tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = TCG

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242071 (51 seq.)
>A171007060 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1213203 1213277 + Arg TCG -
>WENV016505 AACY020464877 Marine microbial communities from Global Ocean Sampling (GOS) 1039 1116 + Arg TCG [ENA]
>WENV180052337 MPLU02289385 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 716 790 + Arg TCG [ENA]
>WENV180055449 MPLV02160739 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 452 378 - Arg TCG [ENA]
>WENV180356885 OBNL01063840 [OBNL] marine metagenome; ENVO:00002010 271 197 - Arg TCG [ENA]
>WENV180590485 OCOT01037366 [OCOT] marine metagenome; ENVO:00002010 133 59 - Arg TCG [ENA]
>WENV181092389 OEBK01000130 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 466 540 + Arg TCG [ENA]
>WENV181315604 OFJP01009719 [OFJP] marine metagenome; seawater 275 349 + Arg TCG [ENA]
>WENV181320716 OFKI01010501 [OFKI] marine metagenome; seawater 82 8 - Arg TCG [ENA]
>WENV181321774 OFKN01006709 [OFKN] marine metagenome; seawater 221 147 - Arg TCG [ENA]
>WENV182560400 OJDU01000485 [OJDU] seawater metagenome; Sea water 866 792 - Arg TCG [ENA]
>WENV183621945 OOFV01001036 [OOFV] marine metagenome; seawater 2339 2265 - Arg TCG [ENA]
>WENV183626576 OOGJ01000299 [OOGJ] marine metagenome; seawater 1116 1190 + Arg TCG [ENA]
>WENV183630267 OOGS01000600 [OOGS] marine metagenome; seawater 574 648 + Arg TCG [ENA]
>WENV183793476 PVBE010015285 [PVBE] marine metagenome; water 4998 5072 + Arg TCG [ENA]
>WENV170112996 CENF01026174 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 452 378 - Arg TCG [ENA]
>WENV170147268 CENZ01127277 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1556 1630 + Arg TCG [ENA]
>WENV170154682 CEOF01213424 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2786 2712 - Arg TCG [ENA]
>WENV170227822 CEQF01140414 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 186 260 + Arg TCG [ENA]
>WENV170297689 CESE01272270 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 492 418 - Arg TCG [ENA]
>WENV170325092 CESS01197041 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 566 640 + Arg TCG [ENA]
>WENV170475285 CEVH01316928 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 341 415 + Arg TCG [ENA]
>WENV170478953 CEVK01108387 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 245 319 + Arg TCG [ENA]
>WENV170492973 CEVQ01287859 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 234 - Arg TCG [ENA]
>WENV170502739 CEVV01020291 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 452 378 - Arg TCG [ENA]
>WENV170506933 CEVX01004559 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 276 - Arg TCG [ENA]
>WENV170535366 CEWP01051949 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 672 746 + Arg TCG [ENA]
>WENV170572303 FLOH01000716 [FLOH] marine metagenome; water 44664 44590 - Arg TCG [ENA]
>WENV170599739 FUWD010089492 [FUWD] metagenome; unknown 239 313 + Arg TCG [ENA]
>WENV170616945 FUWD012909468 [FUWD] metagenome; unknown 448 522 + Arg TCG [ENA]
>WENV170616946 FUWD012909469 [FUWD] metagenome; unknown 217 291 + Arg TCG [ENA]
>WENV170616977 FUWD012911458 [FUWD] metagenome; unknown 996 922 - Arg TCG [ENA]
>WENV170620010 FUWD013024487 [FUWD] metagenome; unknown 192 266 + Arg TCG [ENA]
>WENV170620094 FUWD013025650 [FUWD] metagenome; unknown 2087 2013 - Arg TCG [ENA]
>WENV170628144 FUWD013242468 [FUWD] metagenome; unknown 192 266 + Arg TCG [ENA]
>WENV170628210 FUWD013243418 [FUWD] metagenome; unknown 5836 5762 - Arg TCG [ENA]
>WENV170750075 LUMG01000129 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 12976 13050 + Arg TCG [ENA]
>WENV170756566 LUMP01000129 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 3989 3915 - Arg TCG [ENA]
>WENV170764647 LWDU01032814 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 707 633 - Arg TCG [ENA]
>WENV170912926 MDTE01127629 [MDTE] marine metagenome; seawater 6033 6107 + Arg TCG [ENA]
>WENV170944858 MDUO01007525 [MDUO] marine metagenome; 30 m water sample from station 6 834 908 + Arg TCG [ENA]
>WENV170953715 MEHZ011660651 [MEHZ] marine metagenome; marine surface water 3280 3206 - Arg TCG [ENA]
>WENV024180 AACY020786131 Marine microbial communities from Global Ocean Sampling (GOS) 113 36 - Arg TCG [ENA]
>ENV09004294 ADKQ01002941 Marine metagenome apWin_C1 540 466 - Arg TCG [ENA]
>WENV11101324 AGBE01001274 Marine metagenome, Gulf of Maine surface waters 640 714 + Arg TCG [ENA]
>WENV11101370 AGBE01002041 Marine metagenome, Gulf of Maine surface waters 7101 7175 + Arg TCG [ENA]
>WENV11101371 AGBE01002042 Marine metagenome, Gulf of Maine surface waters 793 867 + Arg TCG [ENA]
>WENV11101385 AGBE01002132 Marine metagenome, Gulf of Maine surface waters 35145 35071 - Arg TCG [ENA]
>W1610625308 LIAK01000187 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-120910-bin56 [LIAK] 345 271 - Arg TCG [ENA]
>W1610625330 LIAL01000047 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 6108 6034 - Arg TCG [ENA]
>W1610855531 LQMW01000024 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 34697 34771 + Arg TCG [ENA]
Identical group No.243731 (77 seq.)
>A171004122 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 182341 182267 - Arg TCG -
>WENV013811 AACY020380640 Marine microbial communities from Global Ocean Sampling (GOS) 165 242 + Arg TCG [ENA]
>WENV014543 AACY020404372 Marine microbial communities from Global Ocean Sampling (GOS) 889 812 - Arg TCG [ENA]
>WENV180047833 MPLT02273384 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 1184 1258 + Arg TCG [ENA]
>WENV180050034 MPLU02105079 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 662 588 - Arg TCG [ENA]
>WENV180052326 MPLU02288972 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 363 437 + Arg TCG [ENA]
>WENV180054693 MPLV02107422 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 95 169 + Arg TCG [ENA]
>WENV180054734 MPLV02110041 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 362 288 - Arg TCG [ENA]
>WENV180058366 MPLX02050749 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 2074 2148 + Arg TCG [ENA]
>WENV180364501 OBOA01017835 [OBOA] marine metagenome; Deep Chlorophyll Maximum 263 189 - Arg TCG [ENA]
>WENV183798702 PVBE010441498 [PVBE] marine metagenome; water 530 456 - Arg TCG [ENA]
>WENV183798709 PVBE010441731 [PVBE] marine metagenome; water 539 465 - Arg TCG [ENA]
>WENV170157950 CEOJ01106572 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 615 689 + Arg TCG [ENA]
>WENV170171965 CEOQ01085054 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5426 5352 - Arg TCG [ENA]
>WENV170184495 CEOZ01101570 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 345 419 + Arg TCG [ENA]
>WENV170196781 CEPK01070079 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 76 + Arg TCG [ENA]
>WENV170241161 CEQN01202515 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 524 450 - Arg TCG [ENA]
>WENV170256802 CEQX01132815 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 264 190 - Arg TCG [ENA]
>WENV170257879 CEQY01020573 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1065 1139 + Arg TCG [ENA]
>WENV170262485 CERB01190427 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 449 375 - Arg TCG [ENA]
>WENV170268482 CERG01090173 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 387 461 + Arg TCG [ENA]
>WENV170272117 CERK01040668 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1158 1232 + Arg TCG [ENA]
>WENV170279625 CERR01041342 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 135 209 + Arg TCG [ENA]
>WENV170364326 CETM01214903 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 92 18 - Arg TCG [ENA]
>WENV170430075 CEUR01112810 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 249 323 + Arg TCG [ENA]
>WENV170431651 CEUS01046565 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 880 806 - Arg TCG [ENA]
>WENV170431777 CEUS01052859 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4143 4069 - Arg TCG [ENA]
>WENV170434664 CEUS01273589 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 692 618 - Arg TCG [ENA]
>WENV170445480 CEUY01042218 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3245 3319 + Arg TCG [ENA]
>WENV170445720 CEUY01060319 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1099 1025 - Arg TCG [ENA]
>WENV170448621 CEUZ01020516 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 176 + Arg TCG [ENA]
>WENV170449334 CEUZ01053911 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3245 3319 + Arg TCG [ENA]
>WENV170449335 CEUZ01053912 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 880 806 - Arg TCG [ENA]
>WENV170452893 CEUZ01284869 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 787 713 - Arg TCG [ENA]
>WENV170462063 CEVD01037673 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 24468 24394 - Arg TCG [ENA]
>WENV170490809 CEVQ01019885 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1896 1970 + Arg TCG [ENA]
>WENV170498240 CEVT01018163 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 351 425 + Arg TCG [ENA]
>WENV170510482 CEVZ01004878 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 182 108 - Arg TCG [ENA]
>WENV170618589 FUWD012977508 [FUWD] metagenome; unknown 950 1024 + Arg TCG [ENA]
>WENV170730266 LULG01026582 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 221 147 - Arg TCG [ENA]
>WENV170731093 LULH01024733 [LULH] marine metagenome; Red Sea water column Station 169 - depth 100m 264 190 - Arg TCG [ENA]
>WENV170736575 LULM01009151 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 1062 1136 + Arg TCG [ENA]
>WENV170737236 LULN01007327 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 238 164 - Arg TCG [ENA]
>WENV170740891 LULS01001257 [LULS] marine metagenome; Red Sea water column Station 108 - depth 200m 3699 3773 + Arg TCG [ENA]
>WENV170741815 LULT01006545 [LULT] marine metagenome; Red Sea water column Station 108 - depth 100m 334 260 - Arg TCG [ENA]
>WENV170746260 LULZ01018846 [LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m 408 334 - Arg TCG [ENA]
>WENV170747685 LUMD01000016 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 102853 102927 + Arg TCG [ENA]
>WENV170748576 LUME01000015 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 37856 37930 + Arg TCG [ENA]
>WENV170749639 LUMF01003206 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 1359 1433 + Arg TCG [ENA]
>WENV170750491 LUMG01015932 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 81 7 - Arg TCG [ENA]
>WENV170754410 LUML01007014 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 263 189 - Arg TCG [ENA]
>WENV170756859 LUMP01002897 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 1527 1601 + Arg TCG [ENA]
>WENV170787051 MDSV01012270 [MDSV] marine metagenome; seawater 6463 6389 - Arg TCG [ENA]
>WENV170789058 MDSV01044245 [MDSV] marine metagenome; seawater 628 702 + Arg TCG [ENA]
>WENV170790657 MDSV01069822 [MDSV] marine metagenome; seawater 2620 2546 - Arg TCG [ENA]
>WENV170802557 MDSW01015412 [MDSW] marine metagenome; seawater 18 92 + Arg TCG [ENA]
>WENV170803821 MDSW01036316 [MDSW] marine metagenome; seawater 2541 2467 - Arg TCG [ENA]
>WENV170809704 MDSW01136555 [MDSW] marine metagenome; seawater 21 95 + Arg TCG [ENA]
>WENV170810685 MDSW01153227 [MDSW] marine metagenome; seawater 2718 2644 - Arg TCG [ENA]
>WENV170812126 MDSW01178146 [MDSW] marine metagenome; seawater 5367 5293 - Arg TCG [ENA]
>WENV170813183 MDSW01195396 [MDSW] marine metagenome; seawater 1775 1849 + Arg TCG [ENA]
>WENV170815415 MDSX01009678 [MDSX] marine metagenome; seawater 24 98 + Arg TCG [ENA]
>WENV170819325 MDSX01090588 [MDSX] marine metagenome; seawater 5774 5700 - Arg TCG [ENA]
>WENV170840550 MDSZ01206570 [MDSZ] marine metagenome; seawater 2 76 + Arg TCG [ENA]
>WENV170909205 MDTE01075054 [MDTE] marine metagenome; seawater 25 99 + Arg TCG [ENA]
>WENV170909362 MDTE01077241 [MDTE] marine metagenome; seawater 3164 3090 - Arg TCG [ENA]
>WENV170914174 MDTE01144420 [MDTE] marine metagenome; seawater 17 91 + Arg TCG [ENA]
>WENV170915268 MDTE01160971 [MDTE] marine metagenome; seawater 5178 5104 - Arg TCG [ENA]
>WENV170917416 MDTE01192199 [MDTE] marine metagenome; seawater 3735 3661 - Arg TCG [ENA]
>W1910647550 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 342524 342450 - Arg TCG [ENA]
>WENV003079 AACY020084062 Marine microbial communities from Global Ocean Sampling (GOS) 643 566 - Arg TCG [ENA]
>WENV034744 AACY021639154 Marine microbial communities from Global Ocean Sampling (GOS) 766 689 - Arg TCG [ENA]
>WENV035951 AACY021738514 Marine microbial communities from Global Ocean Sampling (GOS) 239 316 + Arg TCG [ENA]
>WENV037698 AACY021875830 Marine microbial communities from Global Ocean Sampling (GOS) 286 209 - Arg TCG [ENA]
>WENV039906 AACY022046426 Marine microbial communities from Global Ocean Sampling (GOS) 598 521 - Arg TCG [ENA]
>WENV040879 AACY022115051 Marine microbial communities from Global Ocean Sampling (GOS) 341 418 + Arg TCG [ENA]
>WENV041464 AACY022161246 Marine microbial communities from Global Ocean Sampling (GOS) 499 422 - Arg TCG [ENA]
Identical group No.244691 (6 seq.)
>A173000010 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 162816 162742 - Arg TCG -
>A173000118 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 127756 127682 - Arg TCG -
>A173000256 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 443252 443178 - Arg TCG -
>W1630000062 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1068692 1068618 - Arg TCG [ENA]
>W1630000368 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 115449 115375 - Arg TCG [ENA]
>W1630000375 AJVJ01000015 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 66155 66081 - Arg TCG [ENA]
Identical group No.261131 (1 seq.)
>A171007488 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 227500 227426 - Arg TCG -
Identical group No.268762 (1 seq.)
>At0094 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1949406 1949332 - Arg TCG [Ensembl]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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