser GCT [ENA]
>WENV170157301 CEOJ01050483 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1993 2079 + Ser GCT [ENA]
>WENV170189386 CEPB01205918 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 757 843 + Ser GCT [ENA]
>WENV170189785 CEPC01031382 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 704 618 - Ser GCT [ENA]
>WENV170252941 CEQU01039393 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 232 146 - Ser GCT [ENA]
>WENV170255606 CEQX01008640 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5318 5232 - Ser GCT [ENA]
>WENV170271712 CERK01001185 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1187 1101 - Ser GCT [ENA]
>WENV170323204 CESR01304670 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 481 567 + Ser GCT [ENA]
>WENV170410735 CEUJ01129515 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 233 319 + Ser GCT [ENA]
>WENV170419260 CEUM01112374 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2225 2139 - Ser GCT [ENA]
>WENV170467862 CEVE01288789 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1507 1421 - Ser GCT [ENA]
>WENV170469198 CEVF01093490 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 497 411 - Ser GCT [ENA]
>WENV170488998 CEVP01035050 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 121 207 + Ser GCT [ENA]
>WENV170495885 CEVS01005920 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 214 128 - Ser GCT [ENA]
>WENV170498777 CEVT01071754 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 166 80 - Ser GCT [ENA]
>WENV170729966 LULG01005227 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 996 1082 + Ser GCT [ENA]
>WENV170730787 LULH01004426 [LULH] marine metagenome; Red Sea water column Station 169 - depth 100m 208 294 + Ser GCT [ENA]
>WENV170736352 LULM01001445 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 1162 1076 - Ser GCT [ENA]
>WENV170736979 LULN01000450 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 8533 8619 + Ser GCT [ENA]
>WENV170741597 LULT01000230 [LULT] marine metagenome; Red Sea water column Station 108 - depth 100m 364 450 + Ser GCT [ENA]
>WENV170746075 LULZ01007133 [LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m 393 479 + Ser GCT [ENA]
>WENV170747676 LUMD01000011 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 191 277 + Ser GCT [ENA]
>WENV170748564 LUME01000007 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 94364 94278 - Ser GCT [ENA]
>WENV170751044 LUMH01013551 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 208 122 - Ser GCT [ENA]
>WENV170753958 LUMK01020552 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 217 303 + Ser GCT [ENA]
>WENV170754210 LUML01000829 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 2521 2607 + Ser GCT [ENA]
>WENV170756668 LUMP01000449 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 7449 7535 + Ser GCT [ENA]
>WENV170759308 LUMS01011008 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 764 678 - Ser GCT [ENA]
>WENV170760828 LUMU01000435 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 3626 3540 - Ser GCT [ENA]
>WENV170761424 LUMV01000317 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 7172 7258 + Ser GCT [ENA]
>W1910647543 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 506615 506701 + Ser GCT [ENA]
>WENV026164 AACY020945108 Marine microbial communities from Global Ocean Sampling (GOS) 708 794 + Ser GCT [ENA]
>WENV027025 AACY021013479 Marine microbial communities from Global Ocean Sampling (GOS) 328 242 - Ser GCT [ENA]
>WENV053018 AACY023068598 Marine microbial communities from Global Ocean Sampling (GOS) 145 231 + Ser GCT [ENA]
>WENV076023 AACY024069908 Marine microbial communities from Global Ocean Sampling (GOS) 198 112 - Ser GCT [ENA]
>W1610937674 LUOZ01000035 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S25_B3 [LUOZ] 364 450 + Ser GCT [ENA]
>W1610937730 LUPB01000072 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S31_B2 [LUPB] 8414 8500 + Ser GCT [ENA]
>W1610937756 LUPD01000018 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S37_B6 [LUPD] 208 294 + Ser GCT [ENA]
>W1610937795 LUPE01000099 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S43_B1 [LUPE] 3626 3540 - Ser GCT [ENA]
Identical group No.118563 (12 seq.)
>A171000247 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 1263222 1263136 - Ser GCT -
>A171003403 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 1274519 1274433 - Ser GCT -
>A171005924 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 1604818 1604732 - Ser GCT -
>W1910572977 JNVL01000058 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 1965 2051 + Ser GCT [ENA]
>W1910572986 JOKN01000010 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 17544 17458 - Ser GCT [ENA]
>W1910573218 JOSY01000055 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 3743 3657 - Ser GCT [ENA]
>W1910573255 JOTA01000018 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 11783 11869 + Ser GCT [ENA]
>W1910573311 JOTD01000068 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 3787 3701 - Ser GCT [ENA]
>WENV027855 AACY021077482 Marine microbial communities from Global Ocean Sampling (GOS) 482 394 - Ser GCT [ENA]
>W1610000548 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 523838 523752 - Ser GCT [ENA]
>W1610005416 AJVI01000013 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 15198 15112 - Ser GCT [ENA]
>W1610005444 AJVJ01000031 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 75712 75626 - Ser GCT [ENA]
Identical group No.118645 (3 seq.)
>A171006387 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 2445084 2445168 + Ser GCT -
>A171006841 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1568831 1568747 - Ser GCT -
>WENV180583981 OCNM01002349 [OCNM] soil metagenome; soil 410 494 + Ser GCT [ENA]
Identical group No.123208 (2 seq.)
>A171003426 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 1262176 1262090 - Ser GCT -
>W1610005466 AJVJ01000051 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 11815 11901 + Ser GCT [ENA]
Identical group No.129329 (10 seq.)
>A171007484 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1432247 1432163 - Ser GCT -
>WENV180254003 OBEQ010593546 [OBEQ] groundwater metagenome; groundwater 284 370 + Ser GCT [ENA]
>WENV180254120 OBEQ010603686 [OBEQ] groundwater metagenome; groundwater 9042 9128 + Ser GCT [ENA]
>WENV180255863 OBEQ010762701 [OBEQ] groundwater metagenome; groundwater 5313 5397 + Ser GCT [ENA]
>WENV180257206 OBEQ010890630 [OBEQ] groundwater metagenome; groundwater 637 721 + Ser GCT [ENA]
>WENV180351394 OBLQ010051732 [OBLQ] soil metagenome; soil 449 533 + Ser GCT [ENA]
>WENV180584448 OCOJ01043000 [OCOJ] soil metagenome; soil 498 583 + Ser GCT [ENA]
>W1910285429 FRFC01000003 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 474022 474106 + Ser GCT [ENA]
>W1910760459 MNGY01000053 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_2 [MNGY] 2559 2475 - Ser GCT [ENA]
>W1910760505 MNJS01000041 Nitrososphaerota Thaumarchaeota archaeon 13_1_20CM_2_39_20 [MNJS] 2725 2641 - Ser GCT [ENA]
Identical group No.134668 (4 seq.)
>A171001908 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 2282636 2282552 - Ser GCT -
>W1910760386 MNEV01000009 Nitrososphaerota Candidatus Nitrososphaera sp. 13_1_40CM_48_12 [MNEV] 7955 8041 + Ser GCT [ENA]
>W1910760395 MNFA01000055 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_4_48_7 [MNFA] 3917 3831 - Ser GCT [ENA]
>W1910760416 MNFY01000202 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_3_50_5 [MNFY] 3734 3648 - Ser GCT [ENA]
Identical group No.139390 (2 seq.)
>A171004251 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 1058272 1058358 + Ser GCT -
>A171004331 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 2486496 2486582 + Ser GCT -
Identical group No.140905 (3 seq.)
>At0052 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 40040 40126 + Ser GCT [Ensembl]
>ENV004172 DQ397586 Environmental sample from ENV division of INSDC 26822 26734 - Ser GCT [ENA]
>ENV004182 DQ397601 Environmental sample from ENV division of INSDC 3720 3632 - Ser GCT [ENA]
Identical group No.146734 (3 seq.)
>A171006046 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 465671 465755 + Ser GCT -
>W1610027677 AVSQ01000021 Nitrososphaerota Candidatus Nitrosotenuis chungbukensis MY2 [AVSQ] 109090 109004 - Ser GCT [ENA]
>W1610083096 CBTY010000009 Nitrososphaerota Candidatus Nitrosotenuis uzonensis N4 [CBTY] 192655 192569 - Ser GCT [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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