tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = CGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.479368 (36 seq.)
>WENV180093535 MPMF02326732 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 153 80 - Ala CGC [ENA] ¢þ
>WENV181306414 OFIK01020436 [OFIK] marine metagenome; seawater 444 369 - Ala CGC [ENA] ¢þ
>WENV181309097 OFIU01017655 [OFIU] marine metagenome; seawater 527 602 + Ala CGC [ENA] ¢þ
>WENV181310186 OFIZ01006058 [OFIZ] marine metagenome; seawater 1082 1157 + Ala CGC [ENA] ¢þ
>WENV181318456 OFJZ01033193 [OFJZ] marine metagenome; seawater 315 390 + Ala CGC [ENA] ¢þ
>WENV181320252 OFKG01004247 [OFKG] marine metagenome; seawater 832 757 - Ala CGC [ENA] ¢þ
>WENV183806944 PVBE011159441 [PVBE] marine metagenome; water 4142 4067 - Ala CGC [ENA] ¢þ
>WENV183809414 PVBE011385964 [PVBE] marine metagenome; water 1112 1187 + Ala CGC [ENA] ¢þ
>WENV170191355 CEPD01010970 [CEPD] marine metagenome genome assembly TARA_064_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 589 514 - Ala CGC [ENA] ¢þ
>WENV170225214 CEQE01118853 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 349 274 - Ala CGC [ENA] ¢þ
>WENV170227128 CEQF01048320 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1918 1843 - Ala CGC [ENA] ¢þ
>WENV170299769 CESG01060125 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14340 14415 + Ala CGC [ENA] ¢þ
>WENV170369700 CETR01027085 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 291 366 + Ala CGC [ENA] ¢þ
>WENV170387870 CETZ01020895 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3257 3182 - Ala CGC [ENA] ¢þ
>WENV170422657 CEUN01175512 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 719 644 - Ala CGC [ENA] ¢þ
>WENV170427388 CEUQ01170692 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1555 1480 - Ala CGC [ENA] ¢þ
>WENV170431369 CEUS01033011 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1946 2021 + Ala CGC [ENA] ¢þ
>WENV170431864 CEUS01057844 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 796 871 + Ala CGC [ENA] ¢þ
>WENV170432145 CEUS01070396 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20896 20821 - Ala CGC [ENA] ¢þ
>WENV170432227 CEUS01076732 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7184 7259 + Ala CGC [ENA] ¢þ
>WENV170432258 CEUS01079067 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3713 3638 - Ala CGC [ENA] ¢þ
>WENV170433411 CEUS01173480 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 936 861 - Ala CGC [ENA] ¢þ
>WENV170444923 CEUY01011675 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 907 982 + Ala CGC [ENA] ¢þ
>WENV170455008 CEVA01075877 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2736 2811 + Ala CGC [ENA] ¢þ
>WENV170455047 CEVA01079793 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1810 1735 - Ala CGC [ENA] ¢þ
>WENV170455083 CEVA01082683 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 365 + Ala CGC [ENA] ¢þ
>WENV170487045 CEVO01019996 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9573 9498 - Ala CGC [ENA] ¢þ
>WENV170490758 CEVQ01016817 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3395 3320 - Ala CGC [ENA] ¢þ
>WENV170492194 CEVQ01125685 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 478 403 - Ala CGC [ENA] ¢þ
>WENV170492232 CEVQ01127792 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 437 512 + Ala CGC [ENA] ¢þ
>WENV170492295 CEVQ01131671 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 518 593 + Ala CGC [ENA] ¢þ
>WENV170610094 FUWD011678371 [FUWD] metagenome; unknown 92 17 - Ala CGC [ENA] ¢þ
>WENV170730170 LULG01017950 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 543 468 - Ala CGC [ENA] ¢þ
>WENV170906384 MDTE01037884 [MDTE] marine metagenome; seawater 851 926 + Ala CGC [ENA] ¢þ
>SRA1013229 SRR020514.79282 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 137 212 + Ala CGC [SRA]
>WENV080945 ABEF01016292 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 604 527 - Ala CGC [ENA]
Identical group No.602915 (1 seq.)
>SRA1013134 SRR020514.35700 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 201 126 - Ala CGC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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