tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = CAC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.657460 (92 seq.)
>WENV180050238 MPLU02120960 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 4305 4379 + Val CAC [ENA] ¢þ
>WENV180059837 MPLX02135192 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 162 88 - Val CAC [ENA] ¢þ
>WENV180060467 MPLX02170780 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1052 978 - Val CAC [ENA] ¢þ
>WENV180061018 MPLX02202276 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 4554 4628 + Val CAC [ENA] ¢þ
>WENV180062337 MPLX02280793 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 80 6 - Val CAC [ENA] ¢þ
>WENV180062403 MPLX02284025 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 62 136 + Val CAC [ENA] ¢þ
>WENV180062544 MPLX02293856 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 124 198 + Val CAC [ENA] ¢þ
>WENV180064930 MPLY02031425 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 494 568 + Val CAC [ENA] ¢þ
>WENV180064986 MPLY02034914 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 833 907 + Val CAC [ENA] ¢þ
>WENV180065175 MPLY02045579 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 4497 4423 - Val CAC [ENA] ¢þ
>WENV180065860 MPLY02092359 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 1292 1366 + Val CAC [ENA] ¢þ
>WENV180068490 MPLZ02050594 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 225 299 + Val CAC [ENA] ¢þ
>WENV180070112 MPLZ02149876 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 63 137 + Val CAC [ENA] ¢þ
>WENV180070278 MPLZ02158886 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 5822 5896 + Val CAC [ENA] ¢þ
>WENV180071036 MPLZ02208693 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 63 137 + Val CAC [ENA] ¢þ
>WENV180072568 MPMA02027892 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 5289 5215 - Val CAC [ENA] ¢þ
>WENV180074093 MPMA02120667 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 5545 5471 - Val CAC [ENA] ¢þ
>WENV180074769 MPMA02165743 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 60 134 + Val CAC [ENA] ¢þ
>WENV180076586 MPMB02004755 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 62 136 + Val CAC [ENA] ¢þ
>WENV180076808 MPMB02015717 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 1362 1288 - Val CAC [ENA] ¢þ
>WENV180077432 MPMB02049071 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 80 6 - Val CAC [ENA] ¢þ
>WENV180080304 MPMB02220748 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 836 910 + Val CAC [ENA] ¢þ
>WENV180082848 MPMC02263594 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 277 203 - Val CAC [ENA] ¢þ
>WENV180083358 MPMD02047828 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 89 15 - Val CAC [ENA] ¢þ
>WENV180085381 MPMD02318564 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 166 92 - Val CAC [ENA] ¢þ
>WENV180088121 MPMF02013924 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 1710 1784 + Val CAC [ENA] ¢þ
>WENV180089857 MPMF02107673 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 1646 1720 + Val CAC [ENA] ¢þ
>WENV181309362 OFIV01007310 [OFIV] marine metagenome; seawater 202 128 - Val CAC [ENA] ¢þ
>WENV181310949 OFJA01021096 [OFJA] marine metagenome; seawater 368 442 + Val CAC [ENA] ¢þ
>WENV181315744 OFJQ01004804 [OFJQ] marine metagenome; seawater 675 749 + Val CAC [ENA] ¢þ
>WENV181316233 OFJT01006391 [OFJT] marine metagenome; seawater 370 444 + Val CAC [ENA] ¢þ
>WENV183699428 OZSS01025584 [OZSS] metagenome; Seawater sample 534 608 + Val CAC [ENA] ¢þ
>WENV183796437 PVBE010248193 [PVBE] marine metagenome; water 1593 1667 + Val CAC [ENA] ¢þ
>WENV183800927 PVBE010630092 [PVBE] marine metagenome; water 683 609 - Val CAC [ENA] ¢þ
>WENV183802056 PVBE010729918 [PVBE] marine metagenome; water 3654 3728 + Val CAC [ENA] ¢þ
>WENV183805733 PVBE011047431 [PVBE] marine metagenome; water 161 235 + Val CAC [ENA] ¢þ
>WENV170114722 CENF01214908 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6559 6485 - Val CAC [ENA] ¢þ
>WENV170118734 CENJ01085982 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5874 5800 - Val CAC [ENA] ¢þ
>WENV170123906 CENO01088001 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 371 445 + Val CAC [ENA] ¢þ
>WENV170128760 CENQ01031005 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 74 1 - Val CAC [ENA] ¢þ
>WENV170141214 CENX01166458 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5918 5992 + Val CAC [ENA] ¢þ
>WENV170142497 CENY01011858 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 392 318 - Val CAC [ENA] ¢þ
>WENV170164048 CEOM01196838 [CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 37983 38057 + Val CAC [ENA] ¢þ
>WENV170171735 CEOQ01072884 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1580 1506 - Val CAC [ENA] ¢þ
>WENV170171903 CEOQ01081388 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1375 1301 - Val CAC [ENA] ¢þ
>WENV170208053 CEPU01147315 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 3 - Val CAC [ENA] ¢þ
>WENV170227471 CEQF01090509 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 141 215 + Val CAC [ENA] ¢þ
>WENV170230724 CEQH01069778 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 369 443 + Val CAC [ENA] ¢þ
>WENV170231178 CEQH01130703 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 299 373 + Val CAC [ENA] ¢þ
>WENV170260349 CEQZ01015175 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 843 915 + Val CAC [ENA] ¢þ
>WENV170264017 CERC01133624 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3920 3846 - Val CAC [ENA] ¢þ
>WENV170265719 CERE01008897 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 102 - Val CAC [ENA] ¢þ
>WENV170285434 CERV01225433 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 819 890 + Val CAC [ENA] ¢þ
>WENV170300100 CESG01092410 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 411 485 + Val CAC [ENA] ¢þ
>WENV170320931 CESR01018955 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 852 778 - Val CAC [ENA] ¢þ
>WENV170371412 CETS01010284 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 175 101 - Val CAC [ENA] ¢þ
>WENV170382704 CETX01038672 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 886 960 + Val CAC [ENA] ¢þ
>WENV170394996 CEUC01074184 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 151 225 + Val CAC [ENA] ¢þ
>WENV170395339 CEUC01101830 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 685 759 + Val CAC [ENA] ¢þ
>WENV170432871 CEUS01128035 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 932 1006 + Val CAC [ENA] ¢þ
>WENV170433362 CEUS01168850 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4779 4705 - Val CAC [ENA] ¢þ
>WENV170445281 CEUY01031379 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 187 113 - Val CAC [ENA] ¢þ
>WENV170455559 CEVA01121174 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1624 1698 + Val CAC [ENA] ¢þ
>WENV170475192 CEVH01270831 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 76 + Val CAC [ENA] ¢þ
>WENV170506331 CEVW01144421 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 74 1 - Val CAC [ENA] ¢þ
>WENV170519611 CEWE01248179 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1067 1138 + Val CAC [ENA] ¢þ
>WENV170599492 FUWD010077086 [FUWD] metagenome; unknown 153 79 - Val CAC [ENA] ¢þ
>WENV170599880 FUWD010095948 [FUWD] metagenome; unknown 24 98 + Val CAC [ENA] ¢þ
>WENV170604948 FUWD010437408 [FUWD] metagenome; unknown 197 271 + Val CAC [ENA] ¢þ
>WENV170621342 FUWD013056076 [FUWD] metagenome; unknown 1339 1413 + Val CAC [ENA] ¢þ
>WENV170622033 FUWD013084640 [FUWD] metagenome; unknown 1080 1154 + Val CAC [ENA] ¢þ
>WENV170625240 FUWD013193929 [FUWD] metagenome; unknown 1680 1754 + Val CAC [ENA] ¢þ
>WENV170629519 FUWD013272493 [FUWD] metagenome; unknown 1339 1413 + Val CAC [ENA] ¢þ
>WENV170630235 FUWD013299617 [FUWD] metagenome; unknown 1080 1154 + Val CAC [ENA] ¢þ
>WENV170633485 FUWD013396889 [FUWD] metagenome; unknown 1680 1754 + Val CAC [ENA] ¢þ
>WENV170764084 LWDU01029750 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 2314 2388 + Val CAC [ENA] ¢þ
>WENV170787501 MDSV01019323 [MDSV] marine metagenome; seawater 77734 77660 - Val CAC [ENA] ¢þ
>WENV170820576 MDSY01006955 [MDSY] marine metagenome; seawater 85199 85273 + Val CAC [ENA] ¢þ
>WENV170834674 MDSZ01101221 [MDSZ] marine metagenome; seawater 56595 56521 - Val CAC [ENA] ¢þ
>WENV170835733 MDSZ01119284 [MDSZ] marine metagenome; seawater 1504 1578 + Val CAC [ENA] ¢þ
>WENV170860626 MDTB01053797 [MDTB] marine metagenome; seawater 124 50 - Val CAC [ENA] ¢þ
>WENV170871312 MDTB01203926 [MDTB] marine metagenome; seawater 77734 77660 - Val CAC [ENA] ¢þ
>WENV170889410 MDTC01274385 [MDTC] marine metagenome; seawater 22 96 + Val CAC [ENA] ¢þ
>WENV170903052 MDTD01195983 [MDTD] marine metagenome; seawater 2062 2136 + Val CAC [ENA] ¢þ
>WENV170905100 MDTE01021171 [MDTE] marine metagenome; seawater 109 35 - Val CAC [ENA] ¢þ
>WENV170912191 MDTE01116974 [MDTE] marine metagenome; seawater 77734 77660 - Val CAC [ENA] ¢þ
>WENV170946682 MDUS01001664 [MDUS] marine metagenome; 300 m water sample from station 6 108 34 - Val CAC [ENA] ¢þ
>WENV170963417 MRWG01000171 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 70080 70006 - Val CAC [ENA] ¢þ
>WENV170963832 MRWG01000903 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 9488 9414 - Val CAC [ENA] ¢þ
>SRA1013302 SRR020514.133124 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 90 164 + Val CAC [SRA]
>WENV032805 AACY021476204 Marine microbial communities from Global Ocean Sampling (GOS) 193 267 + Val CAC [ENA]
>WENV043766 AACY022356892 Marine microbial communities from Global Ocean Sampling (GOS) 727 801 + Val CAC [ENA]
Identical group No.702973 (2 seq.)
>WENV170300766 CESG01173788 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 451 525 + Val CAC [ENA] ¢þ
>SRA1013300 SRR020514.130479 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 18 92 + Val CAC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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