tRNA genes clustered and arranged according to each identical group

Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)

Anticodon = TTG

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.654133 (50 seq.)
>WENV180045413 MOXS02120278 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 756 830 + Gln TTG [ENA] ¢þ
>WENV180046656 MPLT02121106 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 3268 3342 + Gln TTG [ENA] ¢þ
>WENV180051592 MPLU02228001 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 9038 9112 + Gln TTG [ENA] ¢þ
>WENV180054789 MPLV02113511 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 571 497 - Gln TTG [ENA] ¢þ
>WENV180057084 MPLW02078200 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 2987 3061 + Gln TTG [ENA] ¢þ
>WENV180058599 MPLX02063198 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 2619 2545 - Gln TTG [ENA] ¢þ
>WENV180064676 MPLY02015619 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 1776 1850 + Gln TTG [ENA] ¢þ
>WENV180069854 MPLZ02134093 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 1521 1595 + Gln TTG [ENA] ¢þ
>WENV180073924 MPMA02109508 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 1492 1566 + Gln TTG [ENA] ¢þ
>WENV180078680 MPMB02119600 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 1524 1598 + Gln TTG [ENA] ¢þ
>WENV180082698 MPMC02249288 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 5892 5966 + Gln TTG [ENA] ¢þ
>WENV180086124 MPMD02423602 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 425 351 - Gln TTG [ENA] ¢þ
>WENV180089148 MPMF02067586 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 1172 1246 + Gln TTG [ENA] ¢þ
>WENV181313567 OFJG01015564 [OFJG] marine metagenome; seawater 142 216 + Gln TTG [ENA] ¢þ
>WENV181314804 OFJL01003195 [OFJL] marine metagenome; seawater 473 399 - Gln TTG [ENA] ¢þ
>WENV181317585 OFJY01007674 [OFJY] marine metagenome; seawater 227 301 + Gln TTG [ENA] ¢þ
>WENV181403492 OFUB01000492 [OFUB] marine metagenome; seawater 3442 3516 + Gln TTG [ENA] ¢þ
>WENV183798294 PVBE010405883 [PVBE] marine metagenome; water 1368 1294 - Gln TTG [ENA] ¢þ
>WENV183807783 PVBE011231135 [PVBE] marine metagenome; water 153 79 - Gln TTG [ENA] ¢þ
>WENV183811321 PVBE011571176 [PVBE] marine metagenome; water 732 658 - Gln TTG [ENA] ¢þ
>WENV170146100 CENZ01032652 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3406 3480 + Gln TTG [ENA] ¢þ
>WENV170210317 CEPV01187416 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 882 954 + Gln TTG [ENA] ¢þ
>WENV170225435 CEQE01137386 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2139 2213 + Gln TTG [ENA] ¢þ
>WENV170320858 CESR01015129 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 272 - Gln TTG [ENA] ¢þ
>WENV170342049 CETD01069328 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 351 425 + Gln TTG [ENA] ¢þ
>WENV170351539 CETH01154183 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 277 351 + Gln TTG [ENA] ¢þ
>WENV170371480 CETS01014671 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2257 2331 + Gln TTG [ENA] ¢þ
>WENV170392681 CEUB01067076 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 785 859 + Gln TTG [ENA] ¢þ
>WENV170477013 CEVJ01019851 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 355 - Gln TTG [ENA] ¢þ
>WENV170499831 CEVT01199245 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 158 + Gln TTG [ENA] ¢þ
>WENV170504737 CEVV01377356 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3 77 + Gln TTG [ENA] ¢þ
>WENV170534154 CEWO01192578 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 611 + Gln TTG [ENA] ¢þ
>WENV170597995 FUWD010022370 [FUWD] metagenome; unknown 643 569 - Gln TTG [ENA] ¢þ
>WENV170614364 FUWD012831776 [FUWD] metagenome; unknown 1992 2066 + Gln TTG [ENA] ¢þ
>WENV170614365 FUWD012831777 [FUWD] metagenome; unknown 371 445 + Gln TTG [ENA] ¢þ
>WENV170663499 JYMV01006182 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 27799 27873 + Gln TTG [ENA] ¢þ
>WENV170665459 JYMV01026499 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 896 970 + Gln TTG [ENA] ¢þ
>WENV170666079 JYMV01033209 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 7300 7226 - Gln TTG [ENA] ¢þ
>WENV170667386 JYMV01046818 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 7301 7227 - Gln TTG [ENA] ¢þ
>WENV170804225 MDSW01043896 [MDSW] marine metagenome; seawater 1165 1091 - Gln TTG [ENA] ¢þ
>WENV170857766 MDTB01012978 [MDTB] marine metagenome; seawater 3947 4021 + Gln TTG [ENA] ¢þ
>WENV170938025 MDTG01302266 [MDTG] marine metagenome; seawater 2920 2846 - Gln TTG [ENA] ¢þ
>WENV170939164 MDTG01321129 [MDTG] marine metagenome; seawater 1414 1488 + Gln TTG [ENA] ¢þ
>WENV170945081 MDUP01000245 [MDUP] marine metagenome; 85 m water sample from station 6 3676 3602 - Gln TTG [ENA] ¢þ
>WENV170946648 MDUS01001191 [MDUS] marine metagenome; 300 m water sample from station 6 1156 1230 + Gln TTG [ENA] ¢þ
>W1810515304 QBXB01000001 Unclassified SAR324 cluster bacterium AG-319-I22 [QBXB] 10260 10334 + Gln TTG [ENA] ¡û
>W1810526636 QCPS01000004 Unclassified SAR324 cluster bacterium AG-439-C09 [QCPS] 52753 52679 - Gln TTG [ENA] ¡û
>SRA1008877 SRR020491.49698 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 151 77 - Gln TTG [SRA]
>SRA1009645 SRR020491.309987 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 151 77 - Gln TTG [SRA]
>SRA1013174 SRR020514.56490 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 46 120 + Gln TTG [SRA]
Identical group No.781462 (6 seq.)
>WENV183803008 PVBE010805437 [PVBE] marine metagenome; water 285 214 - Gln TTG [ENA] ¢þ
>WENV170393566 CEUB01200941 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1644 1573 - Gln TTG [ENA] ¢þ
>WENV170394201 CEUC01015277 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 15277 15348 + Gln TTG [ENA] ¢þ
>WENV170824623 MDSY01079131 [MDSY] marine metagenome; seawater 3988 4059 + Gln TTG [ENA] ¢þ
>WENV170878943 MDTC01086520 [MDTC] marine metagenome; seawater 642 713 + Gln TTG [ENA] ¢þ
>SRA1013371 SRR020514.163776 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 110 183 + Gln TTG [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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