tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = TCA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.4311 (12 seq.)
>WENV181308935 OFIU01002280 [OFIU] marine metagenome; seawater 802 897 + SeC TCA [ENA] ¢þ
>WENV181310491 OFIZ01037266 [OFIZ] marine metagenome; seawater 9 104 + SeC TCA [ENA] ¢þ
>WENV181320005 OFKF01008157 [OFKF] marine metagenome; seawater 406 501 + SeC TCA [ENA] ¢þ
>WENV181402878 OFTZ01001176 [OFTZ] marine metagenome; seawater 541 446 - SeC TCA [ENA] ¢þ
>WENV170213697 CEPX01044916 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1726 1821 + SeC TCA [ENA] ¢þ
>WENV170388074 CETZ01043485 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 275 180 - SeC TCA [ENA] ¢þ
>WENV170665236 JYMV01023855 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 7980 8075 + SeC TCA [ENA] ¢þ
>WENV170666947 JYMV01042343 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 3725 3820 + SeC TCA [ENA] ¢þ
>WENV170667145 JYMV01043959 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 6294 6389 + SeC TCA [ENA] ¢þ
>WENV170763386 LWDU01008402 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 280 185 - SeC TCA [ENA] ¢þ
>SRA1013277 SRR020514.113575 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 126 31 - SeC TCA [SRA]
>SRA1013309 SRR020514.136321 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 164 69 - SeC TCA [SRA]
Identical group No.5082 (1 seq.)
>SRA1013199 SRR020514.67412 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 244 149 - SeC TCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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