tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = GGC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462253 (15 seq.)
>WENV180693965 OCZS011803693 [OCZS] soil metagenome; soil 188 116 - Ala GGC [ENA] ¢þ
>WENV181315943 OFJR01005129 [OFJR] marine metagenome; seawater 167 239 + Ala GGC [ENA] ¢þ
>WENV183661050 ORJL010078193 [ORJL] groundwater metagenome; groundwater 3841 3916 + Ala GGC [ENA] ¢þ
>WENV183667835 ORJL010685525 [ORJL] groundwater metagenome; groundwater 687 612 - Ala GGC [ENA] ¢þ
>WENV183675809 ORJL011551876 [ORJL] groundwater metagenome; groundwater 645 570 - Ala GGC [ENA] ¢þ
>WENV183683114 ORMF010533493 [ORMF] groundwater metagenome; groundwater 494 569 + Ala GGC [ENA] ¢þ
>WENV170682953 LFIK01002984 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 6934 6861 - Ala GGC [ENA] ¢þ
>WENV170714837 LNFM01106112 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 75 150 + Ala GGC [ENA] ¢þ
>WENV170770794 LXNI01000075 [LXNI] sponge metagenome; marine sponge reef 103339 103266 - Ala GGC [ENA] ¢þ
>WENV170772658 LXNJ01000234 [LXNJ] sponge metagenome; marine sponge reef 38457 38529 + Ala GGC [ENA] ¢þ
>WENV170957501 MKWU01000036 [MKWU] sponge metagenome; 119944 119872 - Ala GGC [ENA] ¢þ
>WENV170990421 MWWA01005627 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 1373 1299 - Ala GGC [ENA] ¢þ
>W1910913983 NHRY01000277 Alphaproteobacteria Rhodopila globiformis DSM 161 [NHRY] 48459 48384 - Ala GGC [ENA] ¡û
>W1911718249 QQWF01001031 Bacillota Lacticaseibacillus rhamnosus NRRL B-442 [QQWF] 25 100 + Ala GGC [ENA] ¡û
>SRA1013222 SRR020514.76209 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 137 64 - Ala GGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK