tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = GGA

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.27573 (1 seq.)
>SRA1013130 SRR020514.33995 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 90 181 + Ser GGA [SRA]
Identical group No.45827 (58 seq.)
>WENV180048928 MPLU02021280 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 1872 1961 + Ser GGA [ENA] ¢þ
>WENV180053364 MPLV02012152 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 525 614 + Ser GGA [ENA] ¢þ
>WENV180060187 MPLX02155745 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 177 88 - Ser GGA [ENA] ¢þ
>WENV180063824 MPLX02377555 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 88 1 - Ser GGA [ENA] ¢þ
>WENV180071135 MPLZ02216865 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 1329 1418 + Ser GGA [ENA] ¢þ
>WENV180072123 MPMA02002710 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 926 1015 + Ser GGA [ENA] ¢þ
>WENV180074848 MPMA02171886 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 3935 3846 - Ser GGA [ENA] ¢þ
>WENV180573280 OCLV01001508 [OCLV] marine metagenome; marine 587 676 + Ser GGA [ENA] ¢þ
>ENV08000416 ABMD01047480 viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands) 20 109 + Ser GGA [ENA] ¡û
>WENV183794519 PVBE010104813 [PVBE] marine metagenome; water 998 909 - Ser GGA [ENA] ¢þ
>WENV183796245 PVBE010232200 [PVBE] marine metagenome; water 126 37 - Ser GGA [ENA] ¢þ
>WENV183798451 PVBE010420020 [PVBE] marine metagenome; water 1330 1241 - Ser GGA [ENA] ¢þ
>WENV183804582 PVBE010940372 [PVBE] marine metagenome; water 820 909 + Ser GGA [ENA] ¢þ
>WENV183808361 PVBE011289132 [PVBE] marine metagenome; water 4574 4662 + Ser GGA [ENA] ¢þ
>WENV170173960 CEOQ01258171 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 964 875 - Ser GGA [ENA] ¢þ
>WENV170214304 CEPX01076482 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 139 228 + Ser GGA [ENA] ¢þ
>WENV170223933 CEQE01015857 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 104 193 + Ser GGA [ENA] ¢þ
>WENV170282169 CERS01149438 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 333 244 - Ser GGA [ENA] ¢þ
>WENV170389768 CEUA01040887 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 110 199 + Ser GGA [ENA] ¢þ
>WENV170390817 CEUA01163085 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 313 224 - Ser GGA [ENA] ¢þ
>WENV170430996 CEUS01015304 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 612 523 - Ser GGA [ENA] ¢þ
>WENV170431082 CEUS01019675 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3137 3226 + Ser GGA [ENA] ¢þ
>WENV170433207 CEUS01155157 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 180 269 + Ser GGA [ENA] ¢þ
>WENV170448287 CEUZ01004921 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1016 927 - Ser GGA [ENA] ¢þ
>WENV170448620 CEUZ01020510 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 549 460 - Ser GGA [ENA] ¢þ
>WENV170451148 CEUZ01166506 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1800 1889 + Ser GGA [ENA] ¢þ
>WENV170461721 CEVD01018035 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2080 2169 + Ser GGA [ENA] ¢þ
>WENV170462994 CEVD01101851 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6814 6725 - Ser GGA [ENA] ¢þ
>WENV170463206 CEVD01121617 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 276 187 - Ser GGA [ENA] ¢þ
>WENV170464316 CEVD01207263 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 606 517 - Ser GGA [ENA] ¢þ
>WENV170526365 CEWI01026358 [CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1498 1409 - Ser GGA [ENA] ¢þ
>WENV170606923 FUWD010752455 [FUWD] metagenome; unknown 107 196 + Ser GGA [ENA] ¢þ
>WENV170610304 FUWD011813629 [FUWD] metagenome; unknown 146 57 - Ser GGA [ENA] ¢þ
>WENV170611231 FUWD012244890 [FUWD] metagenome; unknown 92 181 + Ser GGA [ENA] ¢þ
>WENV170664478 JYMV01016689 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 688 599 - Ser GGA [ENA] ¢þ
>WENV170753967 LUMK01021584 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 90 1 - Ser GGA [ENA] ¢þ
>WENV170803054 MDSW01024011 [MDSW] marine metagenome; seawater 4599 4688 + Ser GGA [ENA] ¢þ
>WENV170828195 MDSY01144739 [MDSY] marine metagenome; seawater 94 5 - Ser GGA [ENA] ¢þ
>WENV170905331 MDTE01024336 [MDTE] marine metagenome; seawater 2705 2794 + Ser GGA [ENA] ¢þ
>WENV170905981 MDTE01032294 [MDTE] marine metagenome; seawater 17851 17762 - Ser GGA [ENA] ¢þ
>WENV170906690 MDTE01042077 [MDTE] marine metagenome; seawater 3683 3772 + Ser GGA [ENA] ¢þ
>WENV170911497 MDTE01106858 [MDTE] marine metagenome; seawater 92 3 - Ser GGA [ENA] ¢þ
>WENV170917636 MDTE01195375 [MDTE] marine metagenome; seawater 3235 3146 - Ser GGA [ENA] ¢þ
>WENV024963 AACY020850913 Marine microbial communities from Global Ocean Sampling (GOS) 800 709 - Ser GGA [ENA]
>SRA1000395 SRR001042.51768 Line Islands Corals, viral fraction of Christmas Atoll (SRP000134) 20 109 + Ser GGA [SRA]
>SRA1000493 SRR001042.248243 Line Islands Corals, viral fraction of Christmas Atoll (SRP000134) 20 109 + Ser GGA [SRA]
>W1810523970 QCLK01000004 Alphaproteobacteria Pelagibacteraceae bacterium AG-414-E02 [QCLK] 610 521 - Ser GGA [ENA] ¡û
>W1810526161 QCOX01000002 Alphaproteobacteria Pelagibacteraceae bacterium AG-435-N18 [QCOX] 1705 1616 - Ser GGA [ENA] ¡û
>SRA1009786 SRR020491.357458 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 235 146 - Ser GGA [SRA]
>SRA1009986 SRR020491.421116 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 99 10 - Ser GGA [SRA]
>SRA1013269 SRR020514.108708 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 30 119 + Ser GGA [SRA]
>WENV030512 AACY021288538 Marine microbial communities from Global Ocean Sampling (GOS) 729 820 + Ser GGA [ENA]
>WENV033305 AACY021518408 Marine microbial communities from Global Ocean Sampling (GOS) 517 608 + Ser GGA [ENA]
>WENV040738 AACY022104886 Marine microbial communities from Global Ocean Sampling (GOS) 896 805 - Ser GGA [ENA]
>WENV066541 AACY023652855 Marine microbial communities from Global Ocean Sampling (GOS) 493 404 - Ser GGA [ENA]
>WENV067460 AACY023690607 Marine microbial communities from Global Ocean Sampling (GOS) 1001 910 - Ser GGA [ENA]
>WENV067686 AACY023699117 Marine microbial communities from Global Ocean Sampling (GOS) 708 617 - Ser GGA [ENA]
>WENV067733 AACY023700757 Marine microbial communities from Global Ocean Sampling (GOS) 1000 1091 + Ser GGA [ENA]
Identical group No.48879 (4 seq.)
>WENV170260691 CERA01065243 [CERA] marine metagenome genome assembly TARA_068_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 88 1 - Ser GGA [ENA] ¢þ
>WENV170271580 CERJ01052117 [CERJ] marine metagenome genome assembly TARA_066_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 128 - Ser GGA [ENA] ¢þ
>WENV170345721 CETF01059164 [CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 472 383 - Ser GGA [ENA] ¢þ
>SRA1013333 SRR020514.148381 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 162 75 - Ser GGA [SRA]
Identical group No.48893 (52 seq.)
>WENV014400 AACY020399279 Marine microbial communities from Global Ocean Sampling (GOS) 2470 2561 + Ser GGA [ENA]
>WENV180058861 MPLX02077669 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1442 1353 - Ser GGA [ENA] ¢þ
>WENV180059775 MPLX02131605 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1304 1215 - Ser GGA [ENA] ¢þ
>WENV180063134 MPLX02333295 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 865 954 + Ser GGA [ENA] ¢þ
>WENV180070503 MPLZ02171509 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 145 56 - Ser GGA [ENA] ¢þ
>WENV180075681 MPMA02226167 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 427 516 + Ser GGA [ENA] ¢þ
>WENV180089920 MPMF02109912 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 494 583 + Ser GGA [ENA] ¢þ
>WENV183805664 PVBE011042152 [PVBE] marine metagenome; water 2891 2980 + Ser GGA [ENA] ¢þ
>WENV170261258 CERB01052947 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 207 118 - Ser GGA [ENA] ¢þ
>WENV170350937 CETH01115614 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 887 976 + Ser GGA [ENA] ¢þ
>WENV170351976 CETH01175074 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 670 581 - Ser GGA [ENA] ¢þ
>WENV170358319 CETK01079747 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 194 283 + Ser GGA [ENA] ¢þ
>WENV170362727 CETM01096116 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3588 3677 + Ser GGA [ENA] ¢þ
>WENV170395278 CEUC01096948 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 201 - Ser GGA [ENA] ¢þ
>WENV020904 AACY020560477 Marine microbial communities from Global Ocean Sampling (GOS) 1956 1865 - Ser GGA [ENA]
>WENV170415895 CEUL01078241 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1096 1007 - Ser GGA [ENA] ¢þ
>WENV170426103 CEUQ01051770 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1097 1008 - Ser GGA [ENA] ¢þ
>WENV170451099 CEUZ01162236 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 265 + Ser GGA [ENA] ¢þ
>WENV170494520 CEVR01098029 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 254 165 - Ser GGA [ENA] ¢þ
>WENV170599506 FUWD010077744 [FUWD] metagenome; unknown 257 346 + Ser GGA [ENA] ¢þ
>WENV170608438 FUWD010952717 [FUWD] metagenome; unknown 301 212 - Ser GGA [ENA] ¢þ
>WENV170608781 FUWD011082787 [FUWD] metagenome; unknown 35 124 + Ser GGA [ENA] ¢þ
>WENV170618764 FUWD012985292 [FUWD] metagenome; unknown 414 325 - Ser GGA [ENA] ¢þ
>WENV170737213 LULN01006229 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 388 477 + Ser GGA [ENA] ¢þ
>WENV170749130 LUME01011968 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 690 779 + Ser GGA [ENA] ¢þ
>WENV170807209 MDSW01094558 [MDSW] marine metagenome; seawater 317 228 - Ser GGA [ENA] ¢þ
>WENV170810102 MDSW01143346 [MDSW] marine metagenome; seawater 3040 2951 - Ser GGA [ENA] ¢þ
>WENV170810294 MDSW01146449 [MDSW] marine metagenome; seawater 4834 4923 + Ser GGA [ENA] ¢þ
>WENV170812079 MDSW01177297 [MDSW] marine metagenome; seawater 2034 2123 + Ser GGA [ENA] ¢þ
>WENV170831611 MDSZ01047170 [MDSZ] marine metagenome; seawater 114 25 - Ser GGA [ENA] ¢þ
>WENV170837397 MDSZ01148633 [MDSZ] marine metagenome; seawater 182 93 - Ser GGA [ENA] ¢þ
>WENV170845390 MDTA01023059 [MDTA] marine metagenome; seawater 3688 3777 + Ser GGA [ENA] ¢þ
>WENV170862940 MDTB01084349 [MDTB] marine metagenome; seawater 10342 10253 - Ser GGA [ENA] ¢þ
>WENV170887220 MDTC01235851 [MDTC] marine metagenome; seawater 698 609 - Ser GGA [ENA] ¢þ
>WENV170910737 MDTE01096093 [MDTE] marine metagenome; seawater 3085 3174 + Ser GGA [ENA] ¢þ
>WENV170911693 MDTE01109838 [MDTE] marine metagenome; seawater 24374 24463 + Ser GGA [ENA] ¢þ
>WENV170929825 MDTG01156784 [MDTG] marine metagenome; seawater 1705 1794 + Ser GGA [ENA] ¢þ
>WENV170930583 MDTG01169958 [MDTG] marine metagenome; seawater 2882 2793 - Ser GGA [ENA] ¢þ
>WENV170932552 MDTG01204604 [MDTG] marine metagenome; seawater 2457 2546 + Ser GGA [ENA] ¢þ
>WENV170935444 MDTG01256702 [MDTG] marine metagenome; seawater 154 65 - Ser GGA [ENA] ¢þ
>WENV025364 AACY020882219 Marine microbial communities from Global Ocean Sampling (GOS) 122 211 + Ser GGA [ENA]
>SRA1013291 SRR020514.124472 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 113 24 - Ser GGA [SRA]
>SRA1013311 SRR020514.136760 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 196 107 - Ser GGA [SRA]
>WENV030850 AACY021316651 Marine microbial communities from Global Ocean Sampling (GOS) 827 736 - Ser GGA [ENA]
>WENV037866 AACY021888372 Marine microbial communities from Global Ocean Sampling (GOS) 447 358 - Ser GGA [ENA]
>WENV048332 AACY022726221 Marine microbial communities from Global Ocean Sampling (GOS) 510 421 - Ser GGA [ENA]
>WENV051565 AACY022964037 Marine microbial communities from Global Ocean Sampling (GOS) 257 348 + Ser GGA [ENA]
>WENV052673 AACY023041926 Marine microbial communities from Global Ocean Sampling (GOS) 229 138 - Ser GGA [ENA]
>WENV053616 AACY023108645 Marine microbial communities from Global Ocean Sampling (GOS) 86 177 + Ser GGA [ENA]
>WENV067232 AACY023680612 Marine microbial communities from Global Ocean Sampling (GOS) 296 205 - Ser GGA [ENA]
>WENV068214 AACY023718234 Marine microbial communities from Global Ocean Sampling (GOS) 1036 947 - Ser GGA [ENA]
>WENV072974 AACY023904677 Marine microbial communities from Global Ocean Sampling (GOS) 1537 1628 + Ser GGA [ENA]
Identical group No.54535 (10 seq.)
>WENV170230545 CEQH01047585 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 168 79 - Ser GGA [ENA] ¢þ
>WENV170264505 CERD01039016 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2040 1951 - Ser GGA [ENA] ¢þ
>WENV170333438 CESY01045938 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 164 75 - Ser GGA [ENA] ¢þ
>WENV170356378 CETJ01026727 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 166 77 - Ser GGA [ENA] ¢þ
>WENV170369830 CETR01037932 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2749 2838 + Ser GGA [ENA] ¢þ
>WENV170371469 CETS01013232 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2204 2293 + Ser GGA [ENA] ¢þ
>WENV170477124 CEVJ01037671 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 316 227 - Ser GGA [ENA] ¢þ
>WENV170478082 CEVK01009169 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 505 594 + Ser GGA [ENA] ¢þ
>SRA1013189 SRR020514.64130 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 9 98 + Ser GGA [SRA]
>SRA1013264 SRR020514.104538 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 9 98 + Ser GGA [SRA]
Identical group No.65403 (2 seq.)
>WENV170279026 CERQ01217917 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 352 + Ser GGA [ENA] ¢þ
>SRA1013186 SRR020514.61783 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 135 46 - Ser GGA [SRA]
Identical group No.65404 (1 seq.)
>SRA1013343 SRR020514.151984 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 14 103 + Ser GGA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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