tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = TGC

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.296460 (75 seq.)
>A171004098 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 263114 263190 + Ala TGC -
>WENV180044745 MOXS02032307 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 79 155 + Ala TGC [ENA]
>WENV180048185 MPLT02316245 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 749 825 + Ala TGC [ENA]
>WENV180048247 MPLT02322753 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 749 825 + Ala TGC [ENA]
>WENV180049314 MPLU02051214 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2376 2452 + Ala TGC [ENA]
>WENV180050827 MPLU02173452 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 265 189 - Ala TGC [ENA]
>WENV180053579 MPLV02026541 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 12990 12914 - Ala TGC [ENA]
>WENV180061763 MPLX02243404 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 13913 13837 - Ala TGC [ENA]
>WENV183798405 PVBE010416212 [PVBE] marine metagenome; water 732 656 - Ala TGC [ENA]
>WENV183804389 PVBE010925971 [PVBE] marine metagenome; water 749 825 + Ala TGC [ENA]
>WENV183804391 PVBE010926221 [PVBE] marine metagenome; water 749 825 + Ala TGC [ENA]
>WENV183805043 PVBE010982412 [PVBE] marine metagenome; water 476 552 + Ala TGC [ENA]
>WENV170112895 CENF01019012 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 658 734 + Ala TGC [ENA]
>WENV170112896 CENF01019109 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 114 - Ala TGC [ENA]
>WENV170153542 CEOF01103990 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 114 - Ala TGC [ENA]
>WENV170196477 CEPK01048393 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7370 7294 - Ala TGC [ENA]
>WENV170212792 CEPW01292529 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 112 - Ala TGC [ENA]
>WENV170227707 CEQF01123135 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 296 220 - Ala TGC [ENA]
>WENV170237730 CEQM01078843 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 724 648 - Ala TGC [ENA]
>WENV170240306 CEQN01110578 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 411 335 - Ala TGC [ENA]
>WENV170241829 CEQO01012727 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 366 290 - Ala TGC [ENA]
>WENV170248712 CEQQ01176958 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 421 345 - Ala TGC [ENA]
>WENV170252627 CEQU01020137 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 398 + Ala TGC [ENA]
>WENV170255384 CEQW01102366 [CEQW] marine metagenome genome assembly TARA_070_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 325 401 + Ala TGC [ENA]
>WENV170255694 CEQX01014808 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1757 1681 - Ala TGC [ENA]
>WENV170258112 CEQY01037520 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 114 - Ala TGC [ENA]
>WENV170261020 CERB01033619 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1272 1348 + Ala TGC [ENA]
>WENV170270315 CERI01076887 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 78 + Ala TGC [ENA]
>WENV170271826 CERK01011083 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 375 451 + Ala TGC [ENA]
>WENV170275480 CERM01122752 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 238 314 + Ala TGC [ENA]
>WENV170279270 CERR01009488 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1283 1207 - Ala TGC [ENA]
>WENV170281766 CERS01089157 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 367 443 + Ala TGC [ENA]
>WENV170283996 CERV01013030 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 544 620 + Ala TGC [ENA]
>WENV170285852 CERW01028731 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 194 118 - Ala TGC [ENA]
>WENV170285853 CERW01028732 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1306 1230 - Ala TGC [ENA]
>WENV170293390 CESB01180176 [CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 367 443 + Ala TGC [ENA]
>WENV170299270 CESG01022657 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1077 1001 - Ala TGC [ENA]
>WENV170320337 CESQ01334725 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 272 348 + Ala TGC [ENA]
>WENV170323693 CESS01017234 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 325 249 - Ala TGC [ENA]
>WENV170404952 CEUG01047584 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 199 123 - Ala TGC [ENA]
>WENV170408542 CEUI01035832 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 687 611 - Ala TGC [ENA]
>WENV020916 AACY020560680 Marine microbial communities from Global Ocean Sampling (GOS) 845 923 + Ala TGC [ENA]
>WENV170411838 CEUJ01365921 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 142 66 - Ala TGC [ENA]
>WENV170418997 CEUM01086223 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 370 446 + Ala TGC [ENA]
>WENV170424044 CEUO01059708 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 496 572 + Ala TGC [ENA]
>WENV170424944 CEUP01024731 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 304 380 + Ala TGC [ENA]
>WENV170441645 CEUV01250012 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 91 15 - Ala TGC [ENA]
>WENV170444660 CEUX01193588 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 633 557 - Ala TGC [ENA]
>WENV170444819 CEUY01004799 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 568 644 + Ala TGC [ENA]
>WENV170467610 CEVE01200946 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 232 - Ala TGC [ENA]
>WENV170469012 CEVF01078280 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 394 470 + Ala TGC [ENA]
>WENV170478421 CEVK01047671 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 125 - Ala TGC [ENA]
>WENV170487765 CEVO01089619 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 209 285 + Ala TGC [ENA]
>WENV170496971 CEVS01121117 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1017 1093 + Ala TGC [ENA]
>WENV170500142 CEVT01367709 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 157 233 + Ala TGC [ENA]
>WENV170500902 CEVU01057635 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 405 329 - Ala TGC [ENA]
>WENV170505905 CEVW01115613 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 114 - Ala TGC [ENA]
>WENV170513215 CEVZ01386092 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 670 746 + Ala TGC [ENA]
>WENV170515222 CEWB01010505 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 459 383 - Ala TGC [ENA]
>WENV170519444 CEWE01237182 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 651 575 - Ala TGC [ENA]
>WENV170599956 FUWD010099883 [FUWD] metagenome; unknown 144 68 - Ala TGC [ENA]
>WENV170625151 FUWD013192595 [FUWD] metagenome; unknown 2175 2251 + Ala TGC [ENA]
>WENV170625153 FUWD013192596 [FUWD] metagenome; unknown 69 145 + Ala TGC [ENA]
>WENV170633407 FUWD013395737 [FUWD] metagenome; unknown 2175 2251 + Ala TGC [ENA]
>WENV170633409 FUWD013395738 [FUWD] metagenome; unknown 69 145 + Ala TGC [ENA]
>WENV170730026 LULG01007693 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 1726 1650 - Ala TGC [ENA]
>WENV170736682 LULM01017305 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 722 798 + Ala TGC [ENA]
>WENV170747690 LUMD01000016 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 25195 25119 - Ala TGC [ENA]
>WENV170748561 LUME01000006 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 23256 23180 - Ala TGC [ENA]
>WENV170750080 LUMG01000155 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 707 783 + Ala TGC [ENA]
>WENV170756847 LUMP01002410 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 1359 1283 - Ala TGC [ENA]
>WENV170761547 LUMV01001281 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 7392 7316 - Ala TGC [ENA]
>WENV170930347 MDTG01166420 [MDTG] marine metagenome; seawater 2192 2116 - Ala TGC [ENA]
>W1910647541 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 424201 424277 + Ala TGC [ENA]
>W1610597538 LFEZ01000007 Nitrososphaerota Thaumarchaeota archaeon casp-thauma4 [LFEZ] 10100 10176 + Ala TGC [ENA]
Identical group No.300091 (13 seq.)
>A173000008 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 1363723 1363649 - Ala TGC -
>A173000116 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 1346374 1346300 - Ala TGC -
>A173000124 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 1378824 1378750 - Ala TGC -
>A173000254 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 1685938 1685864 - Ala TGC -
>A173000259 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 344227 344301 + Ala TGC -
>A173000339 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 237415 237489 + Ala TGC -
>W1630000064 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 624339 624265 - Ala TGC [ENA]
>W1630000366 AJVI01000004 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 65485 65411 - Ala TGC [ENA]
>W1630000371 AJVJ01000009 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 669 595 - Ala TGC [ENA]
>W1630000384 AJVJ01000047 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 77497 77571 + Ala TGC [ENA]
>W1630010225 LFEW01000013 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 60880 60806 - Ala TGC [ENA]
>W1630010233 LFEY01000011 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 22874 22948 + Ala TGC [ENA]
>W1630016211 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 195438 195364 - Ala TGC [ENA]
Identical group No.301941 (3 seq.)
>A179000635 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 2832927 2833018 + Ala TGC -
>A179000678 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1376767 1376676 - Ala TGC -
>A17A001548 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1376768 1376677 - Ala TGC -
Identical group No.391927 (4 seq.)
>A179000477 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 625760 625649 - Ala TGC -
>A179000493 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 1419228 1419331 + Ala TGC -
>A17A001173 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 625760 625649 - Ala TGC -
>A17A001199 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 1419228 1419331 + Ala TGC -
Identical group No.398589 (4 seq.)
>At0058 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 252238 252314 + Ala TGC [Ensembl]
>ENV004175 DQ397587 Environmental sample from ENV division of INSDC 20775 20851 + Ala TGC [ENA]
>ENV004206 DQ397828 Environmental sample from ENV division of INSDC 5033 5109 + Ala TGC [ENA]
>ENV004219 DQ397844 Environmental sample from ENV division of INSDC 23621 23697 + Ala TGC [ENA]
Identical group No.415939 (2 seq.)
>A17A000506 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 2357379 2357481 + Ala TGC -
>A179000209 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 2357379 2357480 + Ala TGC -
Identical group No.697081 (4 seq.)
>A171007483 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1518576 1518505 - Ala TGC -
>WENV180274936 OBHP01000449 [OBHP] metagenome; freshwater sediment 96 21 - Ala TGC [ENA]
>W1910285428 FRFC01000003 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 359131 359203 + Ala TGC [ENA]
>W1910402082 FUYK01000008 Nitrososphaerota Candidatus Nitrosotalea bavarica SbT1 [FUYK] 49212 49284 + Ala TGC [ENA]
Identical group No.735727 (2 seq.)
>A171006044 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 391784 391856 + Ala TGC -
>WENV180041961 LLBZ010809141 [LLBZ] soil metagenome; soil from tomato rhizosphere 591 517 - Ala TGC [ENA]
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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