tRNA genes clustered and arranged according to each identical group

Plant

Anticodon = CTT

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462872 (20 seq.)
>WENV181314477 OFJK01003625 [OFJK] marine metagenome; seawater 315 388 + Lys CTT [ENA] ¢þ
>WENV170659731 JXWR01056084 [JXWR] soil metagenome; rice field; ambient CO2 73 1 - Lys CTT [ENA] ¢þ
>WENV170659812 JXWR01136597 [JXWR] soil metagenome; rice field; ambient CO2 346 418 + Lys CTT [ENA] ¢þ
>WENV170659955 JXWS01055810 [JXWS] soil metagenome; rice field; elevated CO2 256 330 + Lys CTT [ENA] ¢þ
>R05100021 AP008207 Plant Oryza sativa Japonica Group 31952926 31953001 + Lys CTT [RAP-DB] ¡û
>R05100034 AP008207 Plant Oryza sativa Japonica Group 37844893 37844968 + Lys CTT [RAP-DB] ¡û
>R05100044 AP008207 Plant Oryza sativa Japonica Group 44968283 44968360 + Lys CTT [RAP-DB] ¡û
>R05100099 AP008217 Plant Oryza sativa Japonica Group 31024107 31024182 + Lys CTT [RAP-DB] ¡û
>R05100144 AP008218 Plant Oryza sativa Japonica Group 23972021 23971946 - Lys CTT [RAP-DB] ¡û
>R05100241 AP008209 Plant Oryza sativa Japonica Group 17510980 17511055 + Lys CTT [RAP-DB] ¡û
>R05100400 AP008211 Plant Oryza sativa Japonica Group 26510265 26510190 - Lys CTT [RAP-DB] ¡û
>R05100401 AP008211 Plant Oryza sativa Japonica Group 26012851 26012776 - Lys CTT [RAP-DB] ¡û
>R05100415 AP008211 Plant Oryza sativa Japonica Group 16377382 16377307 - Lys CTT [RAP-DB] ¡û
>R05100504 AP008214 Plant Oryza sativa Japonica Group 19723672 19723747 + Lys CTT [RAP-DB] ¡û
>R05100505 AP008214 Plant Oryza sativa Japonica Group 19734548 19734623 + Lys CTT [RAP-DB] ¡û
>R05100506 AP008214 Plant Oryza sativa Japonica Group 19966037 19966112 + Lys CTT [RAP-DB] ¡û
>R05100535 AP008215 Plant Oryza sativa Japonica Group 13406475 13406550 + Lys CTT [RAP-DB] ¡û
>R05100555 AP008215 Plant Oryza sativa Japonica Group 11490408 11490333 - Lys CTT [RAP-DB] ¡û
>R05100587 AP008216 Plant Oryza sativa Japonica Group 21626237 21626162 - Lys CTT [RAP-DB] ¡û
>R05100594 AP008216 Plant Oryza sativa Japonica Group 17261396 17261321 - Lys CTT [RAP-DB] ¡û
Identical group No.530767 (2 seq.)
>WENV180798249 ODJB01376837 [ODJB] human metagenome; G_DNA_Supragingival plaque 151 223 + Lys CTT [ENA] ¢þ
>AD01000252 NC_003074 Plant Arabidopsis thaliana 5632852 5632925 + Lys CTT [TAIR] ¡û
Identical group No.536281 (20 seq.)
>WENV181320279 OFKG01006291 [OFKG] marine metagenome; seawater 724 650 - Lys CTT [ENA] ¢þ
>WENV170481693 CEVL01319056 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 795 723 - Lys CTT [ENA] ¢þ
>WENV170501464 CEVU01122068 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 666 592 - Lys CTT [ENA] ¢þ
>WENV170660068 JXWS01127334 [JXWS] soil metagenome; rice field; elevated CO2 111 39 - Lys CTT [ENA] ¢þ
>AD01000003 NC_003070 Plant Arabidopsis thaliana 604402 604474 + Lys CTT [TAIR] ¡û
>AD01000023 NC_003070 Plant Arabidopsis thaliana 7016516 7016589 + Lys CTT [TAIR] ¡û
>AD01000061 NC_003070 Plant Arabidopsis thaliana 17731840 17731914 + Lys CTT [TAIR] ¡û
>AD01000142 NC_003070 Plant Arabidopsis thaliana 5518134 5518062 - Lys CTT [TAIR] ¡û
>AD01000155 NC_003070 Plant Arabidopsis thaliana 309347 309275 - Lys CTT [TAIR] ¡û
>AD01000202 NC_003071 Plant Arabidopsis thaliana 18703678 18703750 + Lys CTT [TAIR] ¡û
>AD01000260 NC_003074 Plant Arabidopsis thaliana 11959167 11959240 + Lys CTT [TAIR] ¡û
>AD01000290 NC_003074 Plant Arabidopsis thaliana 22470313 22470241 - Lys CTT [TAIR] ¡û
>AD01000293 NC_003074 Plant Arabidopsis thaliana 20813589 20813517 - Lys CTT [TAIR] ¡û
>AD01000315 NC_003075 Plant Arabidopsis thaliana 33800 33872 + Lys CTT [TAIR] ¡û
>AD01000322 NC_003075 Plant Arabidopsis thaliana 7256415 7256487 + Lys CTT [TAIR] ¡û
>AD01000325 NC_003075 Plant Arabidopsis thaliana 8979656 8979729 + Lys CTT [TAIR] ¡û
>AD01000366 NC_003075 Plant Arabidopsis thaliana 11954813 11954741 - Lys CTT [TAIR] ¡û
>AD01000392 NC_003076 Plant Arabidopsis thaliana 4530474 4530546 + Lys CTT [TAIR] ¡û
>AD01000478 NC_003076 Plant Arabidopsis thaliana 508502 508430 - Lys CTT [TAIR] ¡û
>WENV032577 AACY021455279 Marine microbial communities from Global Ocean Sampling (GOS) 590 515 - Lys CTT [ENA]
Identical group No.541271 (1 seq.)
>AD01000364 NC_003075 Plant Arabidopsis thaliana 13006306 13006234 - Lys CTT [TAIR] ¡û
Identical group No.604542 (1 seq.)
>R05100136 AP008218 Plant Oryza sativa Japonica Group 23647958 23648033 + Lys CTT [RAP-DB] ¡û
Identical group No.641891 (1 seq.)
>R05100588 AP008216 Plant Oryza sativa Japonica Group 21626004 21625929 - Lys CTT [RAP-DB] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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