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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Phycodnaviridae
Anticodon = TTT
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.460841 (2 seq.)
>VRL0100028
AB011503
Phycodnaviridae
Paramecium bursaria Chlorella virus EN5
1826
1898
+
Lys
TTT
[ENA]
¡û
>VRL181000268
JX997172
Phycodnaviridae
Paramecium bursaria Chlorella virus MA-1D (JX997172)
135073
135145
+
Lys
TTT
[ENA]
¡û
Identical group No.536294 (2 seq.)
>VRL183000124
KF481685
Phycodnaviridae
Emiliania huxleyi virus 18 EhV-18 (KF481685)
49735
49661
-
Lys
TTT
[ENA]
¡û
>VRL183000127
KF481687
Phycodnaviridae
Emiliania huxleyi virus 156 EhV-156 (KF481687)
50024
49950
-
Lys
TTT
[ENA]
¡û
Identical group No.549120 (12 seq.)
>VRL0100008
AB011501
Phycodnaviridae
Paramecium bursaria Chlorella virus CVK2
842
916
+
Lys
TTT
[ENA]
¡û
>VRL0100020
AB011502
Phycodnaviridae
Paramecium bursaria Chlorella virus UW1
1114
1188
+
Lys
TTT
[ENA]
¡û
>VRL0100036
AB011504
Phycodnaviridae
Paramecium bursaria Chlorella virus T16
939
1013
+
Lys
TTT
[ENA]
¡û
>VRL0100043
AB011505
Phycodnaviridae
Paramecium bursaria Chlorella virus T1
791
865
+
Lys
TTT
[ENA]
¡û
>VRL0100062
U42580
Phycodnaviridae
Paramecium bursaria Chlorella virus 1
165680
165754
+
Lys
TTT
[ENA]
¡û
>VRL181000055
JF411744
Phycodnaviridae
Paramecium bursaria Chlorella virus 1 (JF411744)
165709
165783
+
Lys
TTT
[ENA]
¡û
>VRL181000107
JX997153
Phycodnaviridae
Paramecium bursaria Chlorella virus AN69C (JX997153)
166092
166166
+
Lys
TTT
[ENA]
¡û
>VRL181000180
JX997162
Phycodnaviridae
Paramecium bursaria Chlorella virus CviKI (JX997162)
152720
152794
+
Lys
TTT
[ENA]
¡û
>VRL181000208
JX997165
Phycodnaviridae
Paramecium bursaria Chlorella virus CvsA1 (JX997165)
154564
154638
+
Lys
TTT
[ENA]
¡û
>VRL181000244
JX997169
Phycodnaviridae
Paramecium bursaria Chlorella virus IL-3A (JX997169)
160259
160333
+
Lys
TTT
[ENA]
¡û
>VRL181000257
JX997171
Phycodnaviridae
Paramecium bursaria Chlorella virus KS1B (JX997171)
129660
129734
+
Lys
TTT
[ENA]
¡û
>VRL181000278
JX997173
Phycodnaviridae
Paramecium bursaria Chlorella virus MA-1E (JX997173)
158788
158862
+
Lys
TTT
[ENA]
¡û
Identical group No.549122 (1 seq.)
>VRL181000521
KT820662
Phycodnaviridae
Chrysochromulina ericina virus (KT820662)
424072
424144
+
Lys
TTT
[ENA]
¡û
Identical group No.652602 (1 seq.)
>VRL181000593
KY322437
Phycodnaviridae
Tetraselmis virus 1 (KY322437)
372826
372900
+
Lys
TTT
[ENA]
¡û
Identical group No.652603 (1 seq.)
>VRL181000595
KY322437
Phycodnaviridae
Tetraselmis virus 1 (KY322437)
373014
373088
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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