tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = CAA

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.96948 (5 seq.)
>WENV170334515 CESY01232325 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 226 313 + Leu CAA [ENA] ¢þ
>WENV170435661 CEUS01531387 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1330 1417 + Leu CAA [ENA] ¢þ
>WENV170455479 CEVA01113913 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1478 1565 + Leu CAA [ENA] ¢þ
>WENV170491596 CEVQ01076882 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3889 3802 - Leu CAA [ENA] ¢þ
>SRA1013349 SRR020514.154139 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 158 71 - Leu CAA [SRA]
Identical group No.112484 (30 seq.)
>WENV180106468 OAPE01124266 [OAPE] marine metagenome; Sterivex cartridges 327 243 - Leu CAA [ENA] ¢þ
>WENV183798805 PVBE010451038 [PVBE] marine metagenome; water 1254 1170 - Leu CAA [ENA] ¢þ
>WENV170125655 CENP01059799 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1344 1260 - Leu CAA [ENA] ¢þ
>WENV170168395 CEOP01086005 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3052 3138 + Leu CAA [ENA] ¢þ
>WENV170229837 CEQG01198115 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 395 479 + Leu CAA [ENA] ¢þ
>WENV170264861 CERD01078733 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3 87 + Leu CAA [ENA] ¢þ
>WENV170278079 CERQ01050859 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1257 1173 - Leu CAA [ENA] ¢þ
>WENV170287984 CERX01058739 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1255 1169 - Leu CAA [ENA] ¢þ
>WENV170308406 CESL01025084 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 203 289 + Leu CAA [ENA] ¢þ
>WENV170336368 CETA01006679 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 92 6 - Leu CAA [ENA] ¢þ
>WENV170360290 CETL01087464 [CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 212 126 - Leu CAA [ENA] ¢þ
>WENV170379036 CETV01083393 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 211 127 - Leu CAA [ENA] ¢þ
>WENV170406988 CEUH01080809 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 362 278 - Leu CAA [ENA] ¢þ
>WENV170409550 CEUJ01034571 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 109 - Leu CAA [ENA] ¢þ
>WENV170435648 CEUS01528430 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 86 2 - Leu CAA [ENA] ¢þ
>WENV170457627 CEVA01484275 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1042 1128 + Leu CAA [ENA] ¢þ
>WENV170463047 CEVD01106803 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 410 326 - Leu CAA [ENA] ¢þ
>WENV170476042 CEVI01063612 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 655 741 + Leu CAA [ENA] ¢þ
>WENV170484345 CEVN01015316 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2581 2495 - Leu CAA [ENA] ¢þ
>WENV170491069 CEVQ01034991 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1944 2028 + Leu CAA [ENA] ¢þ
>WENV170499192 CEVT01125868 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 178 92 - Leu CAA [ENA] ¢þ
>WENV170604517 FUWD010404876 [FUWD] metagenome; unknown 71 157 + Leu CAA [ENA] ¢þ
>WENV170828827 MDSY01156357 [MDSY] marine metagenome; seawater 274 190 - Leu CAA [ENA] ¢þ
>WENV170921365 MDTG01012764 [MDTG] marine metagenome; seawater 2539 2453 - Leu CAA [ENA] ¢þ
>WENV170923043 MDTG01041933 [MDTG] marine metagenome; seawater 120 34 - Leu CAA [ENA] ¢þ
>SRA1009554 SRR020491.276022 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 139 53 - Leu CAA [SRA]
>SRA1013286 SRR020514.122335 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 85 -1 - Leu CAA [SRA]
>WENV031645 AACY021382860 Marine microbial communities from Global Ocean Sampling (GOS) 431 343 - Leu CAA [ENA]
>WENV035109 AACY021669826 Marine microbial communities from Global Ocean Sampling (GOS) 358 446 + Leu CAA [ENA]
>WENV053230 AACY023083482 Marine microbial communities from Global Ocean Sampling (GOS) 120 32 - Leu CAA [ENA]
Identical group No.117261 (30 seq.)
>WENV180059955 MPLX02141586 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 249 163 - Leu CAA [ENA] ¢þ
>WENV180077347 MPMB02043875 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 2426 2512 + Leu CAA [ENA] ¢þ
>WENV180079230 MPMB02150284 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 182 96 - Leu CAA [ENA] ¢þ
>WENV180079687 MPMB02177343 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 591 676 + Leu CAA [ENA] ¢þ
>WENV180091224 MPMF02182863 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 289 203 - Leu CAA [ENA] ¢þ
>WENV170122807 CENN01193357 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1990 1904 - Leu CAA [ENA] ¢þ
>WENV170127760 CENP01233638 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 300 386 + Leu CAA [ENA] ¢þ
>WENV170133250 CENU01014681 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11267 11181 - Leu CAA [ENA] ¢þ
>WENV170141032 CENX01144371 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1952 1866 - Leu CAA [ENA] ¢þ
>WENV170143228 CENY01057457 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1079 1165 + Leu CAA [ENA] ¢þ
>WENV170145970 CENZ01023826 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 289 375 + Leu CAA [ENA] ¢þ
>WENV170154339 CEOF01194246 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 300 386 + Leu CAA [ENA] ¢þ
>WENV170172286 CEOQ01106673 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1554 1640 + Leu CAA [ENA] ¢þ
>WENV170238633 CEQM01202404 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 89 3 - Leu CAA [ENA] ¢þ
>WENV170324565 CESS01092746 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1826 1740 - Leu CAA [ENA] ¢þ
>WENV170420677 CEUN01015420 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 302 388 + Leu CAA [ENA] ¢þ
>WENV170425716 CEUQ01018032 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 409 + Leu CAA [ENA] ¢þ
>WENV170445902 CEUY01077410 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 180 94 - Leu CAA [ENA] ¢þ
>WENV170455053 CEVA01080124 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 563 477 - Leu CAA [ENA] ¢þ
>WENV170464453 CEVD01213382 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3756 3670 - Leu CAA [ENA] ¢þ
>WENV170474894 CEVH01184339 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 520 434 - Leu CAA [ENA] ¢þ
>WENV170480479 CEVL01105642 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1931 1845 - Leu CAA [ENA] ¢þ
>WENV170485915 CEVN01149399 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 402 488 + Leu CAA [ENA] ¢þ
>WENV170519344 CEWE01228101 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 394 + Leu CAA [ENA] ¢þ
>WENV170835813 MDSZ01120570 [MDSZ] marine metagenome; seawater 760 846 + Leu CAA [ENA] ¢þ
>WENV170846993 MDTA01052108 [MDTA] marine metagenome; seawater 738 824 + Leu CAA [ENA] ¢þ
>WENV170900790 MDTD01159446 [MDTD] marine metagenome; seawater 3160 3074 - Leu CAA [ENA] ¢þ
>WENV170909066 MDTE01073272 [MDTE] marine metagenome; seawater 619 705 + Leu CAA [ENA] ¢þ
>WENV170947162 MDUS01029478 [MDUS] marine metagenome; 300 m water sample from station 6 610 696 + Leu CAA [ENA] ¢þ
>SRA1013305 SRR020514.134048 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 150 236 + Leu CAA [SRA]
Identical group No.142926 (1 seq.)
>SRA1013215 SRR020514.74303 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 159 73 - Leu CAA [SRA]
Identical group No.142928 (1 seq.)
>SRA1013259 SRR020514.99889 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 145 59 - Leu CAA [SRA]
Identical group No.142929 (1 seq.)
>SRA1013370 SRR020514.163554 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 97 181 + Leu CAA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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